BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00029027
         (616 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containi...   209   5e-52
ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containi...   189   7e-46
ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containi...   188   9e-46
ref|XP_002320353.2| hypothetical protein POPTR_0014s12660g [Popu...   185   8e-45
ref|XP_006480111.1| PREDICTED: pentatricopeptide repeat-containi...   184   2e-44
ref|XP_004494357.1| PREDICTED: pentatricopeptide repeat-containi...   179   7e-43
ref|XP_007050855.1| Pentatricopeptide repeat superfamily protein...   174   2e-41
ref|XP_006343635.1| PREDICTED: pentatricopeptide repeat-containi...   172   9e-41
ref|XP_004290764.1| PREDICTED: pentatricopeptide repeat-containi...   169   4e-40
ref|XP_004242986.1| PREDICTED: pentatricopeptide repeat-containi...   169   8e-40
ref|XP_003625900.1| Pentatricopeptide repeat-containing protein ...   166   6e-39
ref|XP_006604717.1| PREDICTED: pentatricopeptide repeat-containi...   153   3e-35
gb|EYU46694.1| hypothetical protein MIMGU_mgv1a022667mg, partial...   153   4e-35
ref|XP_007199044.1| hypothetical protein PRUPE_ppa018221mg, part...   146   4e-33
ref|XP_007163088.1| hypothetical protein PHAVU_001G205100g [Phas...   146   5e-33
ref|XP_002875497.1| pentatricopeptide repeat-containing protein ...   114   2e-23
ref|NP_189568.1| pentatricopeptide repeat-containing protein [Ar...   113   4e-23
ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containi...   113   4e-23
ref|XP_004495476.1| PREDICTED: pentatricopeptide repeat-containi...   112   9e-23
ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis th...   112   1e-22

>ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 468

 Score =  209 bits (532), Expect = 5e-52
 Identities = 100/177 (56%), Positives = 122/177 (68%)
 Frame = +3

Query: 84  MRPFSELNSLVTKIPQLLNTCTTSTQLHQIQAQIVLLNLQSNTTITSHFINACQXXXXXX 263
           MRPF  LN  VTK   LL  C +   +HQIQAQ+++ NL SNTTI  HFI ACQ      
Sbjct: 1   MRPFPRLNPRVTKFLNLLTNCCSPCHIHQIQAQLIVQNLHSNTTIAHHFITACQSLGLLD 60

Query: 264 XXXXXFNQIPKPHVFICNSLIRAFSHSHSPQAAISIFTHMRRLSISPNNFTFPFLLKSLS 443
                F    KPHVFICNSLIRAFSH+H+P    SI+THM   SI PNNFTFPFLLKSL+
Sbjct: 61  SALLLFTHHSKPHVFICNSLIRAFSHNHTPHTPFSIYTHMHSNSILPNNFTFPFLLKSLA 120

Query: 444 DLKRLNHGQSVHTQIIKSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPDVVS 614
           D K L+ GQ +HT ++K G   DIY+QNSLL++Y+SCG++G+  +VF+EM   DVVS
Sbjct: 121 DFKGLSEGQCIHTHVVKLGQFDDIYVQNSLLNVYASCGDMGLCMRVFDEMPHRDVVS 177


>ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
          Length = 464

 Score =  189 bits (479), Expect = 7e-46
 Identities = 92/178 (51%), Positives = 121/178 (67%), Gaps = 1/178 (0%)
 Frame = +3

Query: 84  MRPF-SELNSLVTKIPQLLNTCTTSTQLHQIQAQIVLLNLQSNTTITSHFINACQXXXXX 260
           MR F ++  +  T+I  +  T  +   + QIQAQ++L NL S+  I  HFIN C      
Sbjct: 1   MRAFGTQFRAESTRILSIFTTSLSPLHIPQIQAQLILQNLHSHPLIAHHFINTCHHLHLL 60

Query: 261 XXXXXXFNQIPKPHVFICNSLIRAFSHSHSPQAAISIFTHMRRLSISPNNFTFPFLLKSL 440
                 F  IPKPHVFICNSLIRAFSHS  P   + ++THM R SISPNN+TFPF+LKSL
Sbjct: 61  GSAFLFFTHIPKPHVFICNSLIRAFSHSKIPHTPLFLYTHMNRNSISPNNYTFPFVLKSL 120

