BLASTX nr result

ID: Sinomenium21_contig00029108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00029108
         (484 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006845025.1| hypothetical protein AMTR_s00058p00214320 [A...    80   4e-13
ref|XP_006830648.1| hypothetical protein AMTR_s05463p00002220, p...    44   1e-05

>ref|XP_006845025.1| hypothetical protein AMTR_s00058p00214320 [Amborella trichopoda]
           gi|548847516|gb|ERN06700.1| hypothetical protein
           AMTR_s00058p00214320 [Amborella trichopoda]
          Length = 76

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 42/64 (65%), Positives = 48/64 (75%)
 Frame = +1

Query: 1   PESKGELLHLSPRDTIRYLNRLKESEEAATLPAQPTGKPLPAGGVRP*RNYM*RIKQDGS 180
           PESKGELLHLSPRDTI YLNRLKESEEAA L +QPTG PLPAG     ++   R+ Q   
Sbjct: 13  PESKGELLHLSPRDTIWYLNRLKESEEAARLLSQPTGNPLPAGAWNAPQSESNRMGQGEV 72

Query: 181 RGDS 192
           RG++
Sbjct: 73  RGET 76


>ref|XP_006830648.1| hypothetical protein AMTR_s05463p00002220, partial [Amborella
           trichopoda] gi|548837187|gb|ERM98064.1| hypothetical
           protein AMTR_s05463p00002220, partial [Amborella
           trichopoda]
          Length = 93

 Score = 43.5 bits (101), Expect(2) = 1e-05
 Identities = 25/36 (69%), Positives = 25/36 (69%)
 Frame = +3

Query: 243 AACAVPSFRIPDRFRH**NGVNHPDLESTSRSSTQG 350
           AACAV S   P       NGVNHPDLESTSRSSTQG
Sbjct: 4   AACAVISDSRPISALVKFNGVNHPDLESTSRSSTQG 39



 Score = 31.6 bits (70), Expect(2) = 1e-05
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = +1

Query: 370 ELGAGAARARPNPTLLYPIVCLSLLGNHEGDFR 468
           ELG  A     + TLL PIVC   LG +E DFR
Sbjct: 47  ELGQPARDQYQSYTLLSPIVCHFFLGKNEADFR 79


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