BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00027789
         (1127 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]    86   2e-26
ref|XP_006827613.1| hypothetical protein AMTR_s00009p00241390 [A...    74   3e-18
gb|EYU32118.1| hypothetical protein MIMGU_mgv1a019324mg, partial...    65   3e-16
ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containi...    61   1e-15
gb|EXB85809.1| hypothetical protein L484_009655 [Morus notabilis]      60   3e-15
gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygr...    71   1e-13
ref|XP_003623821.1| Pentatricopeptide repeat-containing protein ...    74   3e-13
ref|XP_007161628.1| hypothetical protein PHAVU_001G085300g [Phas...    69   2e-12
ref|XP_003624492.1| Pentatricopeptide repeat-containing protein ...    66   3e-12
ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containi...    74   3e-12
ref|XP_004492675.1| PREDICTED: pentatricopeptide repeat-containi...    70   3e-12
ref|XP_001764438.1| predicted protein [Physcomitrella patens] gi...    64   4e-12
ref|XP_004493071.1| PREDICTED: putative pentatricopeptide repeat...    67   4e-12
ref|XP_007207552.1| hypothetical protein PRUPE_ppa017672mg [Prun...    62   5e-12
ref|XP_004292867.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-12
ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat...    69   1e-11
ref|XP_004309259.1| PREDICTED: pentatricopeptide repeat-containi...    63   1e-11
ref|XP_004954053.1| PREDICTED: pentatricopeptide repeat-containi...    66   2e-11
ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-11
ref|XP_007051809.1| Basic helix-loop-helix DNA-binding superfami...    76   3e-11

>emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
          Length = 826

 Score = 86.3 bits (212), Expect(2) = 2e-26
 Identities = 54/139 (38%), Positives = 79/139 (56%), Gaps = 7/139 (5%)
 Frame = +1

Query: 589 HKLFDEFPQRNAVLWNSLFGISY------IAFHESIIETEFSSHAYTD-LVAWTASISGL 747
           +K+F+E  QRN  + NS + + Y       A++E  +E     H   D +++WT+ IS L
Sbjct: 9   YKVFEEITQRNVFIRNSAYSLYYRSMFNTYAYYEEPVEF----HGEKDNVISWTSKISSL 64

Query: 748 ARSSRKQEAIGAFKSMLLQGLRLDHVTLWSVINAFSALDCRETTWVIHGFVIKLGLESEL 927
            + ++ + A+G FK ML+   R +HVT+ SVI A S L   +   VI G VIKLG ESE+
Sbjct: 65  VKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEV 124

Query: 928 PVVTALLGL*FYPQDGNGV 984
            V TAL+G  FY     G+
Sbjct: 125 SVATALIG--FYSDYDMGI 141



 Score = 61.2 bits (147), Expect(2) = 2e-26
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = +2

Query: 959  STHKMAMVWQLFDHVPTKDSVLWSAMVVACWKNGQFI*AIDTFREMQLSGRVVPNH 1126
            S + M +VW++F+  P KD VLWSAMV AC K+GQ+  A + FR MQ  G V PNH
Sbjct: 135  SDYDMGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDG-VEPNH 189


>ref|XP_006827613.1| hypothetical protein AMTR_s00009p00241390 [Amborella trichopoda]
           gi|548832233|gb|ERM95029.1| hypothetical protein
           AMTR_s00009p00241390 [Amborella trichopoda]
          Length = 222

 Score = 74.3 bits (181), Expect(2) = 3e-18
 Identities = 35/81 (43%), Positives = 54/81 (66%)
 Frame = +1

Query: 712 DLVAWTASISGLARSSRKQEAIGAFKSMLLQGLRLDHVTLWSVINAFSALDCRETTWVIH 891
           ++ +WTA ISG AR+ R Q+A+  F  ML  G+R ++++L  +I   S +   + T  IH
Sbjct: 54  NVFSWTAMISGYARNGRAQDALDFFNGMLYSGIRPNYISLLVIIRVVSQIFAEQKTSEIH 113