Query: 441 SDLKRLNHGQSVHTQIIKSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPDVVS 614
           +D K L  GQSVHT ++KSGH SD+Y+QN+L+ +Y+SCG++G+  +VF+EM   DVVS
Sbjct: 121 ADFKDLVGGQSVHTHVVKSGHASDLYVQNTLMDVYASCGKMGLCKKVFDEMLHTDVVS 178


>ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
          Length = 464

 Score =  188 bits (478), Expect = 9e-46
 Identities = 92/178 (51%), Positives = 121/178 (67%), Gaps = 1/178 (0%)
 Frame = +3

Query: 84  MRPF-SELNSLVTKIPQLLNTCTTSTQLHQIQAQIVLLNLQSNTTITSHFINACQXXXXX 260
           MR F ++  +  T+I  +  T  +   + QIQAQ++L NL S+  I  HFIN C      
Sbjct: 1   MRAFGTQFRAESTRILTIFTTSLSPLHIPQIQAQLILQNLHSHPLIAHHFINTCHHLHLL 60

Query: 261 XXXXXXFNQIPKPHVFICNSLIRAFSHSHSPQAAISIFTHMRRLSISPNNFTFPFLLKSL 440
                 F  IPKPHVFICNSLIRAFSHS  P   + ++THM R SISPNN+TFPF+LKSL
Sbjct: 61  GSAFLFFTHIPKPHVFICNSLIRAFSHSKIPHTPLFLYTHMNRNSISPNNYTFPFVLKSL 120

Query: 441 SDLKRLNHGQSVHTQIIKSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPDVVS 614
           +D K L  GQSVHT ++KSGH SD+Y+QN+L+ +Y+SCG++G+  +VF+EM   DVVS
Sbjct: 121 ADFKDLVGGQSVHTHVVKSGHASDLYVQNTLMDVYASCGKMGLCKKVFDEMLHTDVVS 178


>ref|XP_002320353.2| hypothetical protein POPTR_0014s12660g [Populus trichocarpa]
           gi|550324072|gb|EEE98668.2| hypothetical protein
           POPTR_0014s12660g [Populus trichocarpa]
          Length = 410

 Score =  185 bits (470), Expect = 8e-45
 Identities = 93/178 (52%), Positives = 118/178 (66%), Gaps = 1/178 (0%)
 Frame = +3

Query: 84  MRPFSELNSLVTKIPQLLNTCTTSTQLHQIQAQIVLLNLQSNTTITSHFINACQXXXXXX 263
           MR F EL+ ++ KI  LLN C + T +HQIQ+QI+L +L SNTT+  HFI A Q      
Sbjct: 1   MRTFQELSPMINKIINLLNKCASPTHIHQIQSQIILHHLHSNTTLAYHFITASQNFSLLR 60

Query: 264 XXXXXF-NQIPKPHVFICNSLIRAFSHSHSPQAAISIFTHMRRLSISPNNFTFPFLLKSL 440
                F   + +PHVFICN+LIRAFS  H P    SI+ HM   SI PNN+TFPFL KSL
Sbjct: 61  SSLPLFFTHLHRPHVFICNTLIRAFSRIHDPHIPYSIYIHMHYNSILPNNYTFPFLFKSL 120

Query: 441 SDLKRLNHGQSVHTQIIKSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPDVVS 614
           SD +     Q VH  +I+ GHL+DIY+QNSLL +Y+SCG +G+  +VF+EMS  DVVS
Sbjct: 121 SDCRDYLKCQCVHAHVIRLGHLNDIYVQNSLLDVYASCGYMGLCREVFDEMSDRDVVS 178


>ref|XP_006480111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Citrus sinensis]
          Length = 466

 Score =  184 bits (466), Expect = 2e-44
 Identities = 88/173 (50%), Positives = 117/173 (67%), Gaps = 1/173 (0%)
 Frame = +3

