BLASTX nr result
ID: Sinomenium21_contig00027125
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00027125
(434 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65988.1| hypothetical protein VITISV_042145 [Vitis vinifera] 88 7e-32
ref|NP_085513.1| hypothetical protein ArthMp046 [Arabidopsis tha... 84 3e-24
dbj|BAF01764.1| hypothetical protein [Arabidopsis thaliana] 83 3e-23
gb|AEX57688.1| hypothetical protein RasatMp057 (mitochondrion) [... 83 1e-14
ref|YP_717126.1| hypothetical protein BrnapMp028 [Brassica napus... 83 5e-14
emb|CBI39039.3| unnamed protein product [Vitis vinifera] 82 1e-13
>emb|CAN65988.1| hypothetical protein VITISV_042145 [Vitis vinifera]
Length = 150
Score = 87.8 bits (216), Expect(2) = 7e-32
Identities = 43/51 (84%), Positives = 46/51 (90%), Gaps = 1/51 (1%)
Frame = -3
Query: 177 TSLSI-KKALPRGEQKLQDEYVLDSRINSRPDPPWNFRNLQKHSRRGRVLL 28
T LSI KK LPRGEQKLQDEYVLDSRI+SRPDPPWNFRNL KHSRRG V++
Sbjct: 74 THLSIYKKPLPRGEQKLQDEYVLDSRIHSRPDPPWNFRNLPKHSRRGFVMI 124
Score = 75.5 bits (184), Expect(2) = 7e-32
Identities = 45/81 (55%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = -2
Query: 397 MALFWFLLFVSGLLCV-FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVQGHQMRDLP 221
MALF FLLFVSG LCV LVQGHQMRDLP
Sbjct: 1 MALFLFLLFVSGPLCVCVFFLRLIRGLLLWGIQFLFFLLLLISHRELLLLVQGHQMRDLP 60
Query: 220 PTPRNRSSGRLPSTHLSLYKK 158
PTPRNRSSGRLPSTHLS+YKK
Sbjct: 61 PTPRNRSSGRLPSTHLSIYKK 81
>ref|NP_085513.1| hypothetical protein ArthMp046 [Arabidopsis thaliana]
gi|42570727|ref|NP_973437.1| uncharacterized protein
[Arabidopsis thaliana]
gi|44888124|sp|P93308.1|M530_ARATH RecName:
Full=Uncharacterized mitochondrial protein AtMg00530;
AltName: Full=ORF109 gi|1785714|emb|CAA69737.1| unnamed
protein product [Arabidopsis thaliana]
gi|330250966|gb|AEC06060.1| uncharacterized protein
AT2G07776 [Arabidopsis thaliana]
Length = 109
Score = 84.3 bits (207), Expect(2) = 3e-24
Identities = 41/51 (80%), Positives = 46/51 (90%), Gaps = 1/51 (1%)
Frame = -3
Query: 177 TSLSI-KKALPRGEQKLQDEYVLDSRINSRPDPPWNFRNLQKHSRRGRVLL 28
T LSI KKALPRGE+KLQDEY LDSRI+SRPDP WNFRNLQKHSR+G V++
Sbjct: 52 THLSIHKKALPRGERKLQDEYALDSRIHSRPDPLWNFRNLQKHSRKGLVMI 102
Score = 53.5 bits (127), Expect(2) = 3e-24
Identities = 27/41 (65%), Positives = 31/41 (75%), Gaps = 9/41 (21%)
Frame = -2
Query: 250 VQGHQMRDLPPTPRNRSSGRL---------PSTHLSLYKKS 155
VQGHQMRDL PTPRNRS+GRL PSTHLS++KK+
Sbjct: 20 VQGHQMRDLLPTPRNRSNGRLPSPFSRVINPSTHLSIHKKA 60
>dbj|BAF01764.1| hypothetical protein [Arabidopsis thaliana]
Length = 109
Score = 82.8 bits (203), Expect(2) = 3e-23
Identities = 37/45 (82%), Positives = 42/45 (93%)
Frame = -3
Query: 162 KKALPRGEQKLQDEYVLDSRINSRPDPPWNFRNLQKHSRRGRVLL 28
