BLASTX nr result
ID: Sinomenium21_contig00028153
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00028153
(262 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
emb|CBI32698.3| unnamed protein product [Vitis vinifera] 87 2e-15
ref|XP_006840276.1| hypothetical protein AMTR_s00045p00048330 [A... 83 5e-14
ref|XP_006604564.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
gb|ADE76509.1| unknown [Picea sitchensis] 76 4e-12
ref|XP_006577708.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
gb|ACE80808.1| pentatricopeptide repeat protein [Pinus nigra] 75 1e-11
ref|XP_004306236.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
ref|XP_007162705.1| hypothetical protein PHAVU_001G173400g [Phas... 74 3e-11
gb|AFG65230.1| hypothetical protein 0_10195_01, partial [Pinus t... 74 3e-11
gb|AFG65224.1| hypothetical protein 0_10195_01, partial [Pinus t... 73 4e-11
gb|AFG65219.1| hypothetical protein 0_10195_01, partial [Pinus t... 73 4e-11
gb|AEW07735.1| hypothetical protein 0_10195_01, partial [Pinus r... 73 4e-11
ref|XP_007051907.1| Tetratricopeptide repeat-like superfamily pr... 73 5e-11
gb|AEW07736.1| hypothetical protein 0_10195_01, partial [Pinus l... 73 5e-11
ref|XP_002320672.2| pentatricopeptide repeat-containing family p... 72 6e-11
gb|AFG65217.1| hypothetical protein 0_10195_01, partial [Pinus t... 72 8e-11
gb|ACE80717.1| pentatricopeptide repeat protein [Haplomitrium mn... 72 8e-11
ref|XP_004494006.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_007034693.1| Pentatricopeptide repeat (PPR) superfamily p... 71 1e-10
>ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = -1
Query: 262 LMKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVP 95
LMK RGVRKVPGQSWI VKDR+HVF VED LHP+ +IY +L +L L+M++AGYVP
Sbjct: 697 LMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIYTMLEELLLQMLDAGYVP 752
>emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = -1
Query: 262 LMKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVP 95
LMK RGVRKVPGQSWI VKDR+HVF VED LHP+ +IY +L +L L+M++AGYVP
Sbjct: 435 LMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIYTMLEELLLQMLDAGYVP 490
>ref|XP_006840276.1| hypothetical protein AMTR_s00045p00048330 [Amborella trichopoda]
gi|548841994|gb|ERN01951.1| hypothetical protein
AMTR_s00045p00048330 [Amborella trichopoda]
Length = 605
Score = 82.8 bits (203), Expect = 5e-14
Identities = 39/62 (62%), Positives = 47/62 (75%)
Frame = -1
Query: 262 LMKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVPDRGF 83
LMK+RGVRK PG SWI+VKD+VHVF ED HPQM ++Y+V +L L M EAGY PD GF
Sbjct: 541 LMKSRGVRKDPGLSWIKVKDKVHVFVSEDGNHPQMEDVYVVSLELSLHMREAGYAPDLGF 600
Query: 82 EI 77
+
Sbjct: 601 AL 602
>ref|XP_006604564.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 762
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = -1
Query: 262 LMKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVPDRGF 83
LMK GV+KVPGQSWI VKD++HVF ED HPQ G IY +L DL L+M++ GY P +
Sbjct: 698 LMKQMGVQKVPGQSWIEVKDQIHVFFSEDSSHPQRGNIYTMLEDLWLQMLDDGYDPCQRL 757
Query: 82 EI 77
+I
Sbjct: 758 DI 759
>gb|ADE76509.1| unknown [Picea sitchensis]
Length = 246
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = -1
Query: 262 LMKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVPDRGF 83
+MK+RGV+K PG SWI VK++VH F VED+ HPQ EIY L +L +M AGYVPD F
Sbjct: 102 IMKDRGVQKQPGCSWIEVKNKVHTFMVEDKSHPQTEEIYSTLEELARQMEAAGYVPDTNF 161
>ref|XP_006577708.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like, partial [Glycine max]
Length = 799