Query: 99  ELNS-LVTKIPQLLNTCTTSTQLHQIQAQIVLLNLQSNTTITSHFINACQXXXXXXXXXX 275
           +LNS    +I   L TCT+ + +HQIQAQ++L N   N T+ S+FI ACQ          
Sbjct: 7   QLNSPAAERIIYFLTTCTSPSHIHQIQAQLILQNFHCNATVASYFITACQSLNLLNTAHL 66

Query: 276 XFNQIPKPHVFICNSLIRAFSHSHSPQAAISIFTHMRRLSISPNNFTFPFLLKSLSDLKR 455
            F+Q+  PHVF CNSLI+AFSHS  P    SI+THM R  + PNN+TFPF+LKS SD   
Sbjct: 67  LFHQLHVPHVFACNSLIKAFSHSQIPHIPYSIYTHMLRNYVLPNNYTFPFVLKSSSDFME 126

Query: 456 LNHGQSVHTQIIKSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPDVVS 614
              GQ++HT ++K GHL+DIY+QNSLL+LY+SC ++    +VF+EM+Q DVVS
Sbjct: 127 FKQGQAIHTHVVKFGHLNDIYVQNSLLNLYASCHDMDQCRKVFDEMTQRDVVS 179


>ref|XP_004494357.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cicer arietinum]
          Length = 468

 Score =  179 bits (453), Expect = 7e-43
 Identities = 92/177 (51%), Positives = 116/177 (65%), Gaps = 4/177 (2%)
 Frame = +3

Query: 96  SELNSLVTKIPQLLNT-CTTSTQLHQIQAQIVLLNLQSNTTITSHFINACQXXXXXXXXX 272
           + +NSL  ++  LL   C +   + QIQAQI+L NLQSNTTIT HFINA Q         
Sbjct: 2   NNVNSLAERVVTLLKAFCRSENHVKQIQAQIILHNLQSNTTITHHFINASQSHNLLNTVL 61

Query: 273 XXF---NQIPKPHVFICNSLIRAFSHSHSPQAAISIFTHMRRLSISPNNFTFPFLLKSLS 443
             F   +  PKPH+FI NSLIRAFSHSH P   +SI+THM + SI PNNFTFPFL KSLS
Sbjct: 62  PLFFTTSLSPKPHIFIFNSLIRAFSHSHIPHIPLSIYTHMHKNSIFPNNFTFPFLFKSLS 121

Query: 444 DLKRLNHGQSVHTQIIKSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPDVVS 614
           D       Q V+T ++K GH++D+Y+ NSLL +Y+SCG   +  Q+F+EM   DVVS
Sbjct: 122 DSHHFIQAQCVYTHVVKLGHVNDLYVNNSLLDVYASCGRFALCRQLFDEMPYRDVVS 178


>ref|XP_007050855.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508703116|gb|EOX95012.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 456

 Score =  174 bits (440), Expect = 2e-41
 Identities = 87/162 (53%), Positives = 110/162 (67%), Gaps = 1/162 (0%)
 Frame = +3

Query: 132 LLNTCTTSTQLHQIQAQIVLLNLQSNTTITSHFINACQXXXXXXXXXXX-FNQIPKPHVF 308
           ++NTCT+ + +HQIQAQ++L N   N  I  HFIN+C             F   P  HVF
Sbjct: 1   MINTCTSPSHIHQIQAQLILQNHLKNPFIAHHFINSCNSSGLLSHAHTLLFLSKPPAHVF 60

Query: 309 ICNSLIRAFSHSHSPQAAISIFTHMRRLSISPNNFTFPFLLKSLSDLKRLNHGQSVHTQI 488
           I NSLIRAFSHS +P    S++THMR  S+ PNN+TFPFLLKSLSD  +L  GQ V T +
Sbjct: 61  IYNSLIRAFSHSKTPHLPFSLYTHMRNASVMPNNYTFPFLLKSLSDFHQLLKGQMVQTHV 120

Query: 489 IKSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPDVVS 614
           IK GH  DIYIQNSL++LY+S GE+G+  QVF+E+ + DVVS
Sbjct: 121 IKLGHSHDIYIQNSLMNLYASSGEMGLCRQVFDEIPEKDVVS 162