Query: 892 GFVIKLGLESELPVVTALLGL 954
           GFV++ G ESE PV+T+L+GL
Sbjct: 114 GFVMRNGFESEAPVITSLIGL 134



 Score = 45.4 bits (106), Expect(2) = 3e-18
 Identities = 28/65 (43%), Positives = 36/65 (55%)
 Frame = +2

Query: 932  LLQLFWASNSTHKMAMVWQLFDHVPTKDSVLWSAMVVACWKNGQFI*AIDTFREMQLSGR 1111
            L+ L+ + N T    +   LFD    KD +LW+AMV  C +NG  + AI  FREM  SG 
Sbjct: 131  LIGLYSSHNDTKSAFL---LFDRAIMKDLILWTAMVSVCSQNGLSVEAIKFFREMLNSGN 187

Query: 1112 VVPNH 1126
              PNH
Sbjct: 188  -EPNH 191


>gb|EYU32118.1| hypothetical protein MIMGU_mgv1a019324mg, partial [Mimulus
           guttatus]
          Length = 499

 Score = 65.1 bits (157), Expect(2) = 3e-16
 Identities = 34/79 (43%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
 Frame = +1

Query: 721 AWTASISGLARSSRKQEAIGAFKSMLLQGLRLDHVTLWSVINAFSALDCRETTWVIHGFV 900
           +W+  IS L   +R +EAIG FK+ML+ G R + VT+ SV+ A  +L  ++    IHG+ 
Sbjct: 16  SWSFRISSLVSENRSEEAIGLFKAMLVSGDRPNFVTVLSVVKAVGSLGSKDLACGIHGYS 75

Query: 901 IKLGL-ESELPVVTALLGL 954
           IK GL +S++ +VTAL+G+
Sbjct: 76  IKTGLIDSQVAIVTALVGV 94



 Score = 47.8 bits (112), Expect(2) = 3e-16
 Identities = 24/52 (46%), Positives = 32/52 (61%)
 Frame = +2

Query: 971  MAMVWQLFDHVPTKDSVLWSAMVVACWKNGQFI*AIDTFREMQLSGRVVPNH 1126
            M   W+LF+    KD V+ SAMV AC  NG+   A+  F+EM L G ++PNH
Sbjct: 100  MRSAWKLFNRARNKDVVMCSAMVFACVSNGEHSEALKLFKEMLLCG-ILPNH 150


>ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Vitis vinifera]
          Length = 804

 Score = 61.2 bits (147), Expect(2) = 1e-15
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = +2

Query: 959  STHKMAMVWQLFDHVPTKDSVLWSAMVVACWKNGQFI*AIDTFREMQLSGRVVPNH 1126
            S + M +VW++F+  P KD VLWSAMV AC K+GQ+  A + FR MQ  G V PNH
Sbjct: 56   SDYDMGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDG-VEPNH 110



 Score = 49.7 bits (117), Expect(2) = 1e-15
 Identities = 31/64 (48%), Positives = 38/64 (59%)
 Frame = +1

Query: 793 MLLQGLRLDHVTLWSVINAFSALDCRETTWVIHGFVIKLGLESELPVVTALLGL*FYPQD 972
           ML+   R +HVT+ SVI A S L   +   VI G VIKLG ESE+ V TAL+G  FY   
Sbjct: 1   MLMTEQRPNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSVATALIG--FYSDY 58

Query: 973 GNGV 984
             G+
Sbjct: 59  DMGI 62


>gb|EXB85809.1| hypothetical protein L484_009655 [Morus notabilis]
          Length = 879

 Score = 60.5 bits (145), Expect(2) = 3e-15
 Identities = 35/121 (28%), Positives = 61/121 (50%)
 Frame = +1

Query: 592 KLFDEFPQRNAVLWNSLFGISYIAFHESIIETEFSSHAYTDLVAWTASISGLARSSRKQE 771
           K FDE P+R++V WN++     +     I ++ F +    D+V+W + ISG  ++   Q 
Sbjct: 97  KTFDEMPERDSVSWNTMISGYSVRGKMEIAQSLFDAMPRRDVVSWNSLISGYLQNGDYQN 156

