BLASTX nr result
ID: Sinomenium21_contig00028946
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00028946
(527 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 159 4e-37
gb|AGQ44775.1| general transcription factor [Camellia sinensis] 150 2e-34
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc... 147 1e-33
ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc... 146 3e-33
ref|NP_175971.3| probable RNA polymerase II transcription factor... 142 6e-32
ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transc... 139 5e-31
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera] 139 5e-31
ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab... 136 3e-30
ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citr... 135 5e-30
ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citr... 135 5e-30
ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transc... 135 6e-30
ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Caps... 135 6e-30
ref|XP_002310512.2| transcription factor-related family protein ... 135 8e-30
ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A... 128 9e-28
ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prun... 127 2e-27
ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutr... 126 3e-27
ref|XP_003573495.1| PREDICTED: probable RNA polymerase II transc... 124 2e-26
gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus... 122 7e-26
dbj|BAK04994.1| predicted protein [Hordeum vulgare subsp. vulgare] 119 3e-25
ref|XP_006660062.1| PREDICTED: probable RNA polymerase II transc... 118 1e-24
>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 [Vitis vinifera]
gi|296090002|emb|CBI39821.3| unnamed protein product
[Vitis vinifera]
Length = 602
Score = 159 bits (402), Expect = 4e-37
Identities = 81/104 (77%), Positives = 84/104 (80%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
LP TKEELLHHWTSIQELL+HFWSSYPITTTYLYTK SRLKDAM+ IYPKLQ IKESVQ
Sbjct: 499 LPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEIKESVQ 558
Query: 346 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXQKRSARAGERPNGFV 215
SDFRHQVSLLVQPM QKRSAR+GERPNGFV
Sbjct: 559 SDFRHQVSLLVQPMLQALDAAFAHYDADQQKRSARSGERPNGFV 602
>gb|AGQ44775.1| general transcription factor [Camellia sinensis]
Length = 340
Score = 150 bits (379), Expect = 2e-34
Identities = 75/104 (72%), Positives = 82/104 (78%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
LP+ TK+ELLHHWTSIQELLKHFWSSYPITT+YLY KV RLKDAM+ IYPKLQ IKESVQ
Sbjct: 237 LPNITKDELLHHWTSIQELLKHFWSSYPITTSYLYVKVGRLKDAMSQIYPKLQEIKESVQ 296
Query: 346 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXQKRSARAGERPNGFV 215
SDFRHQVSLLVQPM QKRSA+ G+R NG+V
Sbjct: 297 SDFRHQVSLLVQPMLQALDAAFARYDADLQKRSAKGGDRTNGYV 340
>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Solanum lycopersicum]
Length = 599
Score = 147 bits (372), Expect = 1e-33
Identities = 76/104 (73%), Positives = 79/104 (75%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
LP TK ELL HWTSIQELLKHFWSSYPITT Y Y KV+RLKDAM+ IYPKLQ IKESVQ
Sbjct: 496 LPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRLKDAMSQIYPKLQEIKESVQ 555
Query: 346 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXQKRSARAGERPNGFV 215
SD RHQVSLLVQPM QKRSAR+GERPNGFV
Sbjct: 556 SDVRHQVSLLVQPMLQALDAAFAHYDADLQKRSARSGERPNGFV 599
>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Solanum tuberosum]
Length = 599