>ref|XP_006343635.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Solanum tuberosum]
          Length = 476

 Score =  172 bits (435), Expect = 9e-41
 Identities = 90/179 (50%), Positives = 124/179 (69%), Gaps = 5/179 (2%)
 Frame = +3

Query: 93  FSELNSLVTKIPQLLN-TCTTSTQLHQIQAQIVLLNLQSNTTITSHFINACQXXXXXXXX 269
           +S+LN++ T+I   LN TC + +Q+ QIQAQI+  NL  NTTI  +FI+  +        
Sbjct: 8   YSQLNNISTQILNFLNKTCISPSQISQIQAQIIHNNLHFNTTIAHNFISVSKSLGLLNSA 67

Query: 270 XXXFNQ-IPKPHVFICNSLIRAFSHSHSP---QAAISIFTHMRRLSISPNNFTFPFLLKS 437
              + + I KPH+FICN+LI+  SHS  P   Q +IS++ HM +  I PNN+T+PF+LKS
Sbjct: 68  YTLYTKLIKKPHIFICNTLIQECSHSEIPVLKQNSISMYVHMHKEGIFPNNYTYPFVLKS 127

Query: 438 LSDLKRLNHGQSVHTQIIKSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPDVVS 614
           LSDLK L  G+SVHT ++K G++ DIY+QNSLL+LY+SCGE+    QVF+EM Q DVVS
Sbjct: 128 LSDLKELKLGKSVHTHVVKWGYVCDIYVQNSLLNLYASCGEIEFCQQVFDEMPQRDVVS 186


>ref|XP_004290764.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Fragaria vesca subsp. vesca]
          Length = 466

 Score =  169 bits (429), Expect = 4e-40
 Identities = 84/174 (48%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
 Frame = +3

Query: 96  SELNSLVTKIPQLLNTCTTSTQLHQIQAQIVLLNLQSNTTITSHFINACQXXXXXXXXXX 275
           S+ N   T++  LL  C+++  + QIQA ++  NL S TT+ S FI+A +          
Sbjct: 2   SQFNVATTRLLSLLPNCSSAAHIAQIQAHLITQNLHSITTVASAFISASKTLNLLHLAHL 61

Query: 276 XF-NQIPKPHVFICNSLIRAFSHSHSPQAAISIFTHMRRLSISPNNFTFPFLLKSLSDLK 452
               Q+P PHVF CNSLIRAFSHSH P   +SI+THM R SI+PNN+TFP L KSL+D +
Sbjct: 62  HILTQLPTPHVFTCNSLIRAFSHSHIPHIPLSIYTHMTRTSIAPNNYTFPILFKSLADFR 121

Query: 453 RLNHGQSVHTQIIKSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPDVVS 614
            L  GQ +HT ++K G  SDIY+ NS L LY+SCG + +  +VF+EM   DVVS
Sbjct: 122 DLRQGQCLHTHVVKLGQWSDIYVLNSALDLYASCGRMDLCRKVFDEMPVRDVVS 175


>ref|XP_004242986.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Solanum lycopersicum]
          Length = 476

 Score =  169 bits (427), Expect = 8e-40
 Identities = 89/181 (49%), Positives = 125/181 (69%), Gaps = 5/181 (2%)
 Frame = +3

Query: 87  RPFSELNSLVTKIPQLLN-TCTTSTQLHQIQAQIVLLNLQSNTTITSHFINACQXXXXXX 263
           + +S+LN++ T+I   LN T  + +Q+ QIQAQI+  NL  NTTI  +FI+  +      
Sbjct: 6   KSYSQLNNISTQILNFLNKTSISPSQISQIQAQIIHNNLHFNTTIAHNFISVSKSLGLFN 65

Query: 264 XXXXXFNQ-IPKPHVFICNSLIRAFSHSHSP---QAAISIFTHMRRLSISPNNFTFPFLL 431
                + + I KPH+FICN+LI+  SHS  P   Q +IS++ HM + SI PNN+T+PF+L
Sbjct: 66  SAYTLYTKLIKKPHIFICNTLIQECSHSEIPVLKQNSISMYVHMHKESIFPNNYTYPFVL 125

