BLASTX nr result
ID: Sinomenium21_contig00027679
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00027679
(389 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 117 2e-24
ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [... 106 4e-21
ref|XP_006487001.1| PREDICTED: RNA pseudouridine synthase 4, mit... 101 9e-20
ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mit... 101 9e-20
ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr... 101 9e-20
ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [A... 100 3e-19
ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mit... 99 6e-19
ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prun... 99 6e-19
ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prun... 99 6e-19
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [... 99 6e-19
ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 98 1e-18
gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis] 96 7e-18
ref|XP_006651552.1| PREDICTED: RNA pseudouridine synthase 4, mit... 96 7e-18
ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Popu... 94 2e-17
ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mit... 93 3e-17
ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mit... 93 3e-17
tpg|DAA60657.1| TPA: hypothetical protein ZEAMMB73_133926 [Zea m... 93 4e-17
tpg|DAA60656.1| TPA: hypothetical protein ZEAMMB73_133926 [Zea m... 93 4e-17
gb|ACR37582.1| unknown [Zea mays] 93 4e-17
gb|EEE69173.1| hypothetical protein OsJ_28343 [Oryza sativa Japo... 92 7e-17
>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
product [Vitis vinifera]
Length = 476
Score = 117 bits (292), Expect = 2e-24
Identities = 56/71 (78%), Positives = 62/71 (87%)
Frame = -3
Query: 384 HPFGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTSLDRDLSKLESLEFVAPLPW 205
HPFGL+LESGSI +KQP LHLHC+QMVLPNVSL LQ +Q S + DLS+LESLEFVAPLP
Sbjct: 406 HPFGLDLESGSILDKQPHLHLHCKQMVLPNVSLALQNLQLSAECDLSELESLEFVAPLPS 465
Query: 204 HMQRSWDILTS 172
HMQRSWDIL S
Sbjct: 466 HMQRSWDILNS 476
>ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
gi|508706469|gb|EOX98365.1| Ribosomal pseudouridine
synthase, putative [Theobroma cacao]
Length = 477
Score = 106 bits (264), Expect = 4e-21
Identities = 49/72 (68%), Positives = 60/72 (83%)
Frame = -3
Query: 387 MHPFGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTSLDRDLSKLESLEFVAPLP 208
M PFGLN++SGSIS K+P+LHLHCR+M+ PNVS LQ +Q S D DLSKL+SLE VAPLP
Sbjct: 406 MLPFGLNMDSGSISAKRPRLHLHCREMIFPNVSQALQNLQLSTDHDLSKLKSLEVVAPLP 465
Query: 207 WHMQRSWDILTS 172
+MQ+SWDI+ S
Sbjct: 466 SYMQKSWDIMNS 477
>ref|XP_006487001.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X3 [Citrus sinensis]
Length = 275
Score = 101 bits (252), Expect = 9e-20
Identities = 47/69 (68%), Positives = 58/69 (84%)
Frame = -3
Query: 378 FGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTSLDRDLSKLESLEFVAPLPWHM 199
FGL+LESGSI EKQP+LHLHC++M LPNVS +Q++Q S D+SKLE+L+ VAPLP HM
Sbjct: 207 FGLDLESGSILEKQPRLHLHCKEMTLPNVSQAIQKVQLSSGCDVSKLETLKLVAPLPSHM 266
Query: 198 QRSWDILTS 172
QRSWD+L S
Sbjct: 267 QRSWDVLNS 275
>ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X1 [Citrus sinensis] gi|568867349|ref|XP_006487000.1|
PREDICTED: RNA pseudouridine synthase 4,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 362
Score = 101 bits (252), Expect = 9e-20
Identities = 47/69 (68%), Positives = 58/69 (84%)
Frame = -3
Query: 378 FGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTSLDRDLSKLESLEFVAPLPWHM 199
FGL+LESGSI EKQP+LHLHC++M LPNVS +Q++Q S D+SKLE+L+ VAPLP HM
Sbjct: 294 FGLDLESGSILEKQPRLHLHCKEMTLPNVSQAIQKVQLSSGCDVSKLETLKLVAPLPSHM 353
Query: 198 QRSWDILTS 172
QRSWD+L S
Sbjct: 354 QRSWDVLNS 362
>ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
gi|557524859|gb|ESR36165.1| hypothetical protein
CICLE_v10028283mg [Citrus clementina]
Length = 494
Score = 101 bits (252), Expect = 9e-20
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = -3
