BLASTX nr result
ID: Sinomenium21_contig00027593
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00027593
(494 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007216664.1| hypothetical protein PRUPE_ppb017187mg [Prun... 88 1e-15
ref|XP_004303560.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containi... 81 1e-13
emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera] 81 1e-13
ref|XP_007049326.1| Tetratricopeptide repeat (TPR)-like superfam... 79 8e-13
ref|XP_004243565.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
ref|XP_006413152.1| hypothetical protein EUTSA_v10024897mg [Eutr... 74 2e-11
ref|XP_006447772.1| hypothetical protein CICLE_v10018243mg [Citr... 72 1e-10
ref|XP_006285690.1| hypothetical protein CARUB_v10007160mg [Caps... 71 2e-10
ref|XP_006469492.1| PREDICTED: pentatricopeptide repeat-containi... 70 2e-10
ref|XP_006362997.1| PREDICTED: pentatricopeptide repeat-containi... 70 2e-10
ref|XP_002869597.1| pentatricopeptide repeat-containing protein ... 70 3e-10
ref|NP_194398.1| pentatricopeptide repeat-containing protein [Ar... 69 5e-10
ref|XP_004510327.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
ref|XP_003625044.1| Pentatricopeptide repeat-containing protein ... 65 7e-09
ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
ref|XP_002320514.2| hypothetical protein POPTR_0014s16390g [Popu... 62 8e-08
ref|XP_006843235.1| hypothetical protein AMTR_s00080p00074320 [A... 58 2e-06
gb|EPS73698.1| hypothetical protein M569_01057 [Genlisea aurea] 57 3e-06
>ref|XP_007216664.1| hypothetical protein PRUPE_ppb017187mg [Prunus persica]
gi|462412814|gb|EMJ17863.1| hypothetical protein
PRUPE_ppb017187mg [Prunus persica]
Length = 533
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/76 (57%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = +1
Query: 268 MNLSRVGRFSTFLGFAKNGPSSAESTSSAILG-RNWSFLPIPHRTIPEPKGQDLDFVNVA 444
MN +FS+ P+ T+ G RNW+ LPIPHRTIPEPKGQDLDFVNVA
Sbjct: 1 MNKFPFRQFSSLPNSIAKEPTFTNPTTCGKFGKRNWNPLPIPHRTIPEPKGQDLDFVNVA 60
Query: 445 HSHLVHRDWAKLNSLA 492
+SHL+H DWAKLNSL+
Sbjct: 61 NSHLIHSDWAKLNSLS 76
>ref|XP_004303560.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 539
Score = 84.3 bits (207), Expect = 2e-14
Identities = 36/43 (83%), Positives = 40/43 (93%)
Frame = +1
Query: 364 RNWSFLPIPHRTIPEPKGQDLDFVNVAHSHLVHRDWAKLNSLA 492
RNW+ +PIPHRTIPEPKGQDLDFVNV +SHL+H DWAKLNSLA
Sbjct: 34 RNWNPIPIPHRTIPEPKGQDLDFVNVVNSHLIHSDWAKLNSLA 76
>ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +1
Query: 292 FSTFLGFAKNGPSSAESTSSAILGRNWSFLPIPHRTIPEPKGQDLDFVNVAHSHLVHRDW 471
FST L A P+ R+W+ +P+PHRTIPEP+GQDLDFVNVAHSHL++ DW
Sbjct: 95 FSTLLNGAAKTPNYM---------RSWNPIPVPHRTIPEPRGQDLDFVNVAHSHLINSDW 145
Query: 472 AKLNSLA 492
AKLNS++
Sbjct: 146 AKLNSMS 152
>emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +1
Query: 292 FSTFLGFAKNGPSSAESTSSAILGRNWSFLPIPHRTIPEPKGQDLDFVNVAHSHLVHRDW 471
FST L A P+ R+W+ +P+PHRTIPEP+GQDLDFVNVAHSHL++ DW
Sbjct: 9 FSTLLNGAAKTPNYM---------RSWNPIPVPHRTIPEPRGQDLDFVNVAHSHLINSDW 59
Query: 472 AKLNSLA 492
AKLNS++
Sbjct: 60 AKLNSMS 66
>ref|XP_007049326.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao] gi|508701587|gb|EOX93483.1| Tetratricopeptide
repeat (TPR)-like superfamily protein [Theobroma cacao]
Length = 532
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +1
Query: 289 RFSTFLGFAKNGPSSAESTSSAILGRNWSFLPIPHRTIPEPKGQDLDFVNVAHSHLVHRD 468
+FST L K P + + RNW +PIP RTIPEP+GQDLDFVNVAHSHL+H D
Sbjct: 9 QFSTLLDSVKLKPFNDGISRR----RNWYPIPIPFRTIPEPRGQDLDFVNVAHSHLIHSD 64
Query: 469 WAKLNSLA 492
W KLN+L+
Sbjct: 65 WDKLNALS 72
>ref|XP_004243565.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Solanum lycopersicum]
Length = 530
Score = 77.4 bits (189), Expect = 2e-12
Identities = 40/73 (54%), Positives = 47/73 (64%)
Frame = +1
Query: 274 LSRVGRFSTFLGFAKNGPSSAESTSSAILGRNWSFLPIPHRTIPEPKGQDLDFVNVAHSH 453
L ++ +FSTFL KN S A +P+PHRTI EPKGQDLDFVNVAHSH
Sbjct: 4 LKQIRKFSTFLDSTKN-THQVFVKSIATKQSKLDPIPLPHRTISEPKGQDLDFVNVAHSH 62
Query: 454 LVHRDWAKLNSLA 492
LVH DW KL +L+
Sbjct: 63 LVHSDWTKLENLS 75
>ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 77.4 bits (189), Expect = 2e-12
Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = +1
Query: 289 RFSTFLGFAKNGPSSAESTSSAILG-RNWSFLPIPHRTIPEPKGQDLDFVNVAHSHLVHR 465
RFST LG +S LG RN +PIPHR+IPEP+G DLDFVNV HSHL+H
Sbjct: 8 RFSTLLGSVPRTYASISPKFDLSLGKRNRDSIPIPHRSIPEPRGPDLDFVNVVHSHLIHS 67
Query: 466 DWAKLNSLA 492
DW+KL+ L+
Sbjct: 68 DWSKLDCLS 76
>ref|XP_006413152.1| hypothetical protein EUTSA_v10024897mg [Eutrema salsugineum]
gi|557114322|gb|ESQ54605.1| hypothetical protein
EUTSA_v10024897mg [Eutrema salsugineum]
Length = 528
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/69 (50%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = +1
Query: 289 RFSTFLGFAKNGPSSAEST-SSAILGRNWSFLPIPHRTIPEPKGQDLDFVNVAHSHLVHR 465
+FS+F G+ P S S +++ N + +PIPHR+ PEPKGQDLDFVNVAHSHL+
Sbjct: 15 QFSSFAGYGGLVPGSESPRFSKSLVSGNRNAIPIPHRSNPEPKGQDLDFVNVAHSHLIQS 74
Query: 466 DWAKLNSLA 492
DW +L+ L+
Sbjct: 75 DWDQLDKLS 83
>ref|XP_006447772.1| hypothetical protein CICLE_v10018243mg [Citrus clementina]
gi|557550383|gb|ESR61012.1| hypothetical protein
CICLE_v10018243mg [Citrus clementina]
Length = 565
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +1
Query: 268 MNLSRVGRFSTFLGFAKNGPSSAE-STSSAILGRNWSFLPIPHRTIPEPKGQDLDFVNVA 444
+N+ + R ST + P+ S S + N + +PIPHRT+P+PKGQD DFVN+A
Sbjct: 26 INVFPLRRLSTMVTTLDKNPTFINPSVSENSMKMNRNPIPIPHRTLPDPKGQDFDFVNIA 85
Query: 445 HSHLVHRDWAKLNSLA 492
+SHL+H DW KL +L+
Sbjct: 86 YSHLIHSDWKKLTALS 101
>ref|XP_006285690.1| hypothetical protein CARUB_v10007160mg [Capsella rubella]
gi|482554395|gb|EOA18588.1| hypothetical protein
CARUB_v10007160mg [Capsella rubella]
Length = 513
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/68 (54%), Positives = 45/68 (66%)
Frame = +1
Query: 289 RFSTFLGFAKNGPSSAESTSSAILGRNWSFLPIPHRTIPEPKGQDLDFVNVAHSHLVHRD 468
RFS+F G K P +++ +A + PIPHR PEPKGQDLDFVNVAHSHL+ D
Sbjct: 10 RFSSFAGSEK--PRLSKNLGAASI-------PIPHRRNPEPKGQDLDFVNVAHSHLIQSD 60
Query: 469 WAKLNSLA 492
W KLN L+
Sbjct: 61 WDKLNKLS 68
>ref|XP_006469492.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568830409|ref|XP_006469493.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform X2 [Citrus sinensis]
gi|568830411|ref|XP_006469494.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform X3 [Citrus sinensis]
Length = 565
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = +1
Query: 268 MNLSRVGRFSTFLGFAKNGPSSAE-STSSAILGRNWSFLPIPHRTIPEPKGQDLDFVNVA 444
+N+ R ST + P+ S S + N + +PIPHRT+PEPKGQD DFVN+
Sbjct: 26 INVFPFRRLSTMVTTLDKNPTFINPSVSENSMKMNRNPIPIPHRTLPEPKGQDFDFVNIT 85
Query: 445 HSHLVHRDWAKLNSLA 492
+SHL+H DW KL +L+
Sbjct: 86 YSHLIHSDWKKLTALS 101
>ref|XP_006362997.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Solanum tuberosum]
Length = 530
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Frame = +1
Query: 274 LSRVGRFSTFLGFAKNGPSSAESTSSAILGRNWSF--LPIPHRTIPEPKGQDLDFVNVAH 447
L ++ +FSTF+ K+ + + I + +P+PHRTI +PKGQDLDFVNVAH
Sbjct: 4 LKQIRKFSTFIDSTKH---THQVFVKLITPKRSKLDPIPLPHRTISDPKGQDLDFVNVAH 60
Query: 448 SHLVHRDWAKLNSLA 492
SHL+H DW KL +L+
Sbjct: 61 SHLIHSDWTKLENLS 75
>ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297315433|gb|EFH45856.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 538
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/69 (49%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = +1
Query: 289 RFSTFLGFAKN-GPSSAESTSSAILGRNWSFLPIPHRTIPEPKGQDLDFVNVAHSHLVHR 465
++S+F G+ ++ P +++ +A + PIPHR+ PEPKGQDLDFVNVAHSHL+
Sbjct: 15 QYSSFAGYGRSENPRLSKNPPAANI-------PIPHRSNPEPKGQDLDFVNVAHSHLIQS 67
Query: 466 DWAKLNSLA 492
DW KLN L+
Sbjct: 68 DWDKLNKLS 76
>ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186944|ref|NP_001190849.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g26680, mitochondrial; Flags: Precursor
gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis
thaliana] gi|7269520|emb|CAB79523.1| putative protein
[Arabidopsis thaliana] gi|332659836|gb|AEE85236.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana] gi|332659837|gb|AEE85237.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 69.3 bits (168), Expect = 5e-10
Identities = 37/76 (48%), Positives = 46/76 (60%)
Frame = +1
Query: 265 GMNLSRVGRFSTFLGFAKNGPSSAESTSSAILGRNWSFLPIPHRTIPEPKGQDLDFVNVA 444
G+N +FS+F G++ + T A + PIPHR PEPKGQDLDFVNVA
Sbjct: 7 GVNRRLRYQFSSFAGYSGSENPRLFKTLGA------ANTPIPHRRNPEPKGQDLDFVNVA 60
Query: 445 HSHLVHRDWAKLNSLA 492
HSHL+ DW KLN L+
Sbjct: 61 HSHLIQSDWDKLNKLS 76
>ref|XP_004510327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cicer arietinum]
Length = 515
Score = 67.0 bits (162), Expect = 3e-09
Identities = 26/39 (66%), Positives = 34/39 (87%)
Frame = +1
Query: 376 FLPIPHRTIPEPKGQDLDFVNVAHSHLVHRDWAKLNSLA 492
+LPIPH+TIP+PKGQDLDF+NV HS+++H W KLN L+
Sbjct: 23 YLPIPHQTIPQPKGQDLDFINVFHSNIIHSQWEKLNPLS 61
>ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500059|gb|AES81262.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 521
Score = 65.5 bits (158), Expect = 7e-09
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +1
Query: 376 FLPIPHRTIPEPKGQDLDFVNVAHSHLVHRDWAKL 480
+LPIPHRT+P+PKGQDLDF+N+ HSH +H W KL
Sbjct: 25 YLPIPHRTLPQPKGQDLDFINIFHSHFIHSQWEKL 59
>ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 62.4 bits (150), Expect = 6e-08
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = +1
Query: 376 FLPIPHRTIPEPKGQDLDFVNVAHSHLVHRDWAKLNSLA 492
FLPIPHRTIPEP+GQDLDF+ VAH H+++ W KL L+
Sbjct: 26 FLPIPHRTIPEPRGQDLDFICVAHRHVINSHWEKLLPLS 64
>ref|XP_002320514.2| hypothetical protein POPTR_0014s16390g [Populus trichocarpa]
gi|550324329|gb|EEE98829.2| hypothetical protein
POPTR_0014s16390g [Populus trichocarpa]
Length = 506
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +1
Query: 397 TIPEPKGQDLDFVNVAHSHLVHRDWAKLNSLA 492
TIPEPKGQDLDFVNV HSHL+H DW KLN L+
Sbjct: 14 TIPEPKGQDLDFVNVVHSHLIHSDWDKLNKLS 45
>ref|XP_006843235.1| hypothetical protein AMTR_s00080p00074320 [Amborella trichopoda]
gi|548845519|gb|ERN04910.1| hypothetical protein
AMTR_s00080p00074320 [Amborella trichopoda]
Length = 489
Score = 57.8 bits (138), Expect = 2e-06
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +1
Query: 400 IPEPKGQDLDFVNVAHSHLVHRDWAKLNSLA 492
+PEPKGQDLDF+N HSHL+H +W KLNSLA
Sbjct: 1 MPEPKGQDLDFINFVHSHLIHLEWPKLNSLA 31
>gb|EPS73698.1| hypothetical protein M569_01057 [Genlisea aurea]
Length = 500
Score = 56.6 bits (135), Expect = 3e-06
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Frame = +1
Query: 274 LSRVGRFSTFLGFAKNGP--SSAESTSSAILGRNWSFLPIPHRTIPEPKGQDLDFVNVAH 447
LS + +FS K+ P ++ ES+ A R + L +PHRT+P KGQDLD VNV +
Sbjct: 4 LSHLRKFSQ----TKSSPVRNAVESSLPADRNRKNAIL-LPHRTLPTAKGQDLDAVNVIY 58
Query: 448 SHLVHRDWAKLN 483
SHL+H DW KL+
Sbjct: 59 SHLIHSDWDKLD 70