Query: 432 KSLSDLKRLNHGQSVHTQIIKSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPDVV 611
           KSLSDLK L  G+SVHT ++K G++ DIY+QNSLL+LY+SCGE+    QVF+EM + DVV
Sbjct: 126 KSLSDLKELKLGKSVHTHVVKWGYVCDIYVQNSLLNLYASCGEIEFCQQVFDEMPERDVV 185

Query: 612 S 614
           S
Sbjct: 186 S 186


>ref|XP_003625900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500915|gb|AES82118.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 467

 Score =  166 bits (419), Expect = 6e-39
 Identities = 88/173 (50%), Positives = 114/173 (65%), Gaps = 2/173 (1%)
 Frame = +3

Query: 102 LNSLVTKIPQLLNT-CTTSTQLHQIQAQIVLLNLQSNTTITSHFINACQXXXXXXXXXXX 278
           ++ L  ++ +LL + C T   + QIQAQI++ NLQS+TTI  H I A Q           
Sbjct: 5   MSCLAERVVKLLKSFCRTQIHVKQIQAQIIIHNLQSHTTIAEHLITASQSHNLLNYVSPL 64

Query: 279 FNQ-IPKPHVFICNSLIRAFSHSHSPQAAISIFTHMRRLSISPNNFTFPFLLKSLSDLKR 455
           F   IPKPHVFI NSLIRAFSHSH P   +S+++HM + SI PNNFTFPFL KSLSD   
Sbjct: 65  FTHLIPKPHVFIFNSLIRAFSHSHIPNTPLSLYSHMHKNSILPNNFTFPFLFKSLSDSHD 124

Query: 456 LNHGQSVHTQIIKSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPDVVS 614
               Q V+T +IK G+++DIY+ NSLL +Y+S G L +  Q+F+EM Q DVVS
Sbjct: 125 FVQSQCVYTHVIKLGYVNDIYVNNSLLDVYASYGCLELCRQLFDEMPQRDVVS 177


>ref|XP_006604717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Glycine max]
          Length = 464

 Score =  153 bits (387), Expect = 3e-35
 Identities = 74/162 (45%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
 Frame = +3

Query: 132 LLNTCTTSTQLHQIQAQIVLLNLQSNTTITSHFINACQXXXXXXXXXXXFNQI-PKPHVF 308
           L  +C +  Q+ +IQAQ++L  +  NT +  HFI ACQ           F  + P PHV+
Sbjct: 13  LKESCRSQKQVREIQAQLILQKIYPNTRVAQHFIGACQSHGLLNTALVLFTTLLPHPHVY 72

Query: 309 ICNSLIRAFSHSHSPQAAISIFTHMRRLSISPNNFTFPFLLKSLSDLKRLNHGQSVHTQI 488
             N+LIR FS S +P   + I+THMRR S+ PNNFTFP L KSLSD +++   Q V+T +
Sbjct: 73  TFNTLIRVFSQSLTPHTPLFIYTHMRRYSLLPNNFTFPPLFKSLSDTRQVTQAQCVYTHV 132

Query: 489 IKSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPDVVS 614
           +K GH  DIY++NSLL +Y+SCG   +  Q+F+EM   DVVS
Sbjct: 133 LKLGHHQDIYVRNSLLDVYASCGHFALCRQLFDEMLHRDVVS 174


>gb|EYU46694.1| hypothetical protein MIMGU_mgv1a022667mg, partial [Mimulus
           guttatus]
          Length = 454

 Score =  153 bits (386), Expect = 4e-35
 Identities = 79/176 (44%), Positives = 113/176 (64%), Gaps = 3/176 (1%)
 Frame = +3

Query: 96  SELNSLVTKIPQLLNT-CTTSTQLHQIQAQIVLLNLQSNTTITSHFINACQXXXXXXXXX 272
           S   +L  +I  LLNT C T + L QI A I+L NL+ +TT+  HFI AC          
Sbjct: 2   SNPRNLAPRIIHLLNTRCKTRSHLRQILAHIILHNLRPDTTVAPHFIAACHSLNLLSSAA 61

