BLASTX nr result
ID: Sinomenium21_contig00027118
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00027118
(459 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus not... 82 6e-14
ref|XP_006650345.1| PREDICTED: DNA-directed RNA polymerase II su... 82 6e-14
ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II su... 82 6e-14
ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su... 82 6e-14
ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citr... 82 6e-14
ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Popu... 82 6e-14
ref|XP_004982317.1| PREDICTED: DNA-directed RNA polymerase II su... 82 6e-14
ref|XP_004982316.1| PREDICTED: DNA-directed RNA polymerase II su... 82 6e-14
gb|EMS54198.1| DNA-directed RNA polymerase II subunit RPB2 [Trit... 82 6e-14
ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II su... 82 6e-14
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 82 6e-14
tpg|DAA50300.1| TPA: putative DNA-directed RNA polymerase II sub... 82 6e-14
ref|XP_003561873.1| PREDICTED: DNA-directed RNA polymerase II su... 82 6e-14
dbj|BAJ88548.1| predicted protein [Hordeum vulgare subsp. vulgare] 82 6e-14
ref|XP_002466750.1| hypothetical protein SORBIDRAFT_01g013470 [S... 82 6e-14
gb|ACN34912.1| unknown [Zea mays] gi|413933608|gb|AFW68159.1| pu... 82 6e-14
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta... 82 6e-14
gb|EEE59590.1| hypothetical protein OsJ_11898 [Oryza sativa Japo... 82 6e-14
ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su... 82 6e-14
ref|NP_001050770.1| Os03g0646800 [Oryza sativa Japonica Group] g... 82 6e-14
>gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
Length = 1193
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 1142 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1179
>ref|XP_006650345.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Oryza
brachyantha]
Length = 1184
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 1135 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1172
>ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Citrus
sinensis]
Length = 1195
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 1143 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1180
>ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Solanum
tuberosum]
Length = 1191
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 1140 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citrus clementina]
gi|557525528|gb|ESR36834.1| hypothetical protein
CICLE_v10027701mg [Citrus clementina]
Length = 1195
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 1143 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1180
>ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Populus trichocarpa]
gi|550340301|gb|EEE85647.2| hypothetical protein
POPTR_0004s04320g [Populus trichocarpa]
Length = 1215
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 1164 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1201
>ref|XP_004982317.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like isoform
X2 [Setaria italica]
Length = 1190
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 1141 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1178
>ref|XP_004982316.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like isoform
X1 [Setaria italica]
Length = 1226
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 1177 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1214
>gb|EMS54198.1| DNA-directed RNA polymerase II subunit RPB2 [Triticum urartu]
Length = 1204
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 1130 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1167
>ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Fragaria
vesca subsp. vesca]
Length = 1191
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 1141 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1178
>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
Full=DNA-directed RNA polymerase II subunit RPB2;
Short=RNA polymerase II subunit 2; Short=RNA polymerase
II subunit B2; AltName: Full=DNA-directed RNA polymerase
II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
polymerase II subunit 2 [Solanum lycopersicum]
Length = 1191
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 1140 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>tpg|DAA50300.1| TPA: putative DNA-directed RNA polymerase II subunit family protein
[Zea mays]
Length = 362
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 313 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 350
>ref|XP_003561873.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like
[Brachypodium distachyon]
Length = 1228
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 1179 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1216
>dbj|BAJ88548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 263
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 215 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 252
>ref|XP_002466750.1| hypothetical protein SORBIDRAFT_01g013470 [Sorghum bicolor]
gi|241920604|gb|EER93748.1| hypothetical protein
SORBIDRAFT_01g013470 [Sorghum bicolor]
Length = 1218
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 1169 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1206
>gb|ACN34912.1| unknown [Zea mays] gi|413933608|gb|AFW68159.1| putative
DNA-directed RNA polymerase II subunit family protein
[Zea mays]
Length = 362
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 313 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 350
>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
II subunit, putative [Ricinus communis]
Length = 1194
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 1143 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1180
>gb|EEE59590.1| hypothetical protein OsJ_11898 [Oryza sativa Japonica Group]
Length = 1218
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 1169 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1206
>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
vinifera] gi|147841183|emb|CAN72948.1| hypothetical
protein VITISV_033708 [Vitis vinifera]
gi|302143287|emb|CBI21848.3| unnamed protein product
[Vitis vinifera]
Length = 1193
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 1142 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1179
>ref|NP_001050770.1| Os03g0646800 [Oryza sativa Japonica Group]
gi|113549241|dbj|BAF12684.1| Os03g0646800, partial
[Oryza sativa Japonica Group]
Length = 368
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 459 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 346
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT
Sbjct: 319 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 356