Query: 772 AIGAFKSMLLQGLRLDHVTLWSVINAFSALDCRETTWVIHGFVIKLGLESELPVVTALLG 951
           +IG    M   G+ LD  +L  ++ A SA++  +     HG   K G   ++   +ALL 
Sbjct: 157 SIGVCLQMSSFGVGLDPTSLALILKACSAMEYLDFGIQFHGIAFKTGYVVDVVTGSALLD 216

Query: 952 L 954
           +
Sbjct: 217 M 217



 Score = 49.3 bits (116), Expect(2) = 3e-15
 Identities = 20/47 (42%), Positives = 31/47 (65%)
 Frame = +2

Query: 968  KMAMVWQLFDHVPTKDSVLWSAMVVACWKNGQFI*AIDTFREMQLSG 1108
            K+   +Q+FD +P K+ V WSAM+  C +N QF+  ++ FR MQ+ G
Sbjct: 223  KLKFSFQVFDELPKKNWVSWSAMIAGCIQNDQFVNGLEMFRRMQIEG 269


>gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score = 71.2 bits (173), Expect(2) = 1e-13
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
 Frame = +1

Query: 523 QISRIHVSDSRSLA---LNCYSTIG-----HKLFDEFPQRNAVLWNSLFGISYIAFHESI 678
           +IS++     RSL     N Y+  G      ++F +   +N V W SL  +       + 
Sbjct: 411 EISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTS 470

Query: 679 IETEFSSHAYTDLVAWTASISGLARSSRKQEAIGAFKSMLLQGLRLDHVTLWSVINAFSA 858
            E  FS  +  ++V+W   I+G A+S    +      SM ++G + D VT+ S++ A  A
Sbjct: 471 AEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGA 530

Query: 859 LDCRETTWVIHGFVIKLGLESELPVVTALLGL 954
           L   E   ++H   +KLGLES+  V T+L+G+
Sbjct: 531 LSALERGKLVHAEAVKLGLESDTVVATSLIGM 562



 Score = 33.1 bits (74), Expect(2) = 1e-13
 Identities = 17/45 (37%), Positives = 27/45 (60%)
 Frame = +2

Query: 989  LFDHVPTKDSVLWSAMVVACWKNGQFI*AIDTFREMQLSGRVVPN 1123
            +FD +  +D+V W+AM+    ++G    A+D F+ M L  RV PN
Sbjct: 575  VFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRM-LKERVPPN 618


>ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498836|gb|AES80039.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 837

 Score = 73.6 bits (179), Expect(2) = 3e-13
 Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
 Frame = +1

Query: 592 KLFDEFPQRNAVLWNSLFGISYIAFHESIIETE-FSSHAYTDLVAWTASISGLARSSRKQ 768
           KLFD+ PQ++   WN++   SY+     +   E F   +    + W++ ISG  +   K 
Sbjct: 86  KLFDKMPQKDEYSWNTMIS-SYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKV 144

Query: 769 EAIGAFKSMLLQGLRLDHVTLWSVINAFSALDCRETTWVIHGFVIKLGLESELPVVTALL 948
           EA   F+SM L+G +    TL SV+   S+L   +T  +IHGFV+K G E  + VVT L+
Sbjct: 145 EAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLV 204

Query: 949 GL 954
            +
Sbjct: 205 DM 206



 Score = 29.3 bits (64), Expect(2) = 3e-13
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +2

Query: 1010 KDSVLWSAMVVACWKNGQFI*AIDTFREMQLSG 1108
            K+ VLW+AMV    +NG    A++ FR M   G
Sbjct: 228  KNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQG 260


>ref|XP_007161628.1| hypothetical protein PHAVU_001G085300g [Phaseolus vulgaris]
           gi|561035092|gb|ESW33622.1| hypothetical protein
           PHAVU_001G085300g [Phaseolus vulgaris]
          Length = 862

 Score = 69.3 bits (168), Expect(2) = 2e-12
 Identities = 39/119 (32%), Positives = 61/119 (51%)
 Frame = +1