Query: 273 XXF--NQIPKPHVFICNSLIRAFSHSHSPQAAISIFTHMRRLSISPNNFTFPFLLKSLSD 446
                N +  PH F+CN+L++AFSHS +PQ +  I++HM R +I  N+++FPF+LK+L+D
Sbjct: 62  FPLYINNLATPHTFVCNTLLKAFSHSGTPQKSPVIYSHMNRNAIPVNHYSFPFVLKALAD 121

Query: 447 LKRLNHGQSVHTQIIKSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPDVVS 614
           LK +  G SVH QI K G L+D+Y+ NSLL+LY++ G + +  +VF+EM   DVVS
Sbjct: 122 LKLVEEGMSVHAQITKLGFLADVYVGNSLLNLYAAAGNMSLCGKVFDEMLMRDVVS 177


>ref|XP_007199044.1| hypothetical protein PRUPE_ppa018221mg, partial [Prunus persica]
           gi|462394444|gb|EMJ00243.1| hypothetical protein
           PRUPE_ppa018221mg, partial [Prunus persica]
          Length = 372

 Score =  146 bits (369), Expect = 4e-33
 Identities = 71/116 (61%), Positives = 85/116 (73%), Gaps = 6/116 (5%)
 Frame = +3

Query: 285 QIPKPHVFICNSLIRAFSHSHSPQAAI------SIFTHMRRLSISPNNFTFPFLLKSLSD 446
           Q+PKPHVFICNSLIRAFSHSH+P   I      SI+ HM + SI PNNFTFPFLLKSL+D
Sbjct: 7   QLPKPHVFICNSLIRAFSHSHTPHNQIHNHIPLSIYVHMHKSSILPNNFTFPFLLKSLAD 66

Query: 447 LKRLNHGQSVHTQIIKSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPDVVS 614
                 GQ +HT ++K GHL DIY+ NSLL++Y+SCG +    QVF+EM Q DVVS
Sbjct: 67  SHDFKQGQCLHTHVLKLGHLYDIYVHNSLLNVYASCGRMEFCRQVFDEMPQRDVVS 122


>ref|XP_007163088.1| hypothetical protein PHAVU_001G205100g [Phaseolus vulgaris]
           gi|561036552|gb|ESW35082.1| hypothetical protein
           PHAVU_001G205100g [Phaseolus vulgaris]
          Length = 463

 Score =  146 bits (368), Expect = 5e-33
 Identities = 73/162 (45%), Positives = 100/162 (61%), Gaps = 1/162 (0%)
 Frame = +3

Query: 132 LLNTCTTSTQLHQIQAQIVLLNLQSNTTITSHFINACQXXXXXXXXXXXFNQIP-KPHVF 308
           L N C +  Q+ QI+AQ++  NL  NT I  HFI AC            F  +P  PHV+
Sbjct: 12  LQNFCDSQKQVGQIKAQLIRRNLYPNTRIAEHFIGACYSHGLINSALRLFTTLPPSPHVY 71

Query: 309 ICNSLIRAFSHSHSPQAAISIFTHMRRLSISPNNFTFPFLLKSLSDLKRLNHGQSVHTQI 488
           I N+LIR FS S  P   + I++HMRR ++ PNNFTFP L KSLSD + L   + VHT +
Sbjct: 72  IFNTLIRVFSQSRIPHTPLLIYSHMRRNNVLPNNFTFPPLFKSLSDARHLTQARCVHTHV 131

Query: 489 IKSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPDVVS 614
           +K GHL D+++ N+LL +Y+S   +G+   +F+EM Q DVVS
Sbjct: 132 LKLGHLQDLFVGNALLDVYASSRYVGLCRSLFDEMLQRDVVS 173


>ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321335|gb|EFH51756.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 629

 Score =  114 bits (286), Expect = 2e-23
 Identities = 64/164 (39%), Positives = 93/164 (56%), Gaps = 2/164 (1%)
 Frame = +3

