BLASTX nr result
ID: Sinomenium21_contig00028903
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00028903
(499 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006853102.1| hypothetical protein AMTR_s00038p00125360 [A... 96 5e-18
ref|XP_002525464.1| RNA binding protein, putative [Ricinus commu... 95 1e-17
ref|XP_007030223.1| RNA-binding family protein isoform 6 [Theobr... 90 4e-16
ref|XP_007030221.1| RNA-binding family protein isoform 4 [Theobr... 90 4e-16
ref|XP_007030218.1| RNA-binding family protein isoform 1 [Theobr... 90 4e-16
ref|XP_006650019.1| PREDICTED: RNA-binding protein 40-like [Oryz... 89 5e-16
ref|NP_001049993.1| Os03g0326600 [Oryza sativa Japonica Group] g... 89 5e-16
ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Viti... 89 6e-16
ref|XP_003624600.1| RNA-binding protein [Medicago truncatula] gi... 88 1e-15
ref|XP_004493140.1| PREDICTED: RNA-binding protein 40-like isofo... 88 1e-15
ref|XP_004493139.1| PREDICTED: RNA-binding protein 40-like isofo... 88 1e-15
ref|XP_006359619.1| PREDICTED: RNA-binding protein 40-like isofo... 87 2e-15
ref|XP_002465331.1| hypothetical protein SORBIDRAFT_01g036600 [S... 87 3e-15
ref|XP_004984515.1| PREDICTED: RNA-binding protein 40-like [Seta... 86 4e-15
ref|XP_006479054.1| PREDICTED: RNA-binding protein 40-like isofo... 86 7e-15
ref|XP_006443354.1| hypothetical protein CICLE_v10020067mg [Citr... 86 7e-15
tpg|DAA45145.1| TPA: hypothetical protein ZEAMMB73_529929 [Zea m... 85 9e-15
ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ... 85 9e-15
emb|CBI36673.3| unnamed protein product [Vitis vinifera] 85 9e-15
ref|NP_001132325.1| hypothetical protein [Zea mays] gi|194694084... 85 9e-15
>ref|XP_006853102.1| hypothetical protein AMTR_s00038p00125360 [Amborella trichopoda]
gi|548856741|gb|ERN14569.1| hypothetical protein
AMTR_s00038p00125360 [Amborella trichopoda]
Length = 471
Score = 95.9 bits (237), Expect = 5e-18
Identities = 51/82 (62%), Positives = 56/82 (68%)
Frame = +3
Query: 252 SQLHVDSQMQPSKPFLDESQSQATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLR 431
+ L+ Q QP F E ++ ATLLVRHLPEAIPHETLS LFSHYGASSVRPCAGGRLR
Sbjct: 5 ASLNPTPQPQPLGTFNGEEKT-ATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLR 63
Query: 432 NCAFVDFNSEXXXXXXXXXXNR 497
N AFVDF + NR
Sbjct: 64 NAAFVDFKDDVLASQAQSQLNR 85
>ref|XP_002525464.1| RNA binding protein, putative [Ricinus communis]
gi|223535277|gb|EEF36954.1| RNA binding protein,
putative [Ricinus communis]
Length = 450
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/53 (81%), Positives = 48/53 (90%)
Frame = +3
Query: 303 ESQSQATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLRNCAFVDFNSE 461
ES + +TLL+RHLPEAIPHETLS LFSHYGA+SVRPCAGGRL NCAFVDF +E
Sbjct: 4 ESAAVSTLLIRHLPEAIPHETLSRLFSHYGATSVRPCAGGRLTNCAFVDFKNE 56
>ref|XP_007030223.1| RNA-binding family protein isoform 6 [Theobroma cacao]
gi|508718828|gb|EOY10725.1| RNA-binding family protein
isoform 6 [Theobroma cacao]
Length = 436
Score = 89.7 bits (221), Expect = 4e-16
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +3
