BLASTX nr result
ID: Sinomenium21_contig00028864
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00028864
(433 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 178 6e-43
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana] 177 2e-42
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 177 2e-42
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 176 4e-42
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 175 5e-42
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 175 5e-42
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 175 7e-42
gb|AGW47867.1| polyprotein [Phaseolus vulgaris] 171 7e-41
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 163 2e-38
gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle... 159 3e-37
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle... 159 3e-37
gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halle... 159 4e-37
gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halle... 158 9e-37
gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halle... 157 1e-36
gb|AGH20669.1| reverse transcriptase, partial [Lepidium sativum] 157 1e-36
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle... 157 1e-36
gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halle... 157 1e-36
gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halle... 157 1e-36
gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halle... 156 3e-36
gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wal... 155 4e-36
>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
copia-type polyprotein [Glycine max]
Length = 1042
Score = 178 bits (452), Expect = 6e-43
Identities = 81/145 (55%), Positives = 118/145 (81%), Gaps = 1/145 (0%)
Frame = -2
Query: 432 PRHMRSLQDIYEEIGEVS-LCCLLADCEPIGFEEAVQNQKWVHEMKEEFQASKKNDSREL 256
PR MR++Q++Y+E ++ L CL D +P+ F+EA+++++W M+EE +A +KN++ EL
Sbjct: 500 PRRMRNIQELYDETEVINDLFCLFVDSKPLNFDEAMKDKRWRQAMEEEIKAIEKNNTWEL 559
Query: 255 ANLPTSHKAIGVKWIYKVKKNANGQFERYKAILLAKGYTQRHDMDYNEVFSPIVRMETIR 76
++LP H+AIGVKW++K+KKNA G+ ER+KA L+AKGY Q++++DY+EVF+P+ RMETIR
Sbjct: 560 SSLPKGHEAIGVKWVFKIKKNAKGEVERHKARLVAKGYKQQYEVDYDEVFAPVARMETIR 619
Query: 75 LLISLAAHNKWKIFQIDVKYAFLNG 1
LLISLAA KW+IFQ DVK AFLNG
Sbjct: 620 LLISLAAQMKWRIFQFDVKSAFLNG 644
>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
Length = 623
Score = 177 bits (448), Expect = 2e-42
Identities = 81/143 (56%), Positives = 112/143 (78%), Gaps = 3/143 (2%)
Frame = -2
Query: 420 RSLQDIYEEIGE---VSLCCLLADCEPIGFEEAVQNQKWVHEMKEEFQASKKNDSRELAN 250
RS+Q++YE ++L CL A+CEP+ F+EA++ + W + M EE ++ +KND+ EL +
Sbjct: 309 RSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTS 368
Query: 249 LPTSHKAIGVKWIYKVKKNANGQFERYKAILLAKGYTQRHDMDYNEVFSPIVRMETIRLL 70
LP HKAIGVKW+YK KKN+ G+ ERYKA L+AKGY+QR +DY+E+F+P+ R+ET+RL+
Sbjct: 369 LPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLI 428
Query: 69 ISLAAHNKWKIFQIDVKYAFLNG 1
ISLAA NKWKI Q+DVK AFLNG
Sbjct: 429 ISLAAQNKWKIHQMDVKSAFLNG 451
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1272
Score = 177 bits (448), Expect = 2e-42
Identities = 81/143 (56%), Positives = 112/143 (78%), Gaps = 3/143 (2%)
Frame = -2
Query: 420 RSLQDIYEEIGE---VSLCCLLADCEPIGFEEAVQNQKWVHEMKEEFQASKKNDSRELAN 250
RS+Q++YE ++L CL A+CEP+ F+EA++ + W + M EE ++ +KND+ EL +
Sbjct: 812 RSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTS 871
Query: 249 LPTSHKAIGVKWIYKVKKNANGQFERYKAILLAKGYTQRHDMDYNEVFSPIVRMETIRLL 70
LP HKAIGVKW+YK KKN+ G+ ERYKA L+AKGY+QR +DY+E+F+P+ R+ET+RL+
Sbjct: 872 LPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLI 931
Query: 69 ISLAAHNKWKIFQIDVKYAFLNG 1
ISLAA NKWKI Q+DVK AFLNG
Sbjct: 932 ISLAAQNKWKIHQMDVKSAFLNG 954
>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 176 bits (445), Expect = 4e-42
Identities = 81/143 (56%), Positives = 111/143 (77%), Gaps = 3/143 (2%)
Frame = -2
Query: 420 RSLQDIYEEIGE---VSLCCLLADCEPIGFEEAVQNQKWVHEMKEEFQASKKNDSRELAN 250
RS+Q++YE ++L CL A+CEP+ F+EA++ + W + M EE ++ +KND+ EL +
Sbjct: 751 RSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTS 810
Query: 249 LPTSHKAIGVKWIYKVKKNANGQFERYKAILLAKGYTQRHDMDYNEVFSPIVRMETIRLL 70
LP HKAIGVKW+YK KKN+ G+ ERYKA L+AKGY+QR +DY+EVF+P+ R+ET+RL+
Sbjct: 811 LPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLI 870
Query: 69 ISLAAHNKWKIFQIDVKYAFLNG 1
ISLAA NKWKI Q+D K AFLNG
Sbjct: 871 ISLAAQNKWKIHQMDFKLAFLNG 893
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 175 bits (444), Expect = 5e-42
Identities = 81/143 (56%), Positives = 112/143 (78%), Gaps = 3/143 (2%)
Frame = -2
Query: 420 RSLQDIYEEIGE---VSLCCLLADCEPIGFEEAVQNQKWVHEMKEEFQASKKNDSRELAN 250
RS+Q++YE ++L CL A+CEP+ F++A++ + W + M EE ++ +KND+ EL +
Sbjct: 812 RSIQELYEVTENQENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTS 871
Query: 249 LPTSHKAIGVKWIYKVKKNANGQFERYKAILLAKGYTQRHDMDYNEVFSPIVRMETIRLL 70
LP HKAIGVKW+YK KKN+ G+ ERYKA L+AKGY+QR +DY+EVF+P+ R+ET+RL+
Sbjct: 872 LPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLI 931
Query: 69 ISLAAHNKWKIFQIDVKYAFLNG 1
ISLAA NKWKI Q+DVK AFLNG
Sbjct: 932 ISLAAQNKWKIHQMDVKSAFLNG 954
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 175 bits (444), Expect = 5e-42
Identities = 81/143 (56%), Positives = 112/143 (78%), Gaps = 3/143 (2%)
Frame = -2
Query: 420 RSLQDIYEEIGE---VSLCCLLADCEPIGFEEAVQNQKWVHEMKEEFQASKKNDSRELAN 250
RS+Q++YE ++L CL A+CEP+ F++A++ + W + M EE ++ +KND+ EL +
Sbjct: 812 RSIQELYEVTENQENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTS 871
Query: 249 LPTSHKAIGVKWIYKVKKNANGQFERYKAILLAKGYTQRHDMDYNEVFSPIVRMETIRLL 70
LP HKAIGVKW+YK KKN+ G+ ERYKA L+AKGY+QR +DY+EVF+P+ R+ET+RL+
Sbjct: 872 LPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLI 931
Query: 69 ISLAAHNKWKIFQIDVKYAFLNG 1
ISLAA NKWKI Q+DVK AFLNG
Sbjct: 932 ISLAAQNKWKIHQMDVKSAFLNG 954
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 175 bits (443), Expect = 7e-42
Identities = 81/143 (56%), Positives = 110/143 (76%), Gaps = 3/143 (2%)
Frame = -2
Query: 420 RSLQDIYEEIGE---VSLCCLLADCEPIGFEEAVQNQKWVHEMKEEFQASKKNDSRELAN 250
RS+Q++YE ++L CL A+CEP+ F+EA++ + W + M EE ++ +KND+ EL +
Sbjct: 812 RSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTS 871
Query: 249 LPTSHKAIGVKWIYKVKKNANGQFERYKAILLAKGYTQRHDMDYNEVFSPIVRMETIRLL 70
LP HK IGVKW+YK KKN+ G+ ERYKA L+AKGY QR +DY+EVF+P+ R+ET+RL+
Sbjct: 872 LPNGHKTIGVKWVYKAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLI 931
Query: 69 ISLAAHNKWKIFQIDVKYAFLNG 1
ISLAA NKWKI Q+DVK AFLNG
Sbjct: 932 ISLAAQNKWKIHQMDVKSAFLNG 954
>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
Length = 1471
Score = 171 bits (434), Expect = 7e-41
Identities = 85/141 (60%), Positives = 105/141 (74%)
Frame = -2
Query: 423 MRSLQDIYEEIGEVSLCCLLADCEPIGFEEAVQNQKWVHEMKEEFQASKKNDSRELANLP 244
+RSL D+Y+ EV L CLLAD E I FEEAV+++KW M EE +A +N++ EL LP
Sbjct: 813 IRSLHDLYDSTNEVHLVCLLADAENISFEEAVRDKKWQTAMDEEIKAIDRNNTWELTELP 872
Query: 243 TSHKAIGVKWIYKVKKNANGQFERYKAILLAKGYTQRHDMDYNEVFSPIVRMETIRLLIS 64
+ IGVKWI+K K NA G+ ERYKA L+AKGY Q+ +DY+EVF+P+VRMETIRLLIS
Sbjct: 873 EGSQPIGVKWIFKKKMNAQGEIERYKARLVAKGYKQKEGIDYDEVFAPVVRMETIRLLIS 932
Query: 63 LAAHNKWKIFQIDVKYAFLNG 1
AA KW IFQ+DVK AFLNG
Sbjct: 933 QAAQFKWPIFQMDVKSAFLNG 953
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 163 bits (413), Expect = 2e-38
Identities = 73/119 (61%), Positives = 97/119 (81%)
Frame = -2
Query: 357 CEPIGFEEAVQNQKWVHEMKEEFQASKKNDSRELANLPTSHKAIGVKWIYKVKKNANGQF 178
CEP+ F+EA++ + W + M EE ++ +KND+ EL +LP HKAIGVKW+YK KKN+ G+
Sbjct: 804 CEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEV 863
Query: 177 ERYKAILLAKGYTQRHDMDYNEVFSPIVRMETIRLLISLAAHNKWKIFQIDVKYAFLNG 1
ERYKA L+AKGY+QR +DY+EVF+P+ R+ET+RL+ISLAA NKWKI Q+DVK AFLNG
Sbjct: 864 ERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNG 922
>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 159 bits (403), Expect = 3e-37
Identities = 73/114 (64%), Positives = 94/114 (82%)
Frame = -2
Query: 342 FEEAVQNQKWVHEMKEEFQASKKNDSRELANLPTSHKAIGVKWIYKVKKNANGQFERYKA 163
F+EA++ + W + M EE +A KKND+ ELA+LP HKAIGVKW+YK KKN+ G+ ERYKA
Sbjct: 2 FQEAIEKKTWRNAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61
Query: 162 ILLAKGYTQRHDMDYNEVFSPIVRMETIRLLISLAAHNKWKIFQIDVKYAFLNG 1
L+AKGY+QR +DY+EVF+P+ R+ET+RL+ISLAA NKWKI Q+DVK AFLNG
Sbjct: 62 RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNG 115
>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera] gi|389595484|gb|AFK88545.1| reverse
transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 159 bits (403), Expect = 3e-37
Identities = 73/114 (64%), Positives = 94/114 (82%)
Frame = -2
Query: 342 FEEAVQNQKWVHEMKEEFQASKKNDSRELANLPTSHKAIGVKWIYKVKKNANGQFERYKA 163
F+EA++ + W + M EE +A KKND+ ELA+LP HKAIGVKW+YK KKN+ G+ ERYKA
Sbjct: 2 FQEAIEKKTWRNAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61
Query: 162 ILLAKGYTQRHDMDYNEVFSPIVRMETIRLLISLAAHNKWKIFQIDVKYAFLNG 1
L+AKGY+QR +DY+EVF+P+ R+ET+RL+ISLAA NKWKI Q+DVK AFLNG
Sbjct: 62 RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNG 115
>gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 159 bits (402), Expect = 4e-37
Identities = 73/114 (64%), Positives = 93/114 (81%)
Frame = -2
Query: 342 FEEAVQNQKWVHEMKEEFQASKKNDSRELANLPTSHKAIGVKWIYKVKKNANGQFERYKA 163
F+EA++ W + M EE +A KKND+ ELA+LP HKAIGVKW+YK KKN+ G+ ERYKA
Sbjct: 2 FQEAIEKNTWRNAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61
Query: 162 ILLAKGYTQRHDMDYNEVFSPIVRMETIRLLISLAAHNKWKIFQIDVKYAFLNG 1
L+AKGY+QR +DY+EVF+P+ R+ET+RL+ISLAA NKWKI Q+DVK AFLNG
Sbjct: 62 RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNG 115
>gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 158 bits (399), Expect = 9e-37
Identities = 73/114 (64%), Positives = 92/114 (80%)
Frame = -2
Query: 342 FEEAVQNQKWVHEMKEEFQASKKNDSRELANLPTSHKAIGVKWIYKVKKNANGQFERYKA 163
F+EA++ + W + M EE +A KKND+ ELA+LP HKAIGVKW+YK KKN+ G+ ERYK
Sbjct: 2 FQEAIEKKTWKNAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKG 61
Query: 162 ILLAKGYTQRHDMDYNEVFSPIVRMETIRLLISLAAHNKWKIFQIDVKYAFLNG 1
L+AKGY QR +DY+EVF+PI R+ET+RL+ISLAA NKWKI Q+DVK AFLNG
Sbjct: 62 RLVAKGYCQRAGIDYDEVFAPIARLETVRLIISLAAQNKWKIHQMDVKSAFLNG 115
>gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 157 bits (398), Expect = 1e-36
Identities = 72/114 (63%), Positives = 92/114 (80%)
Frame = -2
Query: 342 FEEAVQNQKWVHEMKEEFQASKKNDSRELANLPTSHKAIGVKWIYKVKKNANGQFERYKA 163
F+EA++ + W + M EE +A KKND+ ELA+LP HKAIGVKW+YK KKN+ G+ ERYK
Sbjct: 2 FQEAIEKKTWKNAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKG 61
Query: 162 ILLAKGYTQRHDMDYNEVFSPIVRMETIRLLISLAAHNKWKIFQIDVKYAFLNG 1
L+AKGY QR +DY+EVF+P+ R+ET+RL+ISLAA NKWKI Q+DVK AFLNG
Sbjct: 62 RLVAKGYCQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNG 115
>gb|AGH20669.1| reverse transcriptase, partial [Lepidium sativum]
Length = 315
Score = 157 bits (397), Expect = 1e-36
Identities = 72/114 (63%), Positives = 95/114 (83%)
Frame = -2
Query: 342 FEEAVQNQKWVHEMKEEFQASKKNDSRELANLPTSHKAIGVKWIYKVKKNANGQFERYKA 163
F+EA + + W + M+EE ++ +KND+ ELA+LP HKAIGVKW+YK KKNANG+ ERYKA
Sbjct: 2 FKEAQEKKTWGNAMEEEIKSIQKNDTWELASLPNGHKAIGVKWMYKAKKNANGEIERYKA 61
Query: 162 ILLAKGYTQRHDMDYNEVFSPIVRMETIRLLISLAAHNKWKIFQIDVKYAFLNG 1
L+AKGY+QR +DY+EVF+P+ R+ET+RL+ISLAA NKW+I Q+DVK AFLNG
Sbjct: 62 RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWRIHQMDVKSAFLNG 115
>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 157 bits (397), Expect = 1e-36
Identities = 72/114 (63%), Positives = 93/114 (81%)
Frame = -2
Query: 342 FEEAVQNQKWVHEMKEEFQASKKNDSRELANLPTSHKAIGVKWIYKVKKNANGQFERYKA 163
F+EA++ + W + EE +A KKND+ ELA+LP HKAIGVKW+YK KKN+ G+ ERYKA
Sbjct: 2 FQEAIEKKTWRNATDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61
Query: 162 ILLAKGYTQRHDMDYNEVFSPIVRMETIRLLISLAAHNKWKIFQIDVKYAFLNG 1
L+AKGY+QR +DY+EVF+P+ R+ET+RL+ISLAA NKWKI Q+DVK AFLNG
Sbjct: 62 RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNG 115
>gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 157 bits (397), Expect = 1e-36
Identities = 71/114 (62%), Positives = 93/114 (81%)
Frame = -2
Query: 342 FEEAVQNQKWVHEMKEEFQASKKNDSRELANLPTSHKAIGVKWIYKVKKNANGQFERYKA 163
F+EA++ + W + M E+ +A KKND+ ELA+LP HKAIGVKW+YK KKN+ G+ ERYKA
Sbjct: 2 FQEAIEKKTWRNSMDEDIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61
Query: 162 ILLAKGYTQRHDMDYNEVFSPIVRMETIRLLISLAAHNKWKIFQIDVKYAFLNG 1
L+AKGY+QR +DY+EVF+P+ R+ET+RL+ISLAA NKWKI Q+DVK FLNG
Sbjct: 62 RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSTFLNG 115
>gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 157 bits (397), Expect = 1e-36
Identities = 72/114 (63%), Positives = 93/114 (81%)
Frame = -2
Query: 342 FEEAVQNQKWVHEMKEEFQASKKNDSRELANLPTSHKAIGVKWIYKVKKNANGQFERYKA 163
F+EA++ + W + M EE +A KKND+ ELA+LP HKAIGVKW+YK KKN+ G+ ERYKA
Sbjct: 2 FQEAIEKKTWRNAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61
Query: 162 ILLAKGYTQRHDMDYNEVFSPIVRMETIRLLISLAAHNKWKIFQIDVKYAFLNG 1
L+AKGY+QR +DY+EVF+P+ R+ET+RL+I LAA NKWKI Q+DVK AFLNG
Sbjct: 62 RLVAKGYSQRAGIDYDEVFAPVARLETVRLIILLAAQNKWKIHQMDVKSAFLNG 115
>gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 156 bits (394), Expect = 3e-36
Identities = 72/114 (63%), Positives = 93/114 (81%)
Frame = -2
Query: 342 FEEAVQNQKWVHEMKEEFQASKKNDSRELANLPTSHKAIGVKWIYKVKKNANGQFERYKA 163
F+EA++ + W + M EE +A KKND+ ELA+LP HKAI VKW+YK KKN+ G+ ERYKA
Sbjct: 2 FQEAIEKKTWRNAMDEEIKAIKKNDTWELASLPNGHKAICVKWVYKAKKNSKGEVERYKA 61
Query: 162 ILLAKGYTQRHDMDYNEVFSPIVRMETIRLLISLAAHNKWKIFQIDVKYAFLNG 1
L+AKGY+QR +DY+EVF+P+ R+ET+RL+ISLAA NKWKI Q+DVK AFLNG
Sbjct: 62 RLVAKGYSQRTGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNG 115
>gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wallichii]
Length = 315
Score = 155 bits (393), Expect = 4e-36
Identities = 71/114 (62%), Positives = 92/114 (80%)
Frame = -2
Query: 342 FEEAVQNQKWVHEMKEEFQASKKNDSRELANLPTSHKAIGVKWIYKVKKNANGQFERYKA 163
F+EA++ + W M EE +A +KND+ ELA LP HKAIGVKW+YK KKN+ G+ ERYKA
Sbjct: 2 FQEAIEKKTWRKAMDEEIKAIQKNDTWELATLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61
Query: 162 ILLAKGYTQRHDMDYNEVFSPIVRMETIRLLISLAAHNKWKIFQIDVKYAFLNG 1
L+AKGY+Q+ +DY+EVF+P+ R+ET+RL+ISLAA NKWKI Q+DVK AFLNG
Sbjct: 62 RLVAKGYSQKAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNG 115