BLASTX nr result
ID: Sinomenium21_contig00027053
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00027053
(380 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 114 1e-23
ref|XP_004134454.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 111 9e-23
emb|CBI26203.3| unnamed protein product [Vitis vinifera] 105 7e-21
gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus not... 102 4e-20
ref|XP_003565158.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 102 4e-20
ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Popu... 102 6e-20
ref|XP_007222883.1| hypothetical protein PRUPE_ppa005191mg [Prun... 100 2e-19
gb|EEE67822.1| hypothetical protein OsJ_25587 [Oryza sativa Japo... 100 2e-19
sp|Q0JFN7.2|RH58_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA ... 100 2e-19
dbj|BAD87358.1| putative RNA helicase [Oryza sativa Japonica Group] 100 2e-19
ref|XP_006646732.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 100 4e-19
gb|EMT33062.1| hypothetical protein F775_42997 [Aegilops tauschii] 100 4e-19
ref|XP_004951318.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 99 6e-19
ref|XP_006290141.1| hypothetical protein CARUB_v10003807mg [Caps... 99 6e-19
dbj|BAK00276.1| predicted protein [Hordeum vulgare subsp. vulgare] 99 6e-19
ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 98 1e-18
ref|XP_007034658.1| P-loop containing nucleoside triphosphate hy... 98 1e-18
ref|XP_007034657.1| P-loop containing nucleoside triphosphate hy... 98 1e-18
ref|XP_007034656.1| P-loop containing nucleoside triphosphate hy... 98 1e-18
ref|XP_002871872.1| hypothetical protein ARALYDRAFT_488806 [Arab... 98 1e-18
>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Vitis vinifera]
Length = 482
Score = 114 bits (285), Expect = 1e-23
Identities = 57/89 (64%), Positives = 71/89 (79%)
Frame = -1
Query: 269 RLSNCSLNSASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVV 90
R+SN + N+ ++A+L + SS+ + + +R TLREIC+G VPEHVLRR EEVGF+V
Sbjct: 45 RVSNSNCNAKPAQATL---NSSSITEASDIGERTLTLREICQGCVPEHVLRRIEEVGFIV 101
Query: 89 PTDVQRQALPTLLSGRDCILHAQTGSGKT 3
PTDVQ+QALP LLSGRDCILHAQTGSGKT
Sbjct: 102 PTDVQQQALPVLLSGRDCILHAQTGSGKT 130
>ref|XP_004134454.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Cucumis sativus]
gi|449531697|ref|XP_004172822.1| PREDICTED: DEAD-box
ATP-dependent RNA helicase 58, chloroplastic-like
[Cucumis sativus]
Length = 473
Score = 111 bits (278), Expect = 9e-23
Identities = 54/82 (65%), Positives = 63/82 (76%)
Frame = -1
Query: 248 NSASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVVPTDVQRQ 69
+++ SR L SSL + E++ ASTLREIC G VPEH+LRR EE+GFV PTDVQRQ
Sbjct: 44 STSKSRPLQALLSSSSLKNVAESNFEASTLREICNGHVPEHILRRTEEIGFVAPTDVQRQ 103
Query: 68 ALPTLLSGRDCILHAQTGSGKT 3
ALP L SGRDC+LHAQTGSGKT
Sbjct: 104 ALPVLFSGRDCVLHAQTGSGKT 125
>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 105 bits (262), Expect = 7e-21
Identities = 55/93 (59%), Positives = 70/93 (75%), Gaps = 4/93 (4%)
Frame = -1
Query: 269 RLSNCSLNSASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLR----RAEEV 102
R+SN + N+ ++A+L + SS+ + + +R TLREIC+G VPEHV+ R EEV
Sbjct: 45 RVSNSNCNAKPAQATL---NSSSITEASDIGERTLTLREICQGCVPEHVIALICFRIEEV 101
Query: 101 GFVVPTDVQRQALPTLLSGRDCILHAQTGSGKT 3
GF+VPTDVQ+QALP LLSGRDCILHAQTGSGKT
Sbjct: 102 GFIVPTDVQQQALPVLLSGRDCILHAQTGSGKT 134
>gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus notabilis]
Length = 464
Score = 102 bits (255), Expect = 4e-20
Identities = 56/100 (56%), Positives = 67/100 (67%)
Frame = -1
Query: 302 HFVSPIQNPKPRLSNCSLNSASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHV 123
H +NP P L + S + S +P +SS D V QRA+TLR +CEG VPEHV
Sbjct: 21 HLPFRFRNPNPSLVSSIPRSPLAIRS-VPNLLSSAADAVPDEQRAATLRRLCEGLVPEHV 79
Query: 122 LRRAEEVGFVVPTDVQRQALPTLLSGRDCILHAQTGSGKT 3
+ EEVG++ PTDVQRQALP L SGRDC+LHAQTGSGKT
Sbjct: 80 V---EEVGYIEPTDVQRQALPILFSGRDCVLHAQTGSGKT 116
>ref|XP_003565158.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Brachypodium distachyon]
Length = 446
Score = 102 bits (255), Expect = 4e-20
Identities = 49/78 (62%), Positives = 61/78 (78%)
Frame = -1
Query: 236 SRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVVPTDVQRQALPT 57
S S PL S+ + + A+TLRE+C GRVP+HVL+RAE+VG+VVPT+VQ Q+LP
Sbjct: 23 SSPSYTPLAASTSRSGLRPLRAAATLREVCAGRVPDHVLQRAEDVGYVVPTEVQEQSLPV 82
Query: 56 LLSGRDCILHAQTGSGKT 3
LLSG+DCILHAQTGSGKT
Sbjct: 83 LLSGQDCILHAQTGSGKT 100
>ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Populus trichocarpa]
gi|550329495|gb|EEF01963.2| hypothetical protein
POPTR_0010s10230g [Populus trichocarpa]
Length = 477
Score = 102 bits (254), Expect = 6e-20
Identities = 53/85 (62%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Frame = -1
Query: 236 SRASLIPLH-------VSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVVPTDV 78
SR+S PL ++ + D + A TLREIC GRVPEH+LRR EEVG+ VPTDV
Sbjct: 45 SRSSFRPLKAILNSPSLTKVADDAKEKGEALTLREICLGRVPEHLLRRVEEVGYAVPTDV 104
Query: 77 QRQALPTLLSGRDCILHAQTGSGKT 3
Q+QALP L SGRDCILHAQTGSGKT
Sbjct: 105 QKQALPVLFSGRDCILHAQTGSGKT 129
>ref|XP_007222883.1| hypothetical protein PRUPE_ppa005191mg [Prunus persica]
gi|462419819|gb|EMJ24082.1| hypothetical protein
PRUPE_ppa005191mg [Prunus persica]
Length = 473
Score = 100 bits (250), Expect = 2e-19
Identities = 60/109 (55%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
Frame = -1
Query: 323 STKTTLAHFVSPIQNPKPRLSNCSLNSASSRASLIPLHVSSLNDTVETSQRAS--TLREI 150
S K AHF N PRL S N S S I ++S T E TLR+I
Sbjct: 20 SQKPRHAHFPFQSLNHSPRLF--SSNGFVSNCSPIQALLNSTPITTEAGSEPEPFTLRQI 77
Query: 149 CEGRVPEHVLRRAEEVGFVVPTDVQRQALPTLLSGRDCILHAQTGSGKT 3
C+ VP+HVL + EE+GFVVPT VQRQALPTL SGRDCILHAQTGSGKT
Sbjct: 78 CQSHVPDHVLCKMEELGFVVPTPVQRQALPTLFSGRDCILHAQTGSGKT 126
>gb|EEE67822.1| hypothetical protein OsJ_25587 [Oryza sativa Japonica Group]
Length = 395
Score = 100 bits (250), Expect = 2e-19
Identities = 50/81 (61%), Positives = 60/81 (74%)
Frame = -1
Query: 245 SASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVVPTDVQRQA 66
S + R+ L P + A+TLRE+C GRVPEHVL+RAEEVG+VVPT+VQ Q+
Sbjct: 12 STTLRSGLAPFTLRHRLRLRRLRASAATLREVCAGRVPEHVLQRAEEVGYVVPTEVQEQS 71
Query: 65 LPTLLSGRDCILHAQTGSGKT 3
LP LLSG+DCILHAQTGSGKT
Sbjct: 72 LPVLLSGQDCILHAQTGSGKT 92
>sp|Q0JFN7.2|RH58_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 58,
chloroplastic; Flags: Precursor
Length = 438
Score = 100 bits (250), Expect = 2e-19
Identities = 50/81 (61%), Positives = 60/81 (74%)
Frame = -1
Query: 245 SASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVVPTDVQRQA 66
S + R+ L P + A+TLRE+C GRVPEHVL+RAEEVG+VVPT+VQ Q+
Sbjct: 12 STTLRSGLAPFTLRHRLRLRRLRASAATLREVCAGRVPEHVLQRAEEVGYVVPTEVQEQS 71
Query: 65 LPTLLSGRDCILHAQTGSGKT 3
LP LLSG+DCILHAQTGSGKT
Sbjct: 72 LPVLLSGQDCILHAQTGSGKT 92
>dbj|BAD87358.1| putative RNA helicase [Oryza sativa Japonica Group]
Length = 377
Score = 100 bits (250), Expect = 2e-19
Identities = 50/81 (61%), Positives = 60/81 (74%)
Frame = -1
Query: 245 SASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVVPTDVQRQA 66
S + R+ L P + A+TLRE+C GRVPEHVL+RAEEVG+VVPT+VQ Q+
Sbjct: 12 STTLRSGLAPFTLRHRLRLRRLRASAATLREVCAGRVPEHVLQRAEEVGYVVPTEVQEQS 71
Query: 65 LPTLLSGRDCILHAQTGSGKT 3
LP LLSG+DCILHAQTGSGKT
Sbjct: 72 LPVLLSGQDCILHAQTGSGKT 92
>ref|XP_006646732.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Oryza brachyantha]
Length = 448
Score = 99.8 bits (247), Expect = 4e-19
Identities = 45/56 (80%), Positives = 53/56 (94%)
Frame = -1
Query: 170 ASTLREICEGRVPEHVLRRAEEVGFVVPTDVQRQALPTLLSGRDCILHAQTGSGKT 3
A+TLRE+C GRVPEHV++RAEEVG+VVPT+VQ Q+LP LLSG+DCILHAQTGSGKT
Sbjct: 47 AATLREVCAGRVPEHVIQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKT 102
>gb|EMT33062.1| hypothetical protein F775_42997 [Aegilops tauschii]
Length = 229
Score = 99.8 bits (247), Expect = 4e-19
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = -1
Query: 254 SLNSASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVVPTDVQ 75
+L S+ S L P S + + A+TLRE+C GRVP+HVL+RAE+VG++ PT+VQ
Sbjct: 20 TLISSPSSTRLAPFASRSRPRRLRAAAAAATLREVCSGRVPDHVLQRAEDVGYISPTEVQ 79
Query: 74 RQALPTLLSGRDCILHAQTGSGKT 3
Q+LP LLSG+DCILHAQTGSGKT
Sbjct: 80 EQSLPVLLSGQDCILHAQTGSGKT 103
>ref|XP_004951318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Setaria italica]
Length = 456
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/56 (80%), Positives = 53/56 (94%)
Frame = -1
Query: 170 ASTLREICEGRVPEHVLRRAEEVGFVVPTDVQRQALPTLLSGRDCILHAQTGSGKT 3
A+TLRE+C GRVP+HVL+RAEEVG+VVPT+VQ Q+LP LLSG+DCILHAQTGSGKT
Sbjct: 54 AATLREVCAGRVPDHVLQRAEEVGYVVPTEVQEQSLPLLLSGQDCILHAQTGSGKT 109
>ref|XP_006290141.1| hypothetical protein CARUB_v10003807mg [Capsella rubella]
gi|482558847|gb|EOA23039.1| hypothetical protein
CARUB_v10003807mg [Capsella rubella]
Length = 471
Score = 99.0 bits (245), Expect = 6e-19
Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 5/95 (5%)
Frame = -1
Query: 272 PRLSNCSLNSASSRASLIPLHV-----SSLNDTVETSQRASTLREICEGRVPEHVLRRAE 108
P + +L S+SS + + L S + T A TLR+IC+ VPEH+L R E
Sbjct: 32 PSFTTRALKSSSSASRINHLQALVDSFSEIESNSATETTALTLRQICQAFVPEHILHRME 91
Query: 107 EVGFVVPTDVQRQALPTLLSGRDCILHAQTGSGKT 3
E+GFV PTD+QR+ALPTL +GRDCILHAQTGSGKT
Sbjct: 92 EIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKT 126
>dbj|BAK00276.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 448
Score = 99.0 bits (245), Expect = 6e-19
Identities = 50/84 (59%), Positives = 64/84 (76%)
Frame = -1
Query: 254 SLNSASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVVPTDVQ 75
+L+S+ ASL P + T+ A+TLRE+C GRVP+HVL+RAE+VG+V PT+VQ
Sbjct: 20 TLSSSPRAASLAPFASRPRPRPLRTTA-AATLREVCSGRVPDHVLQRAEDVGYVSPTEVQ 78
Query: 74 RQALPTLLSGRDCILHAQTGSGKT 3
Q+LP LLSG+DCILHAQTGSGKT
Sbjct: 79 EQSLPVLLSGQDCILHAQTGSGKT 102
>ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Solanum tuberosum]
Length = 462
Score = 98.2 bits (243), Expect = 1e-18
Identities = 49/77 (63%), Positives = 58/77 (75%), Gaps = 5/77 (6%)
Frame = -1
Query: 218 PLHVSSLNDTVETS-----QRASTLREICEGRVPEHVLRRAEEVGFVVPTDVQRQALPTL 54
PL VS + VET+ +TLRE+C G V EHV+RRAEEVG+V+PT+VQ QALP L
Sbjct: 35 PLRVSFSSSNVETTTLTKDSSTTTLRELCYGHVQEHVIRRAEEVGYVIPTEVQLQALPFL 94
Query: 53 LSGRDCILHAQTGSGKT 3
SGRDC+LHAQTGSGKT
Sbjct: 95 FSGRDCVLHAQTGSGKT 111
>ref|XP_007034658.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 3 [Theobroma cacao]
gi|508713687|gb|EOY05584.1| P-loop containing nucleoside
triphosphate hydrolases superfamily protein isoform 3
[Theobroma cacao]
Length = 351
Score = 98.2 bits (243), Expect = 1e-18
Identities = 53/105 (50%), Positives = 68/105 (64%)
Frame = -1
Query: 317 KTTLAHFVSPIQNPKPRLSNCSLNSASSRASLIPLHVSSLNDTVETSQRASTLREICEGR 138
K T F+ +N LS+ + SA + S + L +ET+ + TLREIC+
Sbjct: 21 KPTTCRFLLQPRNRYLNLSSSANFSAKALFSSYNSNSVPLTKELETNCNSLTLREICQDH 80
Query: 137 VPEHVLRRAEEVGFVVPTDVQRQALPTLLSGRDCILHAQTGSGKT 3
VP+HVL R EE+G+V+PTDVQR+ALP L SG DCILHAQTGSGKT
Sbjct: 81 VPDHVLGRMEELGYVMPTDVQREALPVLFSGNDCILHAQTGSGKT 125
>ref|XP_007034657.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 2 [Theobroma cacao]
gi|508713686|gb|EOY05583.1| P-loop containing nucleoside
triphosphate hydrolases superfamily protein isoform 2
[Theobroma cacao]
Length = 409
Score = 98.2 bits (243), Expect = 1e-18
Identities = 53/105 (50%), Positives = 68/105 (64%)
Frame = -1
Query: 317 KTTLAHFVSPIQNPKPRLSNCSLNSASSRASLIPLHVSSLNDTVETSQRASTLREICEGR 138
K T F+ +N LS+ + SA + S + L +ET+ + TLREIC+
Sbjct: 21 KPTTCRFLLQPRNRYLNLSSSANFSAKALFSSYNSNSVPLTKELETNCNSLTLREICQDH 80
Query: 137 VPEHVLRRAEEVGFVVPTDVQRQALPTLLSGRDCILHAQTGSGKT 3
VP+HVL R EE+G+V+PTDVQR+ALP L SG DCILHAQTGSGKT
Sbjct: 81 VPDHVLGRMEELGYVMPTDVQREALPVLFSGNDCILHAQTGSGKT 125
>ref|XP_007034656.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 1 [Theobroma cacao]
gi|508713685|gb|EOY05582.1| P-loop containing nucleoside
triphosphate hydrolases superfamily protein isoform 1
[Theobroma cacao]
Length = 477
Score = 98.2 bits (243), Expect = 1e-18
Identities = 53/105 (50%), Positives = 68/105 (64%)
Frame = -1
Query: 317 KTTLAHFVSPIQNPKPRLSNCSLNSASSRASLIPLHVSSLNDTVETSQRASTLREICEGR 138
K T F+ +N LS+ + SA + S + L +ET+ + TLREIC+
Sbjct: 21 KPTTCRFLLQPRNRYLNLSSSANFSAKALFSSYNSNSVPLTKELETNCNSLTLREICQDH 80
Query: 137 VPEHVLRRAEEVGFVVPTDVQRQALPTLLSGRDCILHAQTGSGKT 3
VP+HVL R EE+G+V+PTDVQR+ALP L SG DCILHAQTGSGKT
Sbjct: 81 VPDHVLGRMEELGYVMPTDVQREALPVLFSGNDCILHAQTGSGKT 125
>ref|XP_002871872.1| hypothetical protein ARALYDRAFT_488806 [Arabidopsis lyrata subsp.
lyrata] gi|297317709|gb|EFH48131.1| hypothetical protein
ARALYDRAFT_488806 [Arabidopsis lyrata subsp. lyrata]
Length = 473
Score = 98.2 bits (243), Expect = 1e-18
Identities = 48/89 (53%), Positives = 58/89 (65%)
Frame = -1
Query: 269 RLSNCSLNSASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVV 90
R S NS + S + T A TLR+IC+G VPEH+L R EE+GF+
Sbjct: 40 RALKTSSNSRIINLQAVAETSSEIESNSATDTAALTLRKICQGFVPEHILHRMEEIGFIS 99
Query: 89 PTDVQRQALPTLLSGRDCILHAQTGSGKT 3
PTD+QR+ALPTL +GRDCILHAQTGSGKT
Sbjct: 100 PTDIQREALPTLFTGRDCILHAQTGSGKT 128