BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00028947
         (423 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...    98   1e-18
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc...    90   4e-16
ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc...    89   8e-16
gb|AGQ44775.1| general transcription factor [Camellia sinensis]        87   3e-15
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]    80   2e-13
ref|NP_175971.3| probable RNA polymerase II transcription factor...    80   3e-13
ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citr...    79   8e-13
ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citr...    79   8e-13
ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transc...    78   1e-12
ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transc...    77   2e-12
ref|XP_002310512.2| transcription factor-related family protein ...    77   3e-12
ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Caps...    75   7e-12
ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab...    75   7e-12
gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus...    70   4e-10
ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutr...    69   7e-10
ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A...    68   1e-09
ref|XP_006393617.1| hypothetical protein EUTSA_v10011448mg [Eutr...    68   1e-09
ref|XP_003573495.1| PREDICTED: probable RNA polymerase II transc...    66   6e-09
ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prun...    64   2e-08
ref|XP_006660062.1| PREDICTED: probable RNA polymerase II transc...    64   2e-08

>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Vitis vinifera]
           gi|296090002|emb|CBI39821.3| unnamed protein product
           [Vitis vinifera]
          Length = 602

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 52/74 (70%), Positives = 55/74 (74%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPMXXXXXXXXXXXXXXXQ 244
           TTYLYTK SRLKDAM+ IYPKLQ IKESVQ+DFRHQVSLLVQPM               Q
Sbjct: 529 TTYLYTKASRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQALDAAFAHYDADQQ 588

Query: 243 KRSARTEERPNGFV 202
           KRSAR+ ERPNGFV
Sbjct: 589 KRSARSGERPNGFV 602


>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Solanum lycopersicum]
          Length = 599

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 48/74 (64%), Positives = 52/74 (70%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPMXXXXXXXXXXXXXXXQ 244
           T Y Y KV+RLKDAM+ IYPKLQ IKESVQ+D RHQVSLLVQPM               Q
Sbjct: 526 TKYFYAKVTRLKDAMSQIYPKLQEIKESVQSDVRHQVSLLVQPMLQALDAAFAHYDADLQ 585

Query: 243 KRSARTEERPNGFV 202
           KRSAR+ ERPNGFV
Sbjct: 586 KRSARSGERPNGFV 599


>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Solanum tuberosum]
          Length = 599

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 47/74 (63%), Positives = 52/74 (70%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPMXXXXXXXXXXXXXXXQ 244
           T Y Y KV+RLKDAM+ IYPKLQ IKESVQ+D RHQVSLLVQPM               Q
Sbjct: 526 TKYFYAKVTRLKDAMSQIYPKLQEIKESVQSDVRHQVSLLVQPMLQALDAAFAHYDADIQ 585

Query: 243 KRSARTEERPNGFV 202
           KRSA++ ERPNGFV
Sbjct: 586 KRSAKSGERPNGFV 599


>gb|AGQ44775.1| general transcription factor [Camellia sinensis]
          Length = 340

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 46/74 (62%), Positives = 52/74 (70%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPMXXXXXXXXXXXXXXXQ 244
           T+YLY KV RLKDAM+ IYPKLQ IKESVQ+DFRHQVSLLVQPM               Q
Sbjct: 267 TSYLYVKVGRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQALDAAFARYDADLQ 326

Query: 243 KRSARTEERPNGFV 202
           KRSA+  +R NG+V
Sbjct: 327 KRSAKGGDRTNGYV 340


>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
          Length = 735

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPM 292
           TTYLYTK SRLKDAM+ IYPKLQ IKESVQ+DFRHQVSLLVQPM
Sbjct: 572 TTYLYTKASRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPM 615


>ref|NP_175971.3| probable RNA polymerase II transcription factor B subunit 1-1
           [Arabidopsis thaliana]
           gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
           Full=Probable RNA polymerase II transcription factor B
           subunit 1-1; AltName: Full=General transcription and DNA
           repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
           Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332195172|gb|AEE33293.1| probable RNA polymerase II
           transcription factor B subunit 1-1 [Arabidopsis
           thaliana]
          Length = 591

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 40/74 (54%), Positives = 53/74 (71%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPMXXXXXXXXXXXXXXXQ 244
           TTYL+TKV +LKDAM++ Y KL+ +KESVQ+D RHQVSLLV+PM               Q
Sbjct: 518 TTYLHTKVGKLKDAMSNTYSKLEAMKESVQSDLRHQVSLLVRPMQQALDAAFHHYEVDLQ 577

