BLASTX nr result

ID: Sinomenium21_contig00027057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00027057
         (757 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002888381.1| expressed protein [Arabidopsis lyrata subsp....    56   5e-07

>ref|XP_002888381.1| expressed protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334222|gb|EFH64640.1| expressed protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 50

 Score = 55.8 bits (133), Expect(2) = 5e-07
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +3

Query: 579 GSDHRKNSPQANQPILCMGFTRWLEQRHIWL 671
           G DHRK+S + NQPI CMG T+WLEQRHIWL
Sbjct: 20  GYDHRKDSLKVNQPIPCMGLTQWLEQRHIWL 50



 Score = 25.0 bits (53), Expect(2) = 5e-07
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 527 HHSFYWILRSLFMHGMI 577
           H   YWILRS  +HG +
Sbjct: 3   HPLIYWILRSPLIHGSV 19


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