Query: 592 KLFDEFPQRNAVLWNSLFGISYIAFHESIIETEFSSHAYTDLVAWTASISGLARSSRKQE 771
           KLFDE P RN +  N++      + + S   + F       +V WT  I G A++++ +E
Sbjct: 110 KLFDEMPHRNIISTNTMITGYLNSGNLSAARSLFDGMVERSVVTWTMLIGGYAQNNKFRE 169

Query: 772 AIGAFKSMLLQGLRLDHVTLWSVINAFSALDCRETTWVIHGFVIKLGLESELPVVTALL 948
           A G F  M    +  DHVTL ++++ F+  D       +H  V+KLG +S L V  +LL
Sbjct: 170 AFGLFVDMCRHDMAPDHVTLTTLLSGFTEFDNVNEVAQVHAHVVKLGYDSTLTVCNSLL 228



 Score = 30.4 bits (67), Expect(2) = 2e-12
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 962  THKMAMVWQLFDHVPTKDSVLWSAMVVACWKNGQFI*AIDTFREMQLSG 1108
            T  + +   LF H+P KD+V ++ ++    K G    AI+ F +MQ  G
Sbjct: 234  TRSLGLACHLFKHMPEKDNVTFNVLLTGYSKEGFNHEAINLFFKMQNLG 282


>ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499507|gb|AES80710.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score = 66.2 bits (160), Expect(2) = 3e-12
 Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
 Frame = +1

Query: 592 KLFDEFPQRNAVLWNSLFGISYI-AFHESIIETEFSSHAYTDLVAWTASISGLARSSRKQ 768
           KLFDE P +N    N++  + YI + + S   T F S      V WT  I G A++++ +
Sbjct: 122 KLFDEMPHKNIFSTNTMI-MGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFR 180

Query: 769 EAIGAFKSMLLQGLRLDHVTLWSVINAFSALDCRETTWVIHGFVIKLGLESELPVVTALL 948
           EA G F  M   G+  DHV+L ++++ F+  D       +H  VIKLG +S L V  +LL
Sbjct: 181 EAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLL 240



 Score = 33.1 bits (74), Expect(2) = 3e-12
 Identities = 17/49 (34%), Positives = 29/49 (59%)
 Frame = +2

Query: 962  THKMAMVWQLFDHVPTKDSVLWSAMVVACWKNGQFI*AIDTFREMQLSG 1108
            T  + + +QLF+ +P +DSV ++A++    K G    AI+ F +MQ  G
Sbjct: 246  TRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVG 294


>ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score = 73.6 bits (179), Expect(2) = 3e-12
 Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
 Frame = +1

Query: 592 KLFDEFP--QRNAVLWNSLFGISYIAFHESIIETEFSSHAYTDLVAWTASISGLARSSRK 765
           +LFDE P  QRN   WNSL  +   +   +     F+     D V+WT  + GL R  R 
Sbjct: 84  RLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRF 143

Query: 766 QEAIGAFKSMLLQGLRLDHVTLWSVINAFSALDCRETTWVIHGFVIKLGLESELPVVTAL 945
            EAI  F  M+  GL     TL +V+++ +A + R     +H FV+KLGL S +PV  ++
Sbjct: 144 GEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSV 203

Query: 946 LGL 954
           L +
Sbjct: 204 LNM 206



 Score = 25.8 bits (55), Expect(2) = 3e-12
 Identities = 13/52 (25%), Positives = 26/52 (50%)
 Frame = +2

Query: 968  KMAMVWQLFDHVPTKDSVLWSAMVVACWKNGQFI*AIDTFREMQLSGRVVPN 1123
            +M +   LF+++P +  V W+A++    +NG    A+  F  M     + P+
Sbjct: 243  RMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPD 294


>ref|XP_004492675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cicer arietinum]
          Length = 785

 Score = 69.7 bits (169), Expect(2) = 3e-12
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
 Frame = +1

Query: 592 KLFDEFPQRNAVLWNSLFGISYIAFHESIIETE-FSSHAYTDLVAWTASISGLARSSRKQ 768
           KLFD+ P ++   WN++    Y+   + +   E F   +    + W++ ISG  +   K 
Sbjct: 60  KLFDKMPLKDEYSWNTMIS-GYVNVGKLVEARELFDGFSCRSSITWSSLISGYCKFGCKV 118