Query: 243 KRSARTEERPNGFV 202
           +R+A++ ERPNG+V
Sbjct: 578 RRTAKSGERPNGYV 591


>ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
           gi|557555944|gb|ESR65958.1| hypothetical protein
           CICLE_v10007802mg [Citrus clementina]
          Length = 564

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 39/74 (52%), Positives = 53/74 (71%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPMXXXXXXXXXXXXXXXQ 244
           T YLY+KV+RLKDA+++IYP+L+ +KES+  D RHQVSLLV+PM               Q
Sbjct: 491 TPYLYSKVNRLKDALSNIYPQLEEMKESLPADLRHQVSLLVRPMQQALDAAIQHYDADLQ 550

Query: 243 KRSARTEERPNGFV 202
           KRSA++ E+PNG+V
Sbjct: 551 KRSAKSGEKPNGYV 564


>ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
           gi|557555943|gb|ESR65957.1| hypothetical protein
           CICLE_v10007802mg [Citrus clementina]
          Length = 597

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 39/74 (52%), Positives = 53/74 (71%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPMXXXXXXXXXXXXXXXQ 244
           T YLY+KV+RLKDA+++IYP+L+ +KES+  D RHQVSLLV+PM               Q
Sbjct: 524 TPYLYSKVNRLKDALSNIYPQLEEMKESLPADLRHQVSLLVRPMQQALDAAIQHYDADLQ 583

Query: 243 KRSARTEERPNGFV 202
           KRSA++ E+PNG+V
Sbjct: 584 KRSAKSGEKPNGYV 597


>ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Citrus sinensis]
          Length = 597

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/74 (51%), Positives = 53/74 (71%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPMXXXXXXXXXXXXXXXQ 244
           T YLY+KV+RLKDA+++IYP+L+ +KES+  D RHQVSLLV+PM               Q
Sbjct: 524 TPYLYSKVNRLKDALSNIYPQLEEMKESLPADLRHQVSLLVRPMQQALDAAIQHYDADLQ 583

Query: 243 KRSARTEERPNGFV 202
           KRSA++ E+PNG++
Sbjct: 584 KRSAKSGEKPNGYI 597


>ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Cucumis sativus]
          Length = 729

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 42/73 (57%), Positives = 50/73 (68%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPMXXXXXXXXXXXXXXXQ 244
           T+YLYTKVSRLKDAMA IY +L+ IKE+V  DFRHQVSLLV+PM               Q
Sbjct: 656 TSYLYTKVSRLKDAMAKIYRQLEEIKETVVADFRHQVSLLVRPMHQALDAAFQHHDADMQ 715

Query: 243 KRSARTEERPNGF 205
           KRS ++ ER NG+
Sbjct: 716 KRSVKSGERLNGY 728


>ref|XP_002310512.2| transcription factor-related family protein [Populus trichocarpa]
           gi|550334091|gb|EEE90962.2| transcription factor-related
           family protein [Populus trichocarpa]
          Length = 603

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 41/73 (56%), Positives = 51/73 (69%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPMXXXXXXXXXXXXXXXQ 244
           TTYLYTKVSRLKDAM+ I  +LQ +KESVQ+D RHQV+LL++PM               Q
Sbjct: 530 TTYLYTKVSRLKDAMSKIDSQLQELKESVQSDLRHQVTLLLRPMQQALEAAMQHYDAELQ 589

Query: 243 KRSARTEERPNGF 205
           KRSAR+ +R NG+
Sbjct: 590 KRSARSGDRSNGY 602


>ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Capsella rubella]
           gi|482575779|gb|EOA39966.1| hypothetical protein
           CARUB_v10008654mg [Capsella rubella]
          Length = 593

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 39/76 (51%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPMXXXXXXXXXXXXXXXQ 244
           TTYL+TKV +LKDAM++ Y KL+ +KESVQ+D RHQ+SLLV+PM               Q
Sbjct: 518 TTYLHTKVGKLKDAMSNTYSKLEAMKESVQSDLRHQISLLVRPMQQALDAAFQHYEADLQ 577

Query: 243 KRSARTE--ERPNGFV 202
           +R+A++   ERPNG+V
Sbjct: 578 RRTAKSSGGERPNGYV 593


>ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp.
           lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein
           ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata]
          Length = 592

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 40/75 (53%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPMXXXXXXXXXXXXXXXQ 244
           TTYL+TKV +LKDAM++ Y KL+ +KESVQ+D RHQVSLLV+PM               Q
Sbjct: 518 TTYLHTKVGKLKDAMSNTYSKLEAMKESVQSDLRHQVSLLVRPMQQALDAAFQHYEADLQ 577