Query: 378 FGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTSLDRDLSKLESLEFVAPLPWHM 199
FGL+LESGSI EKQP LHLHC++M LPNVS +Q++Q S D+SKLESL+ VAPLP HM
Sbjct: 426 FGLDLESGSILEKQPGLHLHCKEMTLPNVSQAIQKVQLSSGCDVSKLESLKLVAPLPSHM 485
Query: 198 QRSWDILTS 172
QRSWD+L S
Sbjct: 486 QRSWDVLNS 494
>ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [Amborella trichopoda]
gi|548850328|gb|ERN08832.1| hypothetical protein
AMTR_s00015p00025410 [Amborella trichopoda]
Length = 457
Score = 100 bits (248), Expect = 3e-19
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = -3
Query: 381 PFGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTSLDRDLSKLESLEFVAPLPWH 202
PFGL+LE GS+S+K+P+LHLHCRQM LPN+SL Q + DLSKLE L+ VAPLP H
Sbjct: 385 PFGLDLEGGSVSDKKPRLHLHCRQMTLPNMSLAFQHLHEQSVDDLSKLEKLDLVAPLPLH 444
Query: 201 MQRSWDILTS 172
M+RSWDIL S
Sbjct: 445 MRRSWDILNS 454
>ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like
[Solanum tuberosum]
Length = 467
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/70 (64%), Positives = 56/70 (80%)
Frame = -3
Query: 381 PFGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTSLDRDLSKLESLEFVAPLPWH 202
PF L L +GSIS+KQP LHLHC++MVLPN+SL LQR Q D DL +ES++ VAPLP+H
Sbjct: 398 PFNLRLGNGSISDKQPHLHLHCKEMVLPNISLALQRAQVVSDTDLVDVESIKLVAPLPFH 457
Query: 201 MQRSWDILTS 172
MQ+SWD L+S
Sbjct: 458 MQKSWDCLSS 467
>ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
gi|462395210|gb|EMJ01009.1| hypothetical protein
PRUPE_ppa004969mg [Prunus persica]
Length = 483
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/70 (67%), Positives = 56/70 (80%)
Frame = -3
Query: 381 PFGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTSLDRDLSKLESLEFVAPLPWH 202
PF LN+ESGS+SEK P+LHLHC+QMVLPNV+L LQ ++ D DLS+LESLE VA LP
Sbjct: 414 PFDLNMESGSVSEKNPRLHLHCKQMVLPNVNLALQNVKLHSDSDLSELESLELVAALPSF 473
Query: 201 MQRSWDILTS 172
MQRSW+I S
Sbjct: 474 MQRSWNITNS 483
>ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
gi|462395209|gb|EMJ01008.1| hypothetical protein
PRUPE_ppa004969mg [Prunus persica]
Length = 481
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/70 (67%), Positives = 56/70 (80%)
Frame = -3
Query: 381 PFGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTSLDRDLSKLESLEFVAPLPWH 202
PF LN+ESGS+SEK P+LHLHC+QMVLPNV+L LQ ++ D DLS+LESLE VA LP
Sbjct: 412 PFDLNMESGSVSEKNPRLHLHCKQMVLPNVNLALQNVKLHSDSDLSELESLELVAALPSF 471
Query: 201 MQRSWDILTS 172
MQRSW+I S
Sbjct: 472 MQRSWNITNS 481
>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 536
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/70 (67%), Positives = 58/70 (82%)
Frame = -3
Query: 381 PFGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTSLDRDLSKLESLEFVAPLPWH 202
PFG++LESGSISEK P+LHLHC+QMVLP+VS L+ +QTS + D S L+S+E APLP +
Sbjct: 467 PFGIDLESGSISEKHPRLHLHCKQMVLPDVSQALRGVQTSSNYDFSDLKSIELDAPLPSY 526
Query: 201 MQRSWDILTS 172
MQRSWDIL S
Sbjct: 527 MQRSWDILNS 536
>ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Solanum
lycopersicum]
Length = 467
Score = 97.8 bits (242), Expect = 1e-18
Identities = 44/70 (62%), Positives = 56/70 (80%)
Frame = -3
Query: 381 PFGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTSLDRDLSKLESLEFVAPLPWH 202
PF L L +GSIS+KQP LHLHC++MVLPN+SL LQR Q D DL +ES++ VAPLP+H
Sbjct: 398 PFNLRLGNGSISDKQPHLHLHCKEMVLPNISLALQRAQVVSDADLVDVESIKLVAPLPFH 457
Query: 201 MQRSWDILTS 172
MQ+SWD L++
Sbjct: 458 MQKSWDCLSA 467
>gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]
Length = 470
Score = 95.5 bits (236), Expect = 7e-18
Identities = 43/70 (61%), Positives = 56/70 (80%)
Frame = -3
Query: 381 PFGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTSLDRDLSKLESLEFVAPLPWH 202
PFGLN+++GSISEK P+LHLHC+QMVLPN+S +LQ +Q D +LS+LE L+ APLP +
Sbjct: 401 PFGLNMDNGSISEKHPRLHLHCKQMVLPNISHVLQNVQRYSDYELSRLERLKLDAPLPSY 460
Query: 201 MQRSWDILTS 172
MQRSW + S
Sbjct: 461 MQRSWHLTNS 470
>ref|XP_006651552.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like [Oryza