Score = 75.1 bits (183), Expect = 1e-11
Identities = 35/62 (56%), Positives = 45/62 (72%)
Frame = -1
Query: 262 LMKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVPDRGF 83
LMK GV+KVPGQSWI VKD++HVF ED H Q G+IY +L DL L+M++ GY P +
Sbjct: 735 LMKQMGVQKVPGQSWIAVKDQIHVFFSEDNSHQQRGDIYTMLEDLWLQMLDDGYDPCQRL 794
Query: 82 EI 77
+I
Sbjct: 795 DI 796
>gb|ACE80808.1| pentatricopeptide repeat protein [Pinus nigra]
Length = 153
Score = 75.1 bits (183), Expect = 1e-11
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -1
Query: 262 LMKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVPDRGF 83
LMK+RGV+K PG SWI+V ++H F V DR HPQM EIYM L L LEM AGYV + GF
Sbjct: 15 LMKDRGVKKTPGYSWIKVNKQLHAFLVGDRSHPQMEEIYMELERLPLEMEMAGYVANTGF 74
>ref|XP_004306236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 757
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/56 (57%), Positives = 43/56 (76%)
Frame = -1
Query: 262 LMKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVP 95
LM+ GV+KVPGQSWI +KDR+HVF VED HP+ G+IY +L +L L+M++ G P
Sbjct: 699 LMRESGVKKVPGQSWIEIKDRIHVFLVEDSSHPERGQIYAMLEELWLQMLDDGCDP 754
>ref|XP_007162705.1| hypothetical protein PHAVU_001G173400g [Phaseolus vulgaris]
gi|561036169|gb|ESW34699.1| hypothetical protein
PHAVU_001G173400g [Phaseolus vulgaris]
Length = 763
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = -1
Query: 262 LMKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVPDRGF 83
LMK GV+KVPGQSWI KD++HVF ED HPQ +IY +L DL L+M++ GY P +
Sbjct: 699 LMKEMGVQKVPGQSWIEFKDQIHVFFSEDSSHPQSAKIYTMLEDLWLQMLDQGYDPCQRL 758
Query: 82 EI 77
++
Sbjct: 759 DV 760
>gb|AFG65230.1| hypothetical protein 0_10195_01, partial [Pinus taeda]
Length = 136
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = -1
Query: 262 LMKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVPDRGF 83
+MK+RG++K PG SWI VK+RVH F V DR HPQ EIY L L ++ E GY+PD F
Sbjct: 5 MMKSRGIQKKPGYSWIEVKNRVHSFMVNDRSHPQTEEIYTTLESLAEQIKEVGYMPDTNF 64
>gb|AFG65224.1| hypothetical protein 0_10195_01, partial [Pinus taeda]
Length = 136
Score = 73.2 bits (178), Expect = 4e-11
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = -1
Query: 262 LMKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVPDRGF 83
+MK+RG++K PG SWI VK+RVH F V DR HPQ EIY L L ++ E GY+PD F
Sbjct: 5 MMKSRGIQKKPGYSWIEVKNRVHSFMVNDRSHPQTEEIYKTLESLTEQIKEVGYMPDTNF 64
>gb|AFG65219.1| hypothetical protein 0_10195_01, partial [Pinus taeda]
gi|383164871|gb|AFG65231.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164873|gb|AFG65232.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164875|gb|AFG65233.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
Length = 136
Score = 73.2 bits (178), Expect = 4e-11
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = -1
Query: 262 LMKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVPDRGF 83
+MK+RG++K PG SWI VK+RVH F V DR HPQ EIY L L ++ E GY+PD F
Sbjct: 5 MMKSRGIQKKPGYSWIEVKNRVHSFMVNDRSHPQTQEIYTTLESLTEQIKEVGYMPDTNF 64
>gb|AEW07735.1| hypothetical protein 0_10195_01, partial [Pinus radiata]
gi|383164845|gb|AFG65218.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164849|gb|AFG65220.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164851|gb|AFG65221.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164853|gb|AFG65222.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164855|gb|AFG65223.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164859|gb|AFG65225.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164861|gb|AFG65226.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164863|gb|AFG65227.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164865|gb|AFG65228.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164867|gb|AFG65229.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