Score = 146 bits (369), Expect = 3e-33
Identities = 75/104 (72%), Positives = 79/104 (75%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
LP TK ELL HWTSIQELLKHFWSSYPITT Y Y KV+RLKDAM+ IYPKLQ IKESVQ
Sbjct: 496 LPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRLKDAMSQIYPKLQEIKESVQ 555
Query: 346 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXQKRSARAGERPNGFV 215
SD RHQVSLLVQPM QKRSA++GERPNGFV
Sbjct: 556 SDVRHQVSLLVQPMLQALDAAFAHYDADIQKRSAKSGERPNGFV 599
>ref|NP_175971.3| probable RNA polymerase II transcription factor B subunit 1-1
[Arabidopsis thaliana]
gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
Full=Probable RNA polymerase II transcription factor B
subunit 1-1; AltName: Full=General transcription and DNA
repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
hypothetical protein [Arabidopsis thaliana]
gi|332195172|gb|AEE33293.1| probable RNA polymerase II
transcription factor B subunit 1-1 [Arabidopsis
thaliana]
Length = 591
Score = 142 bits (357), Expect = 6e-32
Identities = 68/104 (65%), Positives = 82/104 (78%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
LP TK+E+LHHWTSIQELLKHFWSSYPITTTYL+TKV +LKDAM++ Y KL+ +KESVQ
Sbjct: 488 LPKSTKDEVLHHWTSIQELLKHFWSSYPITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQ 547
Query: 346 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXQKRSARAGERPNGFV 215
SD RHQVSLLV+PM Q+R+A++GERPNG+V
Sbjct: 548 SDLRHQVSLLVRPMQQALDAAFHHYEVDLQRRTAKSGERPNGYV 591
>ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Cucumis sativus]
Length = 729
Score = 139 bits (349), Expect = 5e-31
Identities = 70/103 (67%), Positives = 80/103 (77%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
LP+ TKEELLHHW SIQELLKHFWSSYPITT+YLYTKVSRLKDAMA IY +L+ IKE+V
Sbjct: 626 LPNPTKEELLHHWISIQELLKHFWSSYPITTSYLYTKVSRLKDAMAKIYRQLEEIKETVV 685
Query: 346 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXQKRSARAGERPNGF 218
+DFRHQVSLLV+PM QKRS ++GER NG+
Sbjct: 686 ADFRHQVSLLVRPMHQALDAAFQHHDADMQKRSVKSGERLNGY 728
>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
Length = 735
Score = 139 bits (349), Expect = 5e-31
Identities = 67/74 (90%), Positives = 69/74 (93%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
LP TKEELLHHWTSIQELL+HFWSSYPITTTYLYTK SRLKDAM+ IYPKLQ IKESVQ
Sbjct: 542 LPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEIKESVQ 601
Query: 346 SDFRHQVSLLVQPM 305
SDFRHQVSLLVQPM
Sbjct: 602 SDFRHQVSLLVQPM 615
>ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp.
lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein
ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata]
Length = 592
Score = 136 bits (342), Expect = 3e-30
Identities = 67/105 (63%), Positives = 82/105 (78%), Gaps = 1/105 (0%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
LP TK+E+LHHWTSIQELL+HFWSSYPITTTYL+TKV +LKDAM++ Y KL+ +KESVQ
Sbjct: 488 LPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQ 547
Query: 346 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXQKRSARA-GERPNGFV 215
SD RHQVSLLV+PM Q+R+A++ GERPNG+V
Sbjct: 548 SDLRHQVSLLVRPMQQALDAAFQHYEADLQRRTAKSGGERPNGYV 592
>ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
gi|557555944|gb|ESR65958.1| hypothetical protein
CICLE_v10007802mg [Citrus clementina]
Length = 564
Score = 135 bits (341), Expect = 5e-30
Identities = 65/104 (62%), Positives = 82/104 (78%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