Query: 243 KRSART-EERPNGFV 202
           +R+A++  ERPNG+V
Sbjct: 578 RRTAKSGGERPNGYV 592


>gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus guttatus]
          Length = 409

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPM 292
           T YLYTKV+R+KDAM+ IY KLQ IKESV +DFRHQVSLLV PM
Sbjct: 344 TKYLYTKVTRMKDAMSQIYLKLQEIKESVPSDFRHQVSLLVHPM 387


>ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutrema salsugineum]
           gi|557089185|gb|ESQ29893.1| hypothetical protein
           EUTSA_v10011333mg [Eutrema salsugineum]
          Length = 597

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPMXXXXXXXXXXXXXXXQ 244
           TTYL+TKV +LKDAM++ Y +L  +K+SVQ+D RHQVSLLV+PM               Q
Sbjct: 519 TTYLHTKVGKLKDAMSNTYSQLDAMKQSVQSDLRHQVSLLVRPMQQALDAAFQHYETDLQ 578

Query: 243 KRSAR-----TEERPNGFV 202
           +R+A+     + ERPNG V
Sbjct: 579 RRTAKSVGGSSSERPNGGV 597


>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
           gi|548861733|gb|ERN19104.1| hypothetical protein
           AMTR_s00061p00135540 [Amborella trichopoda]
          Length = 626

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 36/66 (54%), Positives = 45/66 (68%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPMXXXXXXXXXXXXXXXQ 244
           TT+L+ KV+R+KDAMA IY KL  +KESVQ++FRHQVSLLV+PM               Q
Sbjct: 533 TTFLHAKVNRVKDAMAQIYRKLPEVKESVQSEFRHQVSLLVKPMLQVLDEAFKHYDAEMQ 592

Query: 243 KRSART 226
           KRS +T
Sbjct: 593 KRSTKT 598


>ref|XP_006393617.1| hypothetical protein EUTSA_v10011448mg [Eutrema salsugineum]
           gi|557090195|gb|ESQ30903.1| hypothetical protein
           EUTSA_v10011448mg [Eutrema salsugineum]
          Length = 478

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/44 (72%), Positives = 40/44 (90%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPM 292
           TTYLYTKV RLKDAM++IY +L+ +KESVQ+D RH+VSLLV+PM
Sbjct: 410 TTYLYTKVLRLKDAMSNIYSQLEVMKESVQSDLRHEVSLLVRPM 453


>ref|XP_003573495.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Brachypodium distachyon]
          Length = 602

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 36/73 (49%), Positives = 44/73 (60%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPMXXXXXXXXXXXXXXXQ 244
           TT LY K+ R+KDAM  IY KLQ IKES Q D RH++S LV+PM               Q
Sbjct: 531 TTVLYNKIQRVKDAMTQIYQKLQDIKESAQPDVRHEISQLVKPMTQALDAAFNHDLEQQQ 590

Query: 243 KRSARTEERPNGF 205
           K S++T  +PNGF
Sbjct: 591 K-SSKTGNKPNGF 602


>ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prunus persica]
           gi|462419824|gb|EMJ24087.1| hypothetical protein
           PRUPE_ppa003591mg [Prunus persica]
          Length = 563

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 40/73 (54%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPMXXXXXXXXXXXXXXXQ 244
           TTYL TKV RLKDAM+ IY +L+ IK   Q+DFRHQVSLLV+PM               Q
Sbjct: 492 TTYLSTKVGRLKDAMSQIYRQLEEIK---QSDFRHQVSLLVRPMHQALDAAFQHFDADLQ 548

Query: 243 KRSART-EERPNG 208
           KR+AR+  E PNG
Sbjct: 549 KRAARSGGETPNG 561


>ref|XP_006660062.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Oryza brachyantha]
          Length = 621

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 35/73 (47%), Positives = 44/73 (60%)
 Frame = -1

Query: 423 TTYLYTKVSRLKDAMADIYPKLQGIKESVQTDFRHQVSLLVQPMXXXXXXXXXXXXXXXQ 244
           T+ LY KV R+KDAM  IY KLQ IKES Q D RH++S LV+PM               Q
Sbjct: 550 TSVLYNKVQRIKDAMTQIYQKLQNIKESAQPDVRHEISQLVKPMTQALDAAFNHELEQQQ 609

Query: 243 KRSARTEERPNGF 205
           K S+++  +PNGF
Sbjct: 610 K-SSKSGNKPNGF 621