Query: 769 EAIGAFKSMLLQGLRLDHVTLWSVINAFSALDCRETTWVIHGFVIKLGLESELPVVTALL 948
           EA   F+SM L+G +    TL SV+   S+L   +T  +IHG+V+K G ES + VVT L+
Sbjct: 119 EAFDLFRSMRLEGQKPTQYTLGSVLRVCSSLGLIQTGELIHGYVVKNGFESNVFVVTGLV 178

Query: 949 GL 954
            +
Sbjct: 179 DM 180



 Score = 29.6 bits (65), Expect(2) = 3e-12
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 1010 KDSVLWSAMVVACWKNGQFI*AIDTFREMQLSGRV 1114
            K+ VLW+AMV    +NG    A++ FR M   G V
Sbjct: 202  KNHVLWTAMVTGYAQNGDGYKAVEFFRYMHTQGVV 236


>ref|XP_001764438.1| predicted protein [Physcomitrella patens]
           gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella
           patens] gi|162684302|gb|EDQ70705.1| predicted protein
           [Physcomitrella patens]
          Length = 868

 Score = 63.5 bits (153), Expect(2) = 4e-12
 Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
 Frame = +1

Query: 523 QISRIHVSDSRSLA---LNCYSTIG-----HKLFDEFPQRNAVLWNSLFGISYIAFHESI 678
           ++S++     RSL     N Y+  G      ++F +   +N V W S   +       S 
Sbjct: 389 ELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSS 448

Query: 679 IETEFSSHAYTDLVAWTASISGLARSSRKQEAIGAFKSMLLQGLRLDHVTLWSVINAFSA 858
            E  FS     ++V+W   I+G A++    +      SM  +G + D VT+ +++ A  A
Sbjct: 449 AEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGA 508

Query: 859 LDCRETTWVIHGFVIKLGLESELPVVTALLGL 954
           L   E   ++H   +KLGLES+  V T+L+G+
Sbjct: 509 LAGLERGKLVHAEAVKLGLESDTVVATSLIGM 540



 Score = 35.4 bits (80), Expect(2) = 4e-12
 Identities = 17/45 (37%), Positives = 28/45 (62%)
 Frame = +2

Query: 989  LFDHVPTKDSVLWSAMVVACWKNGQFI*AIDTFREMQLSGRVVPN 1123
            +FD +  +D+V W+AM+    ++G  + A+D F+ M L  RV PN
Sbjct: 553  VFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRM-LKERVSPN 596


>ref|XP_004493071.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cicer arietinum]
          Length = 812

 Score = 67.4 bits (163), Expect(2) = 4e-12
 Identities = 44/120 (36%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
 Frame = +1

Query: 592 KLFDEFPQRNAVLWNSLFGISYI-AFHESIIETEFSSHAYTDLVAWTASISGLARSSRKQ 768
           KLFDE P +N    N++  + YI + + S   T F S      V WT  I G A+++R  
Sbjct: 60  KLFDEMPHKNIFSTNTMI-MGYIKSGNLSEARTLFDSMFERTAVTWTMLIGGYAQNNRFS 118

Query: 769 EAIGAFKSMLLQGLRLDHVTLWSVINAFSALDCRETTWVIHGFVIKLGLESELPVVTALL 948
           EA G F  M   G+  DHV+L ++++ F+  D       +H  VIKLG +S L V  +LL
Sbjct: 119 EAFGLFAEMGRHGIDHDHVSLATLLSGFTEFDSVNEVRQVHTHVIKLGYDSTLVVCNSLL 178



 Score = 31.6 bits (70), Expect(2) = 4e-12
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +2

Query: 962  THKMAMVWQLFDHVPTKDSVLWSAMVVACWKNGQFI*AIDTFREMQLSG 1108
            T  + +   LF+ VP +DSV ++A++    K G    AI+ F EMQ  G
Sbjct: 184  TRNLELACHLFNDVPERDSVTFNALLTGYSKEGFNNEAINLFFEMQELG 232


