BLASTX nr result

ID: Sinomenium21_contig00026751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00026751
         (266 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis v...    57   2e-06
emb|CBI15756.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002511091.1| RNA-binding protein, putative [Ricinus commu...    57   3e-06
ref|XP_007210388.1| hypothetical protein PRUPE_ppa000997mg [Prun...    57   4e-06
ref|XP_006376926.1| hypothetical protein POPTR_0012s10900g [Popu...    56   5e-06
ref|XP_002321750.2| RNA recognition motif-containing family prot...    56   5e-06
ref|XP_002297875.2| hypothetical protein POPTR_0001s13030g [Popu...    55   8e-06
ref|XP_002304641.2| RNA recognition motif-containing family prot...    55   8e-06

>ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera]
          Length = 991

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/48 (60%), Positives = 38/48 (79%), Gaps = 2/48 (4%)
 Frame = -3

Query: 264  NAGDQEPFPMGVNIQTRPSKPRSNGSEEN-HESSPSTS-NEVESLSGS 127
            NAGDQEPFPMG NI++RP K R++G EE+ H+ SP+TS N  ES +G+
Sbjct: 933  NAGDQEPFPMGSNIRSRPGKARTSGGEESQHQGSPTTSANGEESSNGA 980


>emb|CBI15756.3| unnamed protein product [Vitis vinifera]
          Length = 998

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/48 (60%), Positives = 38/48 (79%), Gaps = 2/48 (4%)
 Frame = -3

Query: 264  NAGDQEPFPMGVNIQTRPSKPRSNGSEEN-HESSPSTS-NEVESLSGS 127
            NAGDQEPFPMG NI++RP K R++G EE+ H+ SP+TS N  ES +G+
Sbjct: 940  NAGDQEPFPMGSNIRSRPGKARTSGGEESQHQGSPTTSANGEESSNGA 987


>ref|XP_002511091.1| RNA-binding protein, putative [Ricinus communis]
            gi|223550206|gb|EEF51693.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 972

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = -3

Query: 264  NAGDQEPFPMGVNIQTRPSKPRSNGSEENHESSPSTSNEVESLS 133
            NAGD EPFPMG N+++R  K R++GSEENH  +PSTS   E  S
Sbjct: 920  NAGDPEPFPMGTNVRSRLGKLRTSGSEENHHGNPSTSANGEDSS 963


>ref|XP_007210388.1| hypothetical protein PRUPE_ppa000997mg [Prunus persica]
            gi|462406123|gb|EMJ11587.1| hypothetical protein
            PRUPE_ppa000997mg [Prunus persica]
          Length = 936

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 26/43 (60%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
 Frame = -3

Query: 264  NAGDQEPFPMGVNIQTRPSKPRSNGSEENH-ESSPSTSNEVES 139
            NAGD EPFPMG NI++RP KPR+ G E+NH + SPS + E  S
Sbjct: 878  NAGDPEPFPMGTNIRSRPGKPRTAGYEDNHNQGSPSANGEESS 920


>ref|XP_006376926.1| hypothetical protein POPTR_0012s10900g [Populus trichocarpa]
            gi|550326839|gb|ERP54723.1| hypothetical protein
            POPTR_0012s10900g [Populus trichocarpa]
          Length = 960

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/47 (61%), Positives = 37/47 (78%), Gaps = 2/47 (4%)
 Frame = -3

Query: 264  NAGDQEPFPMGVNIQTRPSKPRSNGSEENHES-SPST-SNEVESLSG 130
            NAGD EPFPMG +I++R  KP+S G+EENH S SPST +NE +S +G
Sbjct: 890  NAGDPEPFPMGTHIRSRLGKPQSTGNEENHHSRSPSTLANEEDSPNG 936


>ref|XP_002321750.2| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|550322511|gb|EEF05877.2| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 930

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 31/54 (57%), Positives = 37/54 (68%), Gaps = 8/54 (14%)
 Frame = -3

Query: 264  NAGDQEPFPMGVNIQTRPSKPRSNGSEENHES-SPST-------SNEVESLSGS 127
            NAGD EPFPMG +I++R  KPRS+G+EENH S SPST        N + S SGS
Sbjct: 876  NAGDPEPFPMGTHIRSRLGKPRSSGNEENHHSGSPSTLANGEDSPNGIHSPSGS 929


>ref|XP_002297875.2| hypothetical protein POPTR_0001s13030g [Populus trichocarpa]
            gi|550347136|gb|EEE82680.2| hypothetical protein
            POPTR_0001s13030g [Populus trichocarpa]
          Length = 976

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/35 (68%), Positives = 28/35 (80%)
 Frame = -3

Query: 264  NAGDQEPFPMGVNIQTRPSKPRSNGSEENHESSPS 160
            NAGDQ PFPMGVN++TRP KPR+   EEN + SPS
Sbjct: 920  NAGDQVPFPMGVNVRTRPGKPRTITHEENQQGSPS 954


>ref|XP_002304641.2| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|550343287|gb|EEE79620.2| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 976

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/35 (68%), Positives = 28/35 (80%)
 Frame = -3

Query: 264  NAGDQEPFPMGVNIQTRPSKPRSNGSEENHESSPS 160
            NAGDQ PFPMGVN++TRP KPR+   EEN + SPS
Sbjct: 920  NAGDQVPFPMGVNVRTRPGKPRTITHEENQQGSPS 954


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