LP TKE+LL+HW SIQELLKHFWSSYPITT YLY+KV+RLKDA+++IYP+L+ +KES+
Sbjct: 461 LPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQLEEMKESLP 520
Query: 346 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXQKRSARAGERPNGFV 215
+D RHQVSLLV+PM QKRSA++GE+PNG+V
Sbjct: 521 ADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNGYV 564
>ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
gi|557555943|gb|ESR65957.1| hypothetical protein
CICLE_v10007802mg [Citrus clementina]
Length = 597
Score = 135 bits (341), Expect = 5e-30
Identities = 65/104 (62%), Positives = 82/104 (78%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
LP TKE+LL+HW SIQELLKHFWSSYPITT YLY+KV+RLKDA+++IYP+L+ +KES+
Sbjct: 494 LPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQLEEMKESLP 553
Query: 346 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXQKRSARAGERPNGFV 215
+D RHQVSLLV+PM QKRSA++GE+PNG+V
Sbjct: 554 ADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNGYV 597
>ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Citrus sinensis]
Length = 597
Score = 135 bits (340), Expect = 6e-30
Identities = 64/104 (61%), Positives = 82/104 (78%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
LP TKE+LL+HW SIQELLKHFWSSYPITT YLY+KV+RLKDA+++IYP+L+ +KES+
Sbjct: 494 LPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQLEEMKESLP 553
Query: 346 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXQKRSARAGERPNGFV 215
+D RHQVSLLV+PM QKRSA++GE+PNG++
Sbjct: 554 ADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNGYI 597
>ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Capsella rubella]
gi|482575779|gb|EOA39966.1| hypothetical protein
CARUB_v10008654mg [Capsella rubella]
Length = 593
Score = 135 bits (340), Expect = 6e-30
Identities = 66/106 (62%), Positives = 82/106 (77%), Gaps = 2/106 (1%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
LP TK+E+LHHWTSIQELL+HFWSSYPITTTYL+TKV +LKDAM++ Y KL+ +KESVQ
Sbjct: 488 LPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQ 547
Query: 346 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXQKRSARA--GERPNGFV 215
SD RHQ+SLLV+PM Q+R+A++ GERPNG+V
Sbjct: 548 SDLRHQISLLVRPMQQALDAAFQHYEADLQRRTAKSSGGERPNGYV 593
>ref|XP_002310512.2| transcription factor-related family protein [Populus trichocarpa]
gi|550334091|gb|EEE90962.2| transcription factor-related
family protein [Populus trichocarpa]
Length = 603
Score = 135 bits (339), Expect = 8e-30
Identities = 67/103 (65%), Positives = 80/103 (77%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
LP+ KEELL+HWTS+QELLKH+WSSYPITTTYLYTKVSRLKDAM+ I +LQ +KESVQ
Sbjct: 500 LPNTIKEELLYHWTSLQELLKHYWSSYPITTTYLYTKVSRLKDAMSKIDSQLQELKESVQ 559
Query: 346 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXQKRSARAGERPNGF 218
SD RHQV+LL++PM QKRSAR+G+R NG+
Sbjct: 560 SDLRHQVTLLLRPMQQALEAAMQHYDAELQKRSARSGDRSNGY 602
>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
gi|548861733|gb|ERN19104.1| hypothetical protein
AMTR_s00061p00135540 [Amborella trichopoda]
Length = 626
Score = 128 bits (321), Expect = 9e-28
Identities = 59/74 (79%), Positives = 68/74 (91%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
LPHRTKEELL HWTSIQELL+HFWSSYP+TTT+L+ KV+R+KDAMA IY KL +KESVQ
Sbjct: 503 LPHRTKEELLQHWTSIQELLRHFWSSYPLTTTFLHAKVNRVKDAMAQIYRKLPEVKESVQ 562
Query: 346 SDFRHQVSLLVQPM 305
S+FRHQVSLLV+PM
Sbjct: 563 SEFRHQVSLLVKPM 576
>ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prunus persica]
gi|462419824|gb|EMJ24087.1| hypothetical protein
PRUPE_ppa003591mg [Prunus persica]
Length = 563
Score = 127 bits (318), Expect = 2e-27
Identities = 68/103 (66%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
LP++TKEELLHHW SIQELL+HFWSSYPITTTYL TKV RLKDAM+ IY +L+ IK Q
Sbjct: 462 LPNKTKEELLHHWISIQELLRHFWSSYPITTTYLSTKVGRLKDAMSQIYRQLEEIK---Q 518
Query: 346 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXQKRSARA-GERPNG 221
SDFRHQVSLLV+PM QKR+AR+ GE PNG
Sbjct: 519 SDFRHQVSLLVRPMHQALDAAFQHFDADLQKRAARSGGETPNG 561
>ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutrema salsugineum]
gi|557089185|gb|ESQ29893.1| hypothetical protein
EUTSA_v10011333mg [Eutrema salsugineum]
Length = 597
Score = 126 bits (317), Expect = 3e-27
Identities = 64/109 (58%), Positives = 79/109 (72%), Gaps = 5/109 (4%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
LP TK+E+LHHWTSIQELL+HFWSSYPITTTYL+TKV +LKDAM++ Y +L +K+SVQ
Sbjct: 489 LPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSQLDAMKQSVQ 548
Query: 346 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXQKRSAR-----AGERPNGFV 215
SD RHQVSLLV+PM Q+R+A+ + ERPNG V
Sbjct: 549 SDLRHQVSLLVRPMQQALDAAFQHYETDLQRRTAKSVGGSSSERPNGGV 597
>ref|XP_003573495.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Brachypodium distachyon]
Length = 602
Score = 124 bits (310), Expect = 2e-26
Identities = 60/103 (58%), Positives = 73/103 (70%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
LPHRT++EL+ HWT+IQELL+HFWSSYPITTT LY K+ R+KDAM IY KLQ IKES Q
Sbjct: 501 LPHRTRDELMDHWTAIQELLRHFWSSYPITTTVLYNKIQRVKDAMTQIYQKLQDIKESAQ 560
Query: 346 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXQKRSARAGERPNGF 218
D RH++S LV+PM QK S++ G +PNGF
Sbjct: 561 PDVRHEISQLVKPMTQALDAAFNHDLEQQQK-SSKTGNKPNGF 602
>gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus guttatus]
Length = 409
Score = 122 bits (305), Expect = 7e-26
Identities = 59/74 (79%), Positives = 64/74 (86%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
LP TK+ELL WTS+QELLKHFWSSYPITT YLYTKV+R+KDAM+ IY KLQ IKESV
Sbjct: 314 LPKSTKDELLIQWTSVQELLKHFWSSYPITTKYLYTKVTRMKDAMSQIYLKLQEIKESVP 373
Query: 346 SDFRHQVSLLVQPM 305
SDFRHQVSLLV PM
Sbjct: 374 SDFRHQVSLLVHPM 387
>dbj|BAK04994.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 119 bits (299), Expect = 3e-25
Identities = 60/103 (58%), Positives = 72/103 (69%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
LPHRT++EL+ HW +IQELL+HFWSSYPITTT L KV RLK+AM IY KLQ IKES Q
Sbjct: 495 LPHRTRDELMDHWMAIQELLRHFWSSYPITTTVLCNKVQRLKEAMTQIYQKLQDIKESAQ 554
Query: 346 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXQKRSARAGERPNGF 218
D RH++S LV+PM QK S++AG +PNGF
Sbjct: 555 PDVRHEISQLVKPMTQALDAAFNHEHDQQQK-SSKAGSKPNGF 596
>ref|XP_006660062.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Oryza brachyantha]
Length = 621
Score = 118 bits (295), Expect = 1e-24
Identities = 57/103 (55%), Positives = 72/103 (69%)
Frame = -2
Query: 526 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 347
+P T++EL+ HWT+IQELL+HFWSSYPITT+ LY KV R+KDAM IY KLQ IKES Q
Sbjct: 520 IPRHTRDELMDHWTAIQELLRHFWSSYPITTSVLYNKVQRIKDAMTQIYQKLQNIKESAQ 579
Query: 346 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXQKRSARAGERPNGF 218
D RH++S LV+PM QK S+++G +PNGF
Sbjct: 580 PDVRHEISQLVKPMTQALDAAFNHELEQQQK-SSKSGNKPNGF 621