>ref|XP_007207552.1| hypothetical protein PRUPE_ppa017672mg [Prunus persica]
           gi|462403194|gb|EMJ08751.1| hypothetical protein
           PRUPE_ppa017672mg [Prunus persica]
          Length = 745

 Score = 60.5 bits (145), Expect(2) = 5e-12
 Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
 Frame = +1

Query: 595 LFDEFPQRNAVLWNSLFGISYIAFHESIIETE----FSSHAYTDLVAWTASISGLARSSR 762
           ++D  P+RN +  NS+     + F  +   TE    F+     D+V+W+A IS   ++  
Sbjct: 166 IYDRMPERNTIASNSMI----VLFGRTGCVTEACRLFNELPEKDMVSWSALISCYEQNEM 221

Query: 763 KQEAIGAFKSMLLQGLRLDHVTLWSVINAFSALDCRETTWVIHGFVIKLGLESELPVVTA 942
            +EA+  F  M+  G+ +D V + +V++A + L    T  +IHG V+K+G+E+ + +  A
Sbjct: 222 YEEALALFLRMVANGVMVDEVVVVTVLSACARLSIVHTGKLIHGLVVKIGIEAYVNLQNA 281

Query: 943 LL 948
            +
Sbjct: 282 FI 283



 Score = 38.1 bits (87), Expect(2) = 5e-12
 Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
 Frame = +2

Query: 926  YQLLQLFWAS--NSTHKMAMVWQ---LFDHVPTKDSVLWSAMVVACWKNGQFI*AIDTFR 1090
            Y L Q+ W S  +   K  +V +   LFD +P KD V WSAM+    ++ +F   +  F+
Sbjct: 303  YHLDQISWNSMISGYLKCGLVEKARTLFDSMPKKDIVSWSAMISGYAQHDRFSETLALFQ 362

Query: 1091 EMQLSG 1108
            EMQL G
Sbjct: 363  EMQLRG 368



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
 Frame = +1

Query: 565 LNCYSTIGH-----KLFDEFPQRNAVLWNSLFGISYIAFHESIIETEFSSHAYTDLVAWT 729
           ++ YS+ G      KLF+     + + WNS+              T F S    D+V+W+
Sbjct: 283 IHMYSSCGEIMAAQKLFNAAYHLDQISWNSMISGYLKCGLVEKARTLFDSMPKKDIVSWS 342

Query: 730 ASISGLARSSRKQEAIGAFKSMLLQGLRLDHVTLWSVINAFSALDCRETTWVIHGFVIKL 909
           A ISG A+  R  E +  F+ M L+G+R D  TL SV++A + L   +    IH ++ K 
Sbjct: 343 AMISGYAQHDRFSETLALFQEMQLRGIRPDETTLVSVVSACTHLAALDLGQWIHAYIRKN 402

Query: 910 GLESELPVVTALLGL 954
           GL+  + + T L+ +
Sbjct: 403 GLKINVFLGTTLINM 417


>ref|XP_004292867.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Fragaria vesca subsp. vesca]
          Length = 544

 Score = 58.9 bits (141), Expect(2) = 7e-12
 Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
 Frame = +1

Query: 589 HKLFDEFPQRNAVLWNSLFGISYIAFHESI-IETEFSSHAYTDLVAWTASISGLARSSRK 765
           HK+FDE  +R+ + WNSL    Y+   +       F   +   +V+WTA +SG  R    
Sbjct: 172 HKVFDEMTERDVISWNSLLS-GYVRLGQMTKARAVFEEMSDKSIVSWTAMVSGYTRIGCY 230

Query: 766 QEAIGAFKSMLLQGLRLDHVTLWSVINAFSALDCRETTWVIHGFVIKLGLESELPVVTAL 945
            +A+  F+ M + G+  D +++ SV+ A S L   E    IH +  K  L   + V  AL
Sbjct: 231 GDALEIFRRMQMLGIEPDEISVVSVLPACSQLGALEVGKWIHRYSDKKRLLQSVSVCNAL 290

Query: 946 L 948
           +
Sbjct: 291 I 291



 Score = 39.3 bits (90), Expect(2) = 7e-12
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +2

