BLASTX nr result
ID: Sinomenium21_contig00026527
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00026527
(217 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266642.1| PREDICTED: ATP-dependent RNA helicase dhx8-l... 86 4e-15
emb|CBI27579.3| unnamed protein product [Vitis vinifera] 86 4e-15
emb|CAN63193.1| hypothetical protein VITISV_017130 [Vitis vinifera] 86 4e-15
gb|EYU42108.1| hypothetical protein MIMGU_mgv1a023664mg [Mimulus... 80 3e-13
ref|XP_004310054.1| PREDICTED: ATP-dependent RNA helicase DHX8-l... 80 3e-13
ref|XP_006484063.1| PREDICTED: probable pre-mRNA-splicing factor... 80 4e-13
ref|XP_006438088.1| hypothetical protein CICLE_v10030845mg [Citr... 80 4e-13
ref|XP_006438087.1| hypothetical protein CICLE_v10030845mg [Citr... 80 4e-13
ref|XP_006438086.1| hypothetical protein CICLE_v10030845mg [Citr... 80 4e-13
ref|XP_006361550.1| PREDICTED: ATP-dependent RNA helicase DHX8-l... 77 2e-12
ref|XP_004239197.1| PREDICTED: ATP-dependent RNA helicase dhx8-l... 77 2e-12
ref|XP_003637319.1| ATP-dependent RNA helicase dhx8 [Medicago tr... 77 2e-12
ref|XP_002314547.1| RNA helicase family protein [Populus trichoc... 77 3e-12
gb|EXB94988.1| putative pre-mRNA-splicing factor ATP-dependent R... 76 4e-12
ref|XP_007222725.1| hypothetical protein PRUPE_ppa006475mg [Prun... 76 4e-12
ref|XP_006580114.1| PREDICTED: ATP-dependent RNA helicase dhx8-l... 75 9e-12
ref|XP_007045028.1| RNA helicase family protein isoform 4 [Theob... 75 9e-12
ref|XP_007045027.1| RNA helicase family protein isoform 3 [Theob... 75 9e-12
ref|XP_007045025.1| RNA helicase family protein isoform 1 [Theob... 75 9e-12
ref|XP_003524885.1| PREDICTED: ATP-dependent RNA helicase dhx8-l... 75 9e-12
>ref|XP_002266642.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Vitis vinifera]
Length = 700
Score = 86.3 bits (212), Expect = 4e-15
Identities = 35/50 (70%), Positives = 40/50 (80%)
Frame = +1
Query: 67 SKGTERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
SK TE+KRKH P DLPDGSG GDH+QLLQ++E W Q DY+ WC DHGLQ
Sbjct: 466 SKSTEKKRKHTPTDLPDGSGWGDHIQLLQIFEQWDQTDYDPNWCKDHGLQ 515
>emb|CBI27579.3| unnamed protein product [Vitis vinifera]
Length = 704
Score = 86.3 bits (212), Expect = 4e-15
Identities = 35/50 (70%), Positives = 40/50 (80%)
Frame = +1
Query: 67 SKGTERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
SK TE+KRKH P DLPDGSG GDH+QLLQ++E W Q DY+ WC DHGLQ
Sbjct: 470 SKSTEKKRKHTPTDLPDGSGWGDHIQLLQIFEQWDQTDYDPNWCKDHGLQ 519
>emb|CAN63193.1| hypothetical protein VITISV_017130 [Vitis vinifera]
Length = 2336
Score = 86.3 bits (212), Expect = 4e-15
Identities = 35/50 (70%), Positives = 40/50 (80%)
Frame = +1
Query: 67 SKGTERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
SK TE+KRKH P DLPDGSG GDH+QLLQ++E W Q DY+ WC DHGLQ
Sbjct: 464 SKSTEKKRKHTPTDLPDGSGWGDHIQLLQIFEQWDQTDYDPNWCKDHGLQ 513
>gb|EYU42108.1| hypothetical protein MIMGU_mgv1a023664mg [Mimulus guttatus]
Length = 654
Score = 80.1 bits (196), Expect = 3e-13
Identities = 33/50 (66%), Positives = 40/50 (80%)
Frame = +1
Query: 67 SKGTERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
SK TE+KRKH P +LPDGSGLGDH+QLLQ+YE+W Q YN WC ++ LQ
Sbjct: 