Query: 129 QLLNTCTTSTQLHQIQAQIVLLNLQSNTTITSHFINACQXXXXXXXXXXXFNQIPKPHVF 308
           Q L  C    Q+ Q+ AQI+  NL  +  I    I+A             FNQ+ +P+V 
Sbjct: 24  QDLPKCANLNQVKQLHAQIIRRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQEPNVH 83

Query: 309 ICNSLIRAFSHSHSPQAAISIFTHMRRLSISPNNFTFPFLLKSLSDLKRLNHGQSVHTQI 488
           +CNSLIRA + +  P  A  +F+ M+R  +  +NFT+PFLLK+ S L  L   + +H  I
Sbjct: 84  LCNSLIRAHALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGLSWLPVVKMMHNHI 143

Query: 489 IKSGHLSDIYIQNSLLSLYSSCGELGM--SHQVFEEMSQPDVVS 614
            K G  SDIY+ N+L+  YS CG LG+  + ++FE+MS+ D VS
Sbjct: 144 EKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVS 187


>ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g29230 gi|9293916|dbj|BAB01819.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332644032|gb|AEE77553.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 600

 Score =  113 bits (283), Expect = 4e-23
 Identities = 63/164 (38%), Positives = 92/164 (56%), Gaps = 2/164 (1%)
 Frame = +3

Query: 129 QLLNTCTTSTQLHQIQAQIVLLNLQSNTTITSHFINACQXXXXXXXXXXXFNQIPKPHVF 308
           Q L  C    Q+ Q+ AQI+  NL  +  I    I+A             FNQ+ +P+V 
Sbjct: 24  QDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVH 83

Query: 309 ICNSLIRAFSHSHSPQAAISIFTHMRRLSISPNNFTFPFLLKSLSDLKRLNHGQSVHTQI 488
           +CNSLIRA + +  P  A  +F+ M+R  +  +NFT+PFLLK+ S    L   + +H  I
Sbjct: 84  LCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHI 143

Query: 489 IKSGHLSDIYIQNSLLSLYSSCGELGM--SHQVFEEMSQPDVVS 614
            K G  SDIY+ N+L+  YS CG LG+  + ++FE+MS+ D VS
Sbjct: 144 EKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVS 187


>ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 623

 Score =  113 bits (283), Expect = 4e-23
 Identities = 57/161 (35%), Positives = 92/161 (57%)
 Frame = +3

Query: 132 LLNTCTTSTQLHQIQAQIVLLNLQSNTTITSHFINACQXXXXXXXXXXXFNQIPKPHVFI 311
           LL +C TS Q+HQIQAQI+    Q N  IT   +  C            F+QIP P++ +
Sbjct: 44  LLQSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIAL 103

Query: 312 CNSLIRAFSHSHSPQAAISIFTHMRRLSISPNNFTFPFLLKSLSDLKRLNHGQSVHTQII 491
            NS+ R ++ S S +  + +F  M+ + I PN FTFP +LKS   +  L  G+ VH  +I
Sbjct: 104 WNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLI 163

Query: 492 KSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPDVVS 614
           K G   + ++  +L+ +YS+ G +G ++++F EM + +VV+
Sbjct: 164 KCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVA 204



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
 Frame = +3

Query: 279 FNQIPKPHVFICNSLIRAFSHSHSPQAAISIFTHMRRLS-ISPNNFTFPFLLKSLSDLKR 455
           F ++P+ ++F  N+LI  ++H+      +  F  M   S + PN+ T   +L + + L  
Sbjct: 287 FEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGA 346

Query: 456 LNHGQSVHTQIIKSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPDVVS 614
           L+ G+ VH     SG   ++Y+ N+L+ +Y+ CG +  +  VF  M   D++S
Sbjct: 347 LDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLIS 399


>ref|XP_004495476.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Cicer arietinum]
          Length = 557

 Score =  112 bits (280), Expect = 9e-23
 Identities = 59/163 (36%), Positives = 96/163 (58%), Gaps = 2/163 (1%)
 Frame = +3