Query: 983  WQLFDHVPTKDSVLWSAMVVACWKNGQFI*AIDTFREMQ 1099
            WQLFD +  +D + WS M+     NG+   A++ F+EMQ
Sbjct: 304  WQLFDQMSGRDVISWSTMIAGLANNGKAHEAVELFQEMQ 342


>ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score = 68.6 bits (166), Expect(2) = 1e-11
 Identities = 38/119 (31%), Positives = 61/119 (51%)
 Frame = +1

Query: 592 KLFDEFPQRNAVLWNSLFGISYIAFHESIIETEFSSHAYTDLVAWTASISGLARSSRKQE 771
           KLFDE P +N +  N++      + + S   + F S     +V WT  I G A+ +R  E
Sbjct: 63  KLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLE 122

Query: 772 AIGAFKSMLLQGLRLDHVTLWSVINAFSALDCRETTWVIHGFVIKLGLESELPVVTALL 948
           A   F  M   G+  DH+TL ++++ F+  +       +HG V+K+G +S L V  +LL
Sbjct: 123 AFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLL 181



 Score = 28.5 bits (62), Expect(2) = 1e-11
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +2

Query: 962  THKMAMVWQLFDHVPTKDSVLWSAMVVACWKNGQFI*AIDTFREMQ 1099
            T  + +   LF H+  KD+V ++A++    K G    AI+ F +MQ
Sbjct: 187  TRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQ 232


>ref|XP_004309259.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Fragaria vesca subsp. vesca]
          Length = 511

 Score = 63.2 bits (152), Expect(2) = 1e-11
 Identities = 44/138 (31%), Positives = 75/138 (54%), Gaps = 8/138 (5%)
 Frame = +1

Query: 565 LNCYSTIG-----HKLFDEFPQRNAVLWNSLF-GISYIAFHESIIETEFSSHAYTDLVAW 726
           +N YS  G      K+FDE  +R+ V WNS+  G       +  IE  F       + +W
Sbjct: 158 MNMYSVFGSLICARKVFDEITERDVVSWNSMIKGYLRSGDLDEAIEV-FREMKKRSVFSW 216

Query: 727 TASISGLARSSRKQEAIGAFKSM-LLQGLRLDHVTLWSVINAFSAL-DCRETTWVIHGFV 900
            + I+G  +  R +EA+  F  M +++G+R D +T+ SV+ A + L +    TWV HG++
Sbjct: 217 NSIITGCVQGGRAREALDFFHEMQVVEGVRPDKITIASVLAACAHLGEVDNGTWV-HGYL 275

Query: 901 IKLGLESELPVVTALLGL 954
            + G+ES++ + TAL+ +
Sbjct: 276 RRSGVESDVVIGTALVDM 293



 Score = 33.9 bits (76), Expect(2) = 1e-11
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = +2

Query: 983  WQLFDHVPTKDSVLWSAMVVACWKNGQFI*AIDTFREMQLSGRVVPNH 1126
            +++F  +P KD++ W+AM+     +G    A D F +M+ +G V PNH
Sbjct: 304  YEVFMEMPKKDTLAWTAMISVFALHGFGNEAFDLFEKMEAAG-VEPNH 350


>ref|XP_004954053.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Setaria italica]
          Length = 496

 Score = 66.2 bits (160), Expect(2) = 2e-11
 Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
 Frame = +1

Query: 592 KLFDEFPQRNAVLWNSLF-GISYIAFHESIIETEFSSHAYTDLVAWTASISGLARSSRKQ 768
           +LFD  P R+ V +N++  G+      ++  E  F      D V+WTA I G  ++ R  
Sbjct: 128 QLFDSMPVRSIVTYNTMISGLMRNGLVDAAFEV-FDGMPEPDKVSWTALIDGCVKNGRHD 186

Query: 769 EAIGAFKSMLLQGLRLDHVTLWSVINAFSALDCRETTWVIHGFVIKLGLESELPVVTALL 948
           +AI  F++MLL G+  D+VTL +V++A + +        +H  V++ GLE  + V  +L+
Sbjct: 187 DAIDCFRAMLLNGVEPDYVTLIAVVSACAEVGALGLGMWVHRLVVRQGLERNVRVANSLI 246