Query: 303 ESQSQATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLRNCAFVDFNSE 461
E +S TLL+RHLPEAIPH+TL LFSHYGASSVRPC+ G+LRNCAFVDF +E
Sbjct: 32 ELESVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLRNCAFVDFKNE 84
>ref|XP_007030221.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508718826|gb|EOY10723.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 487
Score = 89.7 bits (221), Expect = 4e-16
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +3
Query: 303 ESQSQATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLRNCAFVDFNSE 461
E +S TLL+RHLPEAIPH+TL LFSHYGASSVRPC+ G+LRNCAFVDF +E
Sbjct: 32 ELESVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLRNCAFVDFKNE 84
>ref|XP_007030218.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590641397|ref|XP_007030219.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590641400|ref|XP_007030220.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508718823|gb|EOY10720.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508718824|gb|EOY10721.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508718825|gb|EOY10722.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 479
Score = 89.7 bits (221), Expect = 4e-16
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +3
Query: 303 ESQSQATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLRNCAFVDFNSE 461
E +S TLL+RHLPEAIPH+TL LFSHYGASSVRPC+ G+LRNCAFVDF +E
Sbjct: 32 ELESVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLRNCAFVDFKNE 84
>ref|XP_006650019.1| PREDICTED: RNA-binding protein 40-like [Oryza brachyantha]
Length = 460
Score = 89.4 bits (220), Expect = 5e-16
Identities = 43/60 (71%), Positives = 45/60 (75%)
Frame = +3
Query: 318 ATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLRNCAFVDFNSEXXXXXXXXXXNR 497
ATLLVRHLPEAIP E LS LFSHYGA+SVRPCAGG+LRNCAFVDF E NR
Sbjct: 36 ATLLVRHLPEAIPQEMLSRLFSHYGATSVRPCAGGKLRNCAFVDFRDEVAASQAQSLLNR 95
>ref|NP_001049993.1| Os03g0326600 [Oryza sativa Japonica Group]
gi|108707928|gb|ABF95723.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|113548464|dbj|BAF11907.1| Os03g0326600 [Oryza sativa
Japonica Group] gi|218192743|gb|EEC75170.1| hypothetical
protein OsI_11395 [Oryza sativa Indica Group]
Length = 467
Score = 89.4 bits (220), Expect = 5e-16
Identities = 43/60 (71%), Positives = 45/60 (75%)
Frame = +3
Query: 318 ATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLRNCAFVDFNSEXXXXXXXXXXNR 497
ATLLVRHLPEAIP E LS LFSHYGA+SVRPCAGG+LRNCAFVDF E NR
Sbjct: 43 ATLLVRHLPEAIPQEMLSRLFSHYGATSVRPCAGGKLRNCAFVDFRDEVVASQAQSLLNR 102
>ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Vitis vinifera]
gi|298205172|emb|CBI17231.3| unnamed protein product
[Vitis vinifera]
Length = 463
Score = 89.0 bits (219), Expect = 6e-16
Identities = 42/60 (70%), Positives = 46/60 (76%)
Frame = +3
Query: 282 PSKPFLDESQSQATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLRNCAFVDFNSE 461
P + +S ATLL+RHLPEAIP +TLS LFS YGASSVRPC GRLRNCAFVDF SE
Sbjct: 9 PRTQSFEAEKSAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPCTSGRLRNCAFVDFKSE 68
>ref|XP_003624600.1| RNA-binding protein [Medicago truncatula]
gi|355499615|gb|AES80818.1| RNA-binding protein