Query: 132 LLNTCTTSTQLHQIQAQIVLLNLQSNTTITSH--FINACQXXXXXXXXXXXFNQIPKPHV 305
           LL  C +  +L ++ A  +  +L    +  S   + +A             F+Q+  P +
Sbjct: 20  LLGKCKSMLELKKLHAIGISFSLSQEDSFISKILYFSAVSNSGDIDYSYMVFSQLYSPTI 79

Query: 306 FICNSLIRAFSHSHSPQAAISIFTHMRRLSISPNNFTFPFLLKSLSDLKRLNHGQSVHTQ 485
           F  N +IR +S+S SP  ++SIF  M++L ++PN  T+PFL+K+ + L     G S+H Q
Sbjct: 80  FSWNIIIRGYSNSKSPIHSLSIFLKMQQLGVAPNYLTYPFLVKASARLSNQESGVSLHAQ 139

Query: 486 IIKSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPDVVS 614
           IIK+GH SDI+IQNSL+ +Y+SCG +  +H+VF+ M   ++VS
Sbjct: 140 IIKTGHESDIFIQNSLIHMYASCGNIIGAHKVFDSMQGKNLVS 182


>ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
           gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g12770 gi|11994419|dbj|BAB02421.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|332641723|gb|AEE75244.1| mitochondrial editing factor
           22 [Arabidopsis thaliana]
          Length = 694

 Score =  112 bits (279), Expect = 1e-22
 Identities = 53/158 (33%), Positives = 96/158 (60%)
 Frame = +3

Query: 132 LLNTCTTSTQLHQIQAQIVLLNLQSNTTITSHFINACQXXXXXXXXXXXFNQIPKPHVFI 311
           L+++ T   QL QI A++++L LQ +  + +  I+A             F+ +P+P +F 
Sbjct: 27  LIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFP 86

Query: 312 CNSLIRAFSHSHSPQAAISIFTHMRRLSISPNNFTFPFLLKSLSDLKRLNHGQSVHTQII 491
            N++IR +S ++  Q A+ ++++M+   +SP++FTFP LLK+ S L  L  G+ VH Q+ 
Sbjct: 87  WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146

Query: 492 KSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPD 605
           + G  +D+++QN L++LY+ C  LG +  VFE +  P+
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184



 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 37/167 (22%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
 Frame = +3

Query: 126 PQLLNTCTTSTQLHQ---IQAQIVLLNLQSNTTITSHFINACQXXXXXXXXXXXFNQIPK 296
           P LL  C+  + L     + AQ+  L   ++  + +  I               F  +P 
Sbjct: 123 PHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPL 182

Query: 297 PHVFICN--SLIRAFSHSHSPQAAISIFTHMRRLSISPNNFTFPFLLKSLSDLKRLNHGQ 470
           P   I +  +++ A++ +  P  A+ IF+ MR++ + P+      +L + + L+ L  G+
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGR 242

Query: 471 SVHTQIIKSGHLSDIYIQNSLLSLYSSCGELGMSHQVFEEMSQPDVV 611
           S+H  ++K G   +  +  SL ++Y+ CG++  +  +F++M  P+++
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLI 289



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 38/194 (19%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
 Frame = +3

Query: 63  FTQYGQPMRP---FSELNSLVTK-----IPQLLNTCTTSTQLHQ---IQAQIVLLNLQSN 209
           + Q G+PM     FS++  +  K     +  +LN  T    L Q   I A +V + L+  
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256

Query: 210 TTITSHFINACQXXXXXXXXXXXFNQIPKPHVFICNSLIRAFSHSHSPQAAISIFTHMRR 389
             +                    F+++  P++ + N++I  ++ +   + AI +F  M  
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316

Query: 390 LSISPNNFTFPFLLKSLSDLKRLNHGQSVHTQIIKSGHLSDIYIQNSLLSLYSSCGELGM 569
             + P+  +    + + + +  L   +S++  + +S +  D++I ++L+ +++ CG +  
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEG 376

Query: 570 SHQVFEEMSQPDVV 611
           +  VF+     DVV
Sbjct: 377 ARLVFDRTLDRDVV 390