Query: 949 GL 954
            +
Sbjct: 247 DM 248



 Score = 30.4 bits (67), Expect(2) = 2e-11
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +2

Query: 986  QLFDHVPTKDSVLWSAMVVACWKNGQFI*AIDTFREMQLSG 1108
            Q+F  +  +  V W++M+V    NG+   AI+ F EMQ  G
Sbjct: 260  QVFRSMRKRTVVSWNSMIVGFAANGRCTDAIELFEEMQRQG 300


>ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
           gi|449528041|ref|XP_004171015.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score = 60.5 bits (145), Expect(2) = 2e-11
 Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
 Frame = +1

Query: 571 CYSTIGHKLFDEFPQRNAVLWNSL-FGISYIAFHESIIETEFSSHAYTDLVAWTASISGL 747
           C     +K+F+E PQR+ V WN++ FG +     E       S   + D+V+W + ISG 
Sbjct: 73  CALEYAYKVFEEMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGY 132

Query: 748 ARSSRKQEAIGAFKSMLLQGLRLDHVTLWSVINAFSALDCRETTWVIHGFVIKLGLESEL 927
            ++   Q++I  F  M   G+  DH TL   +   S L+ +     IHG  +++G + ++
Sbjct: 133 LQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDV 192

Query: 928 PVVTALLGL 954
              +AL+ +
Sbjct: 193 VTGSALVDM 201



 Score = 35.8 bits (81), Expect(2) = 2e-11
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 989  LFDHVPTKDSVLWSAMVVACWKNGQFI*AIDTFREMQLSG 1108
            +F  +P K+ + WSA +  C +N Q +  +  F+EMQ  G
Sbjct: 214  VFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKG 253


>ref|XP_007051809.1| Basic helix-loop-helix DNA-binding superfamily protein [Theobroma
           cacao] gi|508704070|gb|EOX95966.1| Basic
           helix-loop-helix DNA-binding superfamily protein
           [Theobroma cacao]
          Length = 1279

 Score = 75.9 bits (185), Expect = 3e-11
 Identities = 35/79 (44%), Positives = 54/79 (68%)
 Frame = +1

Query: 715 LVAWTASISGLARSSRKQEAIGAFKSMLLQGLRLDHVTLWSVINAFSALDCRETTWVIHG 894
           +++WT+ +S L R  + +EAIG FK+ML+   R ++VT+ S++ AF  LD      ++HG
Sbjct: 702 VISWTSVLSKLVRQGQPEEAIGLFKTMLMSNQRPNYVTILSLVKAFDTLDWEALRMMVHG 761

Query: 895 FVIKLGLESELPVVTALLG 951
            VIK+G ESE  V+TAL+G
Sbjct: 762 LVIKMGFESEPSVLTALIG 780



 Score = 41.2 bits (95), Expect(2) = 1e-06
 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
 Frame = +1

Query: 712  DLVAWTASISGLARSSRKQEAIGAFKSMLLQGLRLDHVTLWSVINAFSALDCRETT---- 879
            D++AW A IS  A++     AI  F+ MLL   +    +L S++   S +  +E +    
Sbjct: 1004 DVIAWNAMISAYAQTGLPFNAINTFRQMLLMNEKPSEFSLVSLLQICSLMASQEVSDKVG 1063

Query: 880  WVIHGFVIKLGLESELPVVTALL 948
              IH FV K+G    + + +AL+
Sbjct: 1064 ETIHAFVAKVGYSRNVYLSSALI 1086



 Score = 38.9 bits (89), Expect(2) = 1e-06
 Identities = 21/45 (46%), Positives = 27/45 (60%)
 Frame = +2

Query: 989  LFDHVPTKDSVLWSAMVVACWKNGQFI*AIDTFREMQLSGRVVPN 1123
            LFD VPTKD + WS+M+     NG  I A++TF  M L   + PN
Sbjct: 1101 LFDEVPTKDLICWSSMINGYVLNGYGIEALETFANM-LDCGIKPN 1144