[Medicago truncatula]
Length = 492
Score = 88.2 bits (217), Expect = 1e-15
Identities = 38/51 (74%), Positives = 46/51 (90%)
Frame = +3
Query: 309 QSQATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLRNCAFVDFNSE 461
+S ATLL++HLP+AIPH+TLS L SHYGASSVRPC+ GRLRNCAFVDF ++
Sbjct: 23 ESPATLLIKHLPDAIPHDTLSRLLSHYGASSVRPCSAGRLRNCAFVDFKND 73
>ref|XP_004493140.1| PREDICTED: RNA-binding protein 40-like isoform X2 [Cicer arietinum]
Length = 439
Score = 87.8 bits (216), Expect = 1e-15
Identities = 38/51 (74%), Positives = 46/51 (90%)
Frame = +3
Query: 309 QSQATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLRNCAFVDFNSE 461
+S ATLL++HLP+AIPH+TLS L SHYGASSVRPC+ GRLRNCAFVDF ++
Sbjct: 23 ESSATLLIKHLPDAIPHDTLSRLLSHYGASSVRPCSRGRLRNCAFVDFKND 73
>ref|XP_004493139.1| PREDICTED: RNA-binding protein 40-like isoform X1 [Cicer arietinum]
Length = 459
Score = 87.8 bits (216), Expect = 1e-15
Identities = 38/51 (74%), Positives = 46/51 (90%)
Frame = +3
Query: 309 QSQATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLRNCAFVDFNSE 461
+S ATLL++HLP+AIPH+TLS L SHYGASSVRPC+ GRLRNCAFVDF ++
Sbjct: 23 ESSATLLIKHLPDAIPHDTLSRLLSHYGASSVRPCSRGRLRNCAFVDFKND 73
>ref|XP_006359619.1| PREDICTED: RNA-binding protein 40-like isoform X1 [Solanum
tuberosum] gi|565387688|ref|XP_006359620.1| PREDICTED:
RNA-binding protein 40-like isoform X2 [Solanum
tuberosum] gi|565387690|ref|XP_006359621.1| PREDICTED:
RNA-binding protein 40-like isoform X3 [Solanum
tuberosum] gi|565387692|ref|XP_006359622.1| PREDICTED:
RNA-binding protein 40-like isoform X4 [Solanum
tuberosum] gi|565387694|ref|XP_006359623.1| PREDICTED:
RNA-binding protein 40-like isoform X5 [Solanum
tuberosum] gi|565387696|ref|XP_006359624.1| PREDICTED:
RNA-binding protein 40-like isoform X6 [Solanum
tuberosum]
Length = 452
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/61 (63%), Positives = 48/61 (78%)
Frame = +3
Query: 279 QPSKPFLDESQSQATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLRNCAFVDFNS 458
QP+ + E ++TLL+RHLPEAIPHETLS L S+YGA+S+RPC GR+RNCAFVDF
Sbjct: 11 QPAYHWPMEEVKESTLLIRHLPEAIPHETLSRLLSNYGATSIRPCTSGRMRNCAFVDFKD 70
Query: 459 E 461
E
Sbjct: 71 E 71
>ref|XP_002465331.1| hypothetical protein SORBIDRAFT_01g036600 [Sorghum bicolor]
gi|241919185|gb|EER92329.1| hypothetical protein
SORBIDRAFT_01g036600 [Sorghum bicolor]
Length = 467
Score = 86.7 bits (213), Expect = 3e-15
Identities = 45/79 (56%), Positives = 49/79 (62%)
Frame = +3
Query: 261 HVDSQMQPSKPFLDESQSQATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLRNCA 440
H Q P+ P ATLLVRHLPEAI E LS LFSHYGA+SVRPC+GG+LRNCA
Sbjct: 30 HHQQQQGPAPP------GAATLLVRHLPEAITQEMLSRLFSHYGATSVRPCSGGKLRNCA 83
Query: 441 FVDFNSEXXXXXXXXXXNR 497
FVDF E NR
Sbjct: 84 FVDFRDEAAANHAHSLLNR 102
>ref|XP_004984515.1| PREDICTED: RNA-binding protein 40-like [Setaria italica]
Length = 459
Score = 86.3 bits (212), Expect = 4e-15
Identities = 42/60 (70%), Positives = 44/60 (73%)
Frame = +3
Query: 318 ATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLRNCAFVDFNSEXXXXXXXXXXNR 497
ATLLVRHLPEAI E LS LFSHYGA+SVRPCAGG+LRNCAFVDF E NR