Length = 136
Score = 73.2 bits (178), Expect = 4e-11
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = -1
Query: 262 LMKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVPDRGF 83
+MK+RG++K PG SWI VK+RVH F V DR HPQ EIY L L ++ E GY+PD F
Sbjct: 5 MMKSRGIQKKPGYSWIEVKNRVHSFMVNDRSHPQTEEIYTTLESLTEQIKEVGYMPDTNF 64
>ref|XP_007051907.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508704168|gb|EOX96064.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 809
Score = 72.8 bits (177), Expect = 5e-11
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = -1
Query: 259 MKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVPDRGFE 80
MK+RG+ K PG SWI V RVH F EDR HP+ GEIY + ++ L++ EAGYVPD F
Sbjct: 666 MKSRGINKEPGCSWIEVNSRVHRFMSEDRGHPRTGEIYSKIDEMMLQIKEAGYVPDISFA 725
Query: 79 I 77
+
Sbjct: 726 L 726
>gb|AEW07736.1| hypothetical protein 0_10195_01, partial [Pinus lambertiana]
Length = 136
Score = 72.8 bits (177), Expect = 5e-11
Identities = 33/60 (55%), Positives = 40/60 (66%)
Frame = -1
Query: 262 LMKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVPDRGF 83
+MK+RG++K PG SWI VK+RVH F V DR HPQ EIY L L ++ E GY PD F
Sbjct: 5 MMKSRGIQKKPGYSWIEVKNRVHSFMVNDRSHPQTQEIYTTLESLTEQIKEVGYTPDTNF 64
>ref|XP_002320672.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550323097|gb|EEE98987.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 720
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/65 (50%), Positives = 45/65 (69%)
Frame = -1
Query: 262 LMKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVPDRGF 83
LM++RG+RK PG SWI + RVHVF ED HP++ EI+M L ++ ++M AGYVPD +
Sbjct: 573 LMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYLDEMFVKMKRAGYVPDVRW 632
Query: 82 EIVPD 68
V D
Sbjct: 633 AFVKD 637
>gb|AFG65217.1| hypothetical protein 0_10195_01, partial [Pinus taeda]
Length = 136
Score = 72.0 bits (175), Expect = 8e-11
Identities = 32/60 (53%), Positives = 41/60 (68%)
Frame = -1
Query: 262 LMKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVPDRGF 83
+MK+RG++K PG SWI VK++VH F V DR HPQ EIY L L ++ E GY+PD F
Sbjct: 5 MMKSRGIQKKPGYSWIEVKNKVHSFMVNDRSHPQTEEIYTTLESLTEQIKEVGYMPDTNF 64
>gb|ACE80717.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = -1
Query: 262 LMKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVPDRGF 83
L K RGV+K+PGQ+WI V+++VH F V+D+ HPQ+ EI+ L L + M EAGYVPD F
Sbjct: 15 LRKERGVKKLPGQTWIEVENQVHAFVVDDKAHPQIREIHAELQRLHVRMEEAGYVPDTRF 74
>ref|XP_004494006.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like, partial [Cicer arietinum]
Length = 817
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = -1
Query: 262 LMKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVP 95
LMK GV+KVPGQSWI VKD++HVF ED HPQ IY +L +L L++++ GY P
Sbjct: 714 LMKQMGVQKVPGQSWIEVKDKIHVFFSEDSSHPQSSNIYTMLEELWLQVLDDGYDP 769
>ref|XP_007034693.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508713722|gb|EOY05619.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 788
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/60 (51%), Positives = 43/60 (71%)
Frame = -1
Query: 262 LMKNRGVRKVPGQSWIRVKDRVHVFSVEDRLHPQMGEIYMVLGDLCLEMMEAGYVPDRGF 83
LM++RGV K PG SW+ V+++VHVF V+D +HP++ +Y L L LEM + GYVPD F
Sbjct: 644 LMRDRGVHKEPGCSWVEVENKVHVFLVDDAVHPEVQAVYNYLSQLVLEMRKLGYVPDTKF 703