BLASTX nr result
ID: Sinomenium21_contig00026798
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00026798
(1308 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis] 57 2e-10
gb|EMS52533.1| ATP-citrate synthase [Triticum urartu] 66 4e-08
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840... 65 7e-08
gb|AEA51117.1| endonuclease-reverse transcriptase HmRTE-e01, par... 65 9e-08
gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tausc... 64 1e-07
gb|AAT40504.2| Polyprotein, putative [Solanum demissum] 64 1e-07
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas... 58 2e-07
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 64 2e-07
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ... 62 4e-07
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr... 59 6e-07
gb|ABB00038.1| reverse transcriptase family member [Glycine max] 59 5e-06
>gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis]
Length = 670
Score = 56.6 bits (135), Expect(2) = 2e-10
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Frame = -2
Query: 785 DFSIIVGLHSRSVVSLCVFSVIMDELSKCIIS----CWFF-DNIILIDKTKNRVNAKLVL 621
+F I +GLH S +S + +++MDEL++ I C FF +I+L+D+ + VN KL L
Sbjct: 367 EFPIRIGLHQGSALSPYLITIVMDELTREIQDRVPWCMFFAGDIVLVDEHREGVNRKLEL 426
Query: 620 WIQALET*CFRIV*LKIEYGKHNICRCTNISGE 522
W Q LET F++ K EY CR +N S +
Sbjct: 427 WKQTLETKGFKLSRTKTEYMH---CRFSNSSNQ 456
Score = 37.0 bits (84), Expect(2) = 2e-10
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = -1
Query: 414 KIKACEVNWSSASRILNDQYIPLEVLRKISLDN**ACHVYGMECYVINRQYVHRLSVL 241
+IKA V W + + +L D +P+++ K +YG EC+ I RQ++ ++SV+
Sbjct: 493 RIKAGWVKWKNVTGVLCDVEMPIKLKGKFYRTVIRPAMLYGSECWAIKRQHIAKMSVI 550
>gb|EMS52533.1| ATP-citrate synthase [Triticum urartu]
Length = 589
Score = 65.9 bits (159), Expect = 4e-08
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 12/145 (8%)
Frame = -2
Query: 962 EKTLHIIVIDLEKA**GT*DYNTVN-------FEEKKATNRYTRLDE*YLK*SDTDIYRK 804
+K LH++ IDLEKA Y+ + E+ K +Y L + T +
Sbjct: 406 KKDLHMVFIDLEKA------YDKIPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTS 459
Query: 803 NIGVNGDFSIIVGLHSRSVVSLCVFSVIMDELSKCIIS----CWFF-DNIILIDKTKNRV 639
N+ + DF I +GLH S +S +F+++MDE+++ I C F D+++L+D ++ V
Sbjct: 460 NVDTD-DFPIKIGLHQGSALSPYLFALVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGV 518
Query: 638 NAKLVLWIQALET*CFRIV*LKIEY 564
N KL LW Q LE+ FR+ K EY
Sbjct: 519 NRKLELWRQTLESKGFRLSRTKTEY 543
>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
distachyon]
Length = 567
Score = 65.1 bits (157), Expect = 7e-08
Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 12/147 (8%)
Frame = -2
Query: 962 EKTLHIIVIDLEKA**GT*DYNTVN-------FEEKKATNRYTRLDE*YLK*SDTDIYRK 804
+K LH++ IDLEKA Y+ + E+ K +Y L + T + R
Sbjct: 213 KKDLHMVFIDLEKA------YDKIPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSV-RT 265
Query: 803 NIGVNGDFSIIVGLHSRSVVSLCVFSVIMDELSKCIIS----CWFF-DNIILIDKTKNRV 639
+ G DF I +GLH S +S +F ++MDE+++ I C F D+++L+D ++ V
Sbjct: 266 SDGDTDDFPIKIGLHQGSALSPYLFDLVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGV 325
Query: 638 NAKLVLWIQALET*CFRIV*LKIEYGK 558
N KL LW Q LE+ FR+ K EY K
Sbjct: 326 NRKLELWRQILESKGFRLSRTKTEYMK 352
>gb|AEA51117.1| endonuclease-reverse transcriptase HmRTE-e01, partial [Oryzias
melastigma]
Length = 181
Score = 64.7 bits (156), Expect = 9e-08
Identities = 51/165 (30%), Positives = 86/165 (52%), Gaps = 13/165 (7%)
Frame = -2
Query: 965 GEKTLHIIVIDLEKA**GT*DYNTVNFEEKKATNRYTRLDE*YLK*SDTDIY-------R 807
G++ LH + +DLEKA Y+ V EE R + + E Y++ + D+Y R
Sbjct: 4 GQRELHCVFVDLEKA------YDRVPREELWYCMRKSEVTEKYVR-AVQDMYEGCKTVVR 56
Query: 806 KNIGVNGDFSIIVGLHSRSVVSLCVFSVIMDELSKCI--ISCW---FFDNIILIDKTKNR 642
+GV +F + VGLH S +S +F+++MD L+ + S W F D+I++ +++ +
Sbjct: 57 CAVGVTEEFKVEVGLHQGSALSPFLFAMVMDRLTDEVRQESPWTMMFADDIVICSESREQ 116
Query: 641 VNAKLVLWIQALET*CFRIV*LKIEY-GKHNICRCTNISGEIATI 510
V +L W ALE ++ K EY G H + R T +S +A +
Sbjct: 117 VEVELERWRFALERRGMKVSRSKTEYMGLHVVLRFTQLSQPLAAV 161
>gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tauschii]
Length = 1134
Score = 63.9 bits (154), Expect(2) = 1e-07
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 11/144 (7%)
Frame = -2
Query: 962 EKTLHIIVIDLEKA**GT*DYNTVN------FEEKKATNRYTRLDE*YLK*SDTDIYRKN 801
+K LH++ IDLEKA YN + ++ K +Y L + + T + +
Sbjct: 448 KKDLHMVFIDLEKA------YNKIPRNLWWALDKHKVPAKYITLIKDMYDNAVTSVRTSD 501
Query: 800 IGVNGDFSIIVGLHSRSVVSLCVFSVIMDELSKCIIS----CWFF-DNIILIDKTKNRVN 636
I + DF I +GLH S +S +F+++MDE+++ I C F D+++L+D ++ VN
Sbjct: 502 IDTD-DFPIKIGLHQGSALSPYLFALLMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVN 560
Query: 635 AKLVLWIQALET*CFRIV*LKIEY 564
KL LW Q LE+ R+ K EY
Sbjct: 561 RKLELWRQTLESKGLRLSRTKTEY 584
Score = 20.4 bits (41), Expect(2) = 1e-07
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 1035 FGYKLARLTIEAIYLL 988
FG+ R T+EAI+L+
Sbjct: 422 FGFMPGRSTMEAIFLV 437
>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
Length = 868
Score = 64.3 bits (155), Expect = 1e-07
Identities = 38/85 (44%), Positives = 56/85 (65%), Gaps = 8/85 (9%)
Frame = -2
Query: 794 VNGD---FSIIVGLHSRSVVSLCVFSVIMDELSKCIISC--W---FFDNIILIDKTKNRV 639
V GD F + +GLH SV+S +F+++MDEL++ I W F D+I+LID+T++RV
Sbjct: 392 VGGDSEHFPVEIGLHQGSVLSPFLFALVMDELTRSIQETVPWCMLFADDIVLIDETRDRV 451
Query: 638 NAKLVLWIQALET*CFRIV*LKIEY 564
NA+L +W Q LE+ FR+ K EY
Sbjct: 452 NARLEVWRQTLESKGFRLSRTKTEY 476
>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 517
Score = 57.8 bits (138), Expect(2) = 2e-07
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Frame = -2
Query: 962 EKTLHIIVIDLEKA**GT*DYNTVN-------FEEKKATNRYTRLDE*YLK*SDTDIYRK 804
+K LH++ DLEK Y+ V E+K+ Y R + + + T + +
Sbjct: 277 KKDLHLVFFDLEKG------YDRVPREILWKALEKKRVRIAYIRAIKDMYERASTSVKTQ 330
Query: 803 NIGVNGDFSIIVGLHSRSVVSLCVFSVIMDELSKCIIS----CWFF-DNIILIDKTKNRV 639
+ G DF I +GLH S ++ +F++++D L++ I C F D+++L+ +++ V
Sbjct: 331 D-GTTEDFPITIGLHQGSTLTPYLFTLVLDVLTEHIQELAPRCMLFADDVVLVGESREEV 389
Query: 638 NAKLVLWIQALET*CFRIV*LKIEYGKHN 552
N +L W QALE FR+ K +Y + N
Sbjct: 390 NGRLETWRQALEAYGFRLSRSKTKYMECN 418
Score = 25.8 bits (55), Expect(2) = 2e-07
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1
Query: 1035 FGYKLARLTIEAIYLL 988
FG+ L R T+EAIYLL
Sbjct: 251 FGFMLGRSTMEAIYLL 266
>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 882
Score = 63.5 bits (153), Expect = 2e-07
Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 12/144 (8%)
Frame = -2
Query: 959 KTLHIIVIDLEKA**GT*DYNTVN-------FEEKKATNRYTRLDE*YLK*SDTDIYRKN 801
K LH++ IDLEKA Y+ + E+ K +Y L + T + +
Sbjct: 164 KDLHMVFIDLEKA------YDKIPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTSD 217
Query: 800 IGVNGDFSIIVGLHSRSVVSLCVFSVIMDELSKCIIS----CWFF-DNIILIDKTKNRVN 636
+ + DF I +GLH S +S +F+++MDE+++ I C F D+++L+D ++ VN
Sbjct: 218 VDTD-DFPIKIGLHQGSALSPYLFALVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVN 276
Query: 635 AKLVLWIQALET*CFRIV*LKIEY 564
KL LW Q LE+ FR+ K EY
Sbjct: 277 RKLELWRQTLESKGFRLSRTKTEY 300
>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
jockey-like [Brachypodium distachyon]
Length = 307
Score = 62.4 bits (150), Expect = 4e-07
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Frame = -2
Query: 797 GVNGDFSIIVGLHSRSVVSLCVFSVIMDELSKCIIS----CWFF-DNIILIDKTKNRVNA 633
G DF I +GLH S +S C+F ++MDE+++ I C F D+++L+D ++ VN
Sbjct: 8 GDTDDFPIKIGLHQGSALSPCLFDLVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNR 67
Query: 632 KLVLWIQALET*CFRIV*LKIEYGK 558
KL LW Q LE+ FR+ K EY K
Sbjct: 68 KLELWRQTLESKGFRLSRTKTEYMK 92
>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
domestica]
Length = 622
Score = 58.5 bits (140), Expect(2) = 6e-07
Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 12/134 (8%)
Frame = -2
Query: 965 GEKTLHIIVIDLEKA**GT*DYNTVN-------FEEKKATNRYTRLDE*YLK*SDTDIYR 807
G+K LH++ IDLEKA Y+ V+ E+K Y + + + + T + R
Sbjct: 298 GKKDLHMVFIDLEKA------YDRVSRDIIWRILEKKGVRVAYIQAIKDMYEGAKTAV-R 350
Query: 806 KNIGVNGDFSIIVGLHSRSVVSLCVFSVIMDELSKCIIS----CWFFD-NIILIDKTKNR 642
G F I VGLH S +S +F+++MDEL+ I C F +I+LID+T+
Sbjct: 351 TYEGQTESFPITVGLHQGSSLSPYLFALVMDELTGHIQDDIPWCMLFAYDIVLIDETQEG 410
Query: 641 VNAKLVLWIQALET 600
VNAKL LW + LE+
Sbjct: 411 VNAKLNLWREVLES 424
Score = 23.1 bits (48), Expect(2) = 6e-07
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 1035 FGYKLARLTIEAIYLL 988
FG+ R T+EAIYLL
Sbjct: 273 FGFMPGRSTMEAIYLL 288
>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
Length = 377
Score = 58.9 bits (141), Expect = 5e-06
Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 12/145 (8%)
Frame = -2
Query: 962 EKTLHIIVIDLEKA**GT*DYNTVNFE------EKKATN-RYTRLDE*YLK*SDTDIYRK 804
++ LH+I IDLEKA Y+ V E EKK Y R + T + R
Sbjct: 24 QQDLHLIFIDLEKA------YDRVPREILWKALEKKGVRVAYIRAIQDMYDRVSTSV-RT 76
Query: 803 NIGVNGDFSIIVGLHSRSVVSLCVFSVIMDELSKCIIS----CWFF-DNIILIDKTKNRV 639
G + DF I +GLH S +S +F++I+D L++ I C F D+I+L+ +++ +
Sbjct: 77 QGGESDDFPITIGLHQGSTLSPYLFTLILDVLTEQIQEIAPRCMLFADDIVLLGESREEL 136
Query: 638 NAKLVLWIQALET*CFRIV*LKIEY 564
N +L W +ALET FR+ K EY
Sbjct: 137 NERLETWRRALETHGFRLSRSKSEY 161