Sbjct: 35 ATLLVRHLPEAITQEMLSRLFSHYGATSVRPCAGGKLRNCAFVDFRDEAAANHAHSLLNR 94
>ref|XP_006479054.1| PREDICTED: RNA-binding protein 40-like isoform X2 [Citrus sinensis]
Length = 389
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/53 (67%), Positives = 46/53 (86%)
Frame = +3
Query: 303 ESQSQATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLRNCAFVDFNSE 461
E+++ TLL++HLP+AIP +TLS +FSHYGASSVRPC+ GRLRNC FVDF +E
Sbjct: 15 EAENLVTLLIKHLPDAIPQDTLSRIFSHYGASSVRPCSAGRLRNCVFVDFGNE 67
>ref|XP_006443354.1| hypothetical protein CICLE_v10020067mg [Citrus clementina]
gi|567901734|ref|XP_006443355.1| hypothetical protein
CICLE_v10020067mg [Citrus clementina]
gi|568850729|ref|XP_006479053.1| PREDICTED: RNA-binding
protein 40-like isoform X1 [Citrus sinensis]
gi|557545616|gb|ESR56594.1| hypothetical protein
CICLE_v10020067mg [Citrus clementina]
gi|557545617|gb|ESR56595.1| hypothetical protein
CICLE_v10020067mg [Citrus clementina]
Length = 461
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/53 (67%), Positives = 46/53 (86%)
Frame = +3
Query: 303 ESQSQATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLRNCAFVDFNSE 461
E+++ TLL++HLP+AIP +TLS +FSHYGASSVRPC+ GRLRNC FVDF +E
Sbjct: 15 EAENLVTLLIKHLPDAIPQDTLSRIFSHYGASSVRPCSAGRLRNCVFVDFGNE 67
>tpg|DAA45145.1| TPA: hypothetical protein ZEAMMB73_529929 [Zea mays]
Length = 396
Score = 85.1 bits (209), Expect = 9e-15
Identities = 41/60 (68%), Positives = 44/60 (73%)
Frame = +3
Query: 318 ATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLRNCAFVDFNSEXXXXXXXXXXNR 497
ATLLVRHLPEAI E LS LFSHYGA+SVRPC+GG+LRNCAFVDF E NR
Sbjct: 26 ATLLVRHLPEAITQEMLSRLFSHYGATSVRPCSGGKLRNCAFVDFRDEAAANHAHSLLNR 85
>ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 40-like [Vitis
vinifera]
Length = 463
Score = 85.1 bits (209), Expect = 9e-15
Identities = 41/60 (68%), Positives = 45/60 (75%)
Frame = +3
Query: 282 PSKPFLDESQSQATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLRNCAFVDFNSE 461
P + +S ATLL+RHLPEAIP +TLS LFS YGASSVRP GRLRNCAFVDF SE
Sbjct: 9 PRTQSFEAEKSAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPSTSGRLRNCAFVDFKSE 68
>emb|CBI36673.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 85.1 bits (209), Expect = 9e-15
Identities = 41/60 (68%), Positives = 45/60 (75%)
Frame = +3
Query: 282 PSKPFLDESQSQATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLRNCAFVDFNSE 461
P + +S ATLL+RHLPEAIP +TLS LFS YGASSVRP GRLRNCAFVDF SE
Sbjct: 9 PRTQSFEAEKSAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPSTSGRLRNCAFVDFKSE 68
>ref|NP_001132325.1| hypothetical protein [Zea mays] gi|194694084|gb|ACF81126.1| unknown
[Zea mays] gi|414866589|tpg|DAA45146.1| TPA:
hypothetical protein ZEAMMB73_529929 [Zea mays]
gi|414866590|tpg|DAA45147.1| TPA: hypothetical protein
ZEAMMB73_529929 [Zea mays]
Length = 450
Score = 85.1 bits (209), Expect = 9e-15
Identities = 41/60 (68%), Positives = 44/60 (73%)
Frame = +3
Query: 318 ATLLVRHLPEAIPHETLSHLFSHYGASSVRPCAGGRLRNCAFVDFNSEXXXXXXXXXXNR 497
ATLLVRHLPEAI E LS LFSHYGA+SVRPC+GG+LRNCAFVDF E NR
Sbjct: 26 ATLLVRHLPEAITQEMLSRLFSHYGATSVRPCSGGKLRNCAFVDFRDEAAANHAHSLLNR 85