brachyantha]
Length = 447
Score = 95.5 bits (236), Expect = 7e-18
Identities = 43/70 (61%), Positives = 56/70 (80%)
Frame = -3
Query: 381 PFGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTSLDRDLSKLESLEFVAPLPWH 202
PFGL + GSI+E+QPQLHLHC+QMVLP++S+ + R+Q+ +D D S LE L FVAPLP H
Sbjct: 375 PFGLVVGGGSIAEEQPQLHLHCKQMVLPDISVAVHRLQSDVDPDFSDLEKLNFVAPLPLH 434
Query: 201 MQRSWDILTS 172
M+ SW+IL S
Sbjct: 435 MRLSWEILKS 444
>ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
gi|550331407|gb|EEE87831.2| hypothetical protein
POPTR_0009s09860g [Populus trichocarpa]
Length = 471
Score = 94.4 bits (233), Expect = 2e-17
Identities = 45/68 (66%), Positives = 56/68 (82%)
Frame = -3
Query: 381 PFGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTSLDRDLSKLESLEFVAPLPWH 202
PF L+L+SGSISEK P+LHLHC+QMVLP+VS LQ +Q S D D S+L SL+F APLP +
Sbjct: 402 PFALDLDSGSISEKHPRLHLHCKQMVLPDVSKALQDVQLSSDYDFSQLASLKFDAPLPPY 461
Query: 201 MQRSWDIL 178
M++SWDIL
Sbjct: 462 MKKSWDIL 469
>ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X2 [Glycine max]
Length = 429
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/67 (64%), Positives = 52/67 (77%)
Frame = -3
Query: 381 PFGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTSLDRDLSKLESLEFVAPLPWH 202
PFGLNL GSISE P+LHLHC+QMVLPN+S LQ +Q++ DLS +E LE VA LP +
Sbjct: 360 PFGLNLNKGSISENHPRLHLHCKQMVLPNISQALQNVQSASSCDLSLVEELELVADLPPY 419
Query: 201 MQRSWDI 181
MQRSWD+
Sbjct: 420 MQRSWDV 426
>ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X1 [Glycine max]
Length = 427
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/67 (64%), Positives = 52/67 (77%)
Frame = -3
Query: 381 PFGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTSLDRDLSKLESLEFVAPLPWH 202
PFGLNL GSISE P+LHLHC+QMVLPN+S LQ +Q++ DLS +E LE VA LP +
Sbjct: 358 PFGLNLNKGSISENHPRLHLHCKQMVLPNISQALQNVQSASSCDLSLVEELELVADLPPY 417
Query: 201 MQRSWDI 181
MQRSWD+
Sbjct: 418 MQRSWDV 424
>tpg|DAA60657.1| TPA: hypothetical protein ZEAMMB73_133926 [Zea mays]
Length = 549
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/71 (60%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Frame = -3
Query: 381 PFGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTS-LDRDLSKLESLEFVAPLPW 205
PFGL L GS++E+QPQLHLHC+QM+LP++S +Q++++S D D S LE L FVAPLP
Sbjct: 476 PFGLTLGGGSVAEQQPQLHLHCKQMILPDISAAMQQLRSSDADHDFSDLEKLSFVAPLPL 535
Query: 204 HMQRSWDILTS 172
HMQ SW IL S
Sbjct: 536 HMQLSWKILLS 546
>tpg|DAA60656.1| TPA: hypothetical protein ZEAMMB73_133926 [Zea mays]
Length = 503
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/71 (60%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Frame = -3
Query: 381 PFGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTS-LDRDLSKLESLEFVAPLPW 205
PFGL L GS++E+QPQLHLHC+QM+LP++S +Q++++S D D S LE L FVAPLP
Sbjct: 430 PFGLTLGGGSVAEQQPQLHLHCKQMILPDISAAMQQLRSSDADHDFSDLEKLSFVAPLPL 489
Query: 204 HMQRSWDILTS 172
HMQ SW IL S
Sbjct: 490 HMQLSWKILLS 500
>gb|ACR37582.1| unknown [Zea mays]
Length = 272
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/71 (60%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Frame = -3
Query: 381 PFGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTS-LDRDLSKLESLEFVAPLPW 205
PFGL L GS++E+QPQLHLHC+QM+LP++S +Q++++S D D S LE L FVAPLP
Sbjct: 199 PFGLTLGGGSVAEQQPQLHLHCKQMILPDISAAMQQLRSSDADHDFSDLEKLSFVAPLPL 258
Query: 204 HMQRSWDILTS 172
HMQ SW IL S
Sbjct: 259 HMQLSWKILLS 269
>gb|EEE69173.1| hypothetical protein OsJ_28343 [Oryza sativa Japonica Group]
Length = 465
Score = 92.0 bits (227), Expect = 7e-17
Identities = 45/71 (63%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Frame = -3
Query: 381 PFGLNLESGSISEKQPQLHLHCRQMVLPNVSLILQRIQTS-LDRDLSKLESLEFVAPLPW 205
PFGL + GSI+E+QPQLHLHC+QMVLP+VS+ L R+Q+S ++ D S LE L FVAPLP
Sbjct: 392 PFGLVVGGGSIAEEQPQLHLHCKQMVLPDVSVALHRLQSSDVNPDFSDLEKLNFVAPLPL 451
Query: 204 HMQRSWDILTS 172
HM+ SW+IL S
Sbjct: 452 HMRLSWEILKS 462