KKALPRGE+KLQDEY LDSRI+SRPDP WNFRNLQKHSR+G V++
Sbjct: 58 KKALPRGERKLQDEYALDSRIHSRPDPLWNFRNLQKHSRKGLVMI 102
Score = 51.6 bits (122), Expect(2) = 3e-23
Identities = 26/41 (63%), Positives = 30/41 (73%), Gaps = 9/41 (21%)
Frame = -2
Query: 250 VQGHQMRDLPPTPRNRSSGRL---------PSTHLSLYKKS 155
VQGHQMRDL PTPRNRS+GRL PSTHL ++KK+
Sbjct: 20 VQGHQMRDLLPTPRNRSNGRLPSPFSRVINPSTHLPIHKKA 60
>gb|AEX57688.1| hypothetical protein RasatMp057 (mitochondrion) [Raphanus sativus]
gi|443298178|gb|AGC81722.1| hypothetical protein
DCGMS_00620 (mitochondrion) [Raphanus sativus]
Length = 159
Score = 82.8 bits (203), Expect(2) = 1e-14
Identities = 37/45 (82%), Positives = 42/45 (93%)
Frame = -3
Query: 162 KKALPRGEQKLQDEYVLDSRINSRPDPPWNFRNLQKHSRRGRVLL 28
KKALPRGE+KLQDEY LDSRI+SRPDP WNFRNLQKHSR+G V++
Sbjct: 108 KKALPRGERKLQDEYALDSRIHSRPDPLWNFRNLQKHSRKGLVMI 152
Score = 22.3 bits (46), Expect(2) = 1e-14
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 220 PTPRNRSSGRLPSTHLSLYKKS 155
P+P +R R PS HLS++KK+
Sbjct: 91 PSPFSRV--RNPSPHLSIHKKA 110
>ref|YP_717126.1| hypothetical protein BrnapMp028 [Brassica napus]
gi|353526373|ref|YP_004927448.1| orf159 (mitochondrion)
[Brassica oleracea] gi|353526526|ref|YP_004927596.1|
orf159 (mitochondrion) [Brassica carinata]
gi|353526717|ref|YP_004927888.1| orf159 (mitochondrion)
[Brassica rapa subsp. oleifera]
gi|353531399|ref|YP_004927791.1| orf159 (mitochondrion)
[Brassica juncea] gi|37591072|dbj|BAC98874.1|
hypothetical protein [Brassica napus]
gi|335354905|gb|AEH43461.1| orf159 [Brassica rapa subsp.
oleifera] gi|335354918|gb|AEH43473.1| orf159 [Brassica
oleracea] gi|335355057|gb|AEH43611.1| orf159 [Brassica
carinata] gi|335355132|gb|AEH43685.1| orf159 [Brassica
juncea] gi|339511333|emb|CBX48388.1| unnamed protein
product [Brassica napus]
Length = 159
Score = 82.8 bits (203), Expect = 5e-14
Identities = 37/45 (82%), Positives = 42/45 (93%)
Frame = -3
Query: 162 KKALPRGEQKLQDEYVLDSRINSRPDPPWNFRNLQKHSRRGRVLL 28
KKALPRGE+KLQDEY LDSRI+SRPDP WNFRNLQKHSR+G V++
Sbjct: 108 KKALPRGERKLQDEYALDSRIHSRPDPLWNFRNLQKHSRKGLVMI 152
>emb|CBI39039.3| unnamed protein product [Vitis vinifera]
Length = 199
Score = 81.6 bits (200), Expect = 1e-13
Identities = 41/51 (80%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Frame = -3
Query: 177 TSLSI-KKALPRGEQKLQDEYVLDSRINSRPDPPWNFRNLQKHSRRGRVLL 28
T LSI KK L RGEQKLQDEYVLDSRI+SRPDPPWNF NL KHSRRG V++
Sbjct: 142 THLSIYKKPLSRGEQKLQDEYVLDSRIHSRPDPPWNFWNLPKHSRRGFVMI 192
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = -2
Query: 250 VQGHQMRDLPPTPRNRSSGRLPSTHLSLYKKSPSQ 146
VQGHQMRDLPPTPRNRSSGRLPSTHLS+YKK S+
Sbjct: 119 VQGHQMRDLPPTPRNRSSGRLPSTHLSIYKKPLSR 153