BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00028374
         (1398 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    62   5e-07
ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [S...    61   1e-06
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   2e-06
emb|CAB72467.1| putative protein [Arabidopsis thaliana]                59   5e-06
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    59   5e-06

>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
 Frame = -3

Query: 874 PVKYLGFPFIPGKFSTQDHDQLIDYIRKEVKVWKEKLFSYVGRQEQIKK-SFKAHVYSKG 698
           PV+YLG P +  + +T D+  LID IR+ + +W  +  S+ GR   I    +    +   
Sbjct: 489 PVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSRYLSFAGRLSLINSVLWSITNFWMN 548

Query: 697 LYGFPSKM---CDRIESIMFLKGINAGKKLSHISWHEIYKHKRKEA*ALKT-KELNKAGI 530
            +  P +     +RI S +   G     K + +SW EI K K++    L++ +E NK   
Sbjct: 549 AFRLPRECINEINRISSALLWSGPELNPKKAKVSWDEICKPKKEGGLGLQSLREANKVSS 608

Query: 529 VGLVW 515
           + L+W
Sbjct: 609 LKLIW 613


>ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [Sorghum bicolor]
           gi|241946107|gb|EES19252.1| hypothetical protein
           SORBIDRAFT_09g007400 [Sorghum bicolor]
          Length = 835

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
 Frame = -3

Query: 874 PVKYLGFPFIPGKFSTQDHDQLIDYIRKEVKVWKEKLFSYVGRQEQIKKSF-KAHVYSKG 698
           P+KYLG P  P +    D   LID   K++ +WK    S  GR   I  S   A +Y   
Sbjct: 368 PIKYLGVPVSPSRLHVSDWSPLIDKSMKKLDIWKGGNMSIAGRSTLISSSLNNAPIYHMS 427

Query: 697 LYGFPSKMCDRIESI---MFLKGINAGKKLSHISWHEIYKHKRKEA*ALKTKELNKAGIV 527
           +Y  P  +  R++ I    F +G +  +K   I W +I + K+K    +  K++ K  + 
Sbjct: 428 IYLLPKSVIGRLDKIRRNFFWQGGSTKQKYHLIKWTKICRSKKKG--GIGIKDIRKMNVS 485

Query: 526 GLV-WW 512
            L+ WW
Sbjct: 486 LLIKWW 491


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
 Frame = -3

Query: 868  KYLGFPFIPGKFSTQDHDQLIDYIRKEVKVWKEKLFSYVGRQEQIKKSFKA-HVYSKGLY 692
            KYLG P I G+ S +++  L+D I  ++  WK K  S  GR   I+ +F +   Y+    
Sbjct: 755  KYLGVPTINGRSSKREYQYLVDRINGKLAGWKTKTLSIAGRATLIQSAFSSIPYYTMQST 814

Query: 691  GFPSKMCDRIE--SIMFLKGINAGKKLSH-ISWHEIYKHKRKEA*ALKT-KELNKAGIVG 524
              P   CD I+  S  FL G   GK+  H ++W  I K K++    +++ ++ N A +V 
Sbjct: 815  KLPRSTCDDIDRKSRSFLWGEQEGKRRVHLVAWENISKSKKEGGLGIRSMRQANSAFLVK 874

Query: 523  LVW 515
            L W
Sbjct: 875  LGW 877


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 5/128 (3%)
 Frame = -3

Query: 874 PVKYLGFPFIPGKFSTQDHDQLIDYIRKEVKVWKEKLFSYVGRQEQIKK-SFKAHVYSKG 698
           P++YLG P +  + S+ D+  LI+ IRK +  W  +  S+ GR   I    + +  +   
Sbjct: 321 PIRYLGLPLVTKRLSSVDYAPLIEQIRKRIGSWSSRFLSFAGRFNLISSIIWSSCNFWLS 380

Query: 697 LYGFPSKMCDRIE---SIMFLKGINAGKKLSHISWHEIYKHKRKEA*ALKT-KELNKAGI 530
            +  P      IE   S     G N   K + ISW+++ K K +    L++ KE N    
Sbjct: 381 AFQLPRACIQEIEKLCSSFLWSGTNLNSKKAKISWNQVCKPKSEGGLGLRSLKEANDVCC 440

Query: 529 VGLVWWVI 506
           + LVW +I
Sbjct: 441 LKLVWRII 448


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 5/128 (3%)
 Frame = -3

Query: 874  PVKYLGFPFIPGKFSTQDHDQLIDYIRKEVKVWKEKLFSYVGRQEQIKKSFKAHV-YSKG 698
            PVKYLG P +  + +  D+  L++ IR  +  W  +  S+ GR + IK    +   +   
Sbjct: 915  PVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFWLS 974

Query: 697  LYGFPSKMCDRIE---SIMFLKGINAGKKLSHISWHEIYKHKRKEA*ALK-TKELNKAGI 530
            ++  P      IE   S     G +   K + I+W E+ K K +    LK  KE N+  +
Sbjct: 975  VFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEGGLGLKPLKEANEVSL 1034

Query: 529  VGLVWWVI 506
            + L+W ++
Sbjct: 1035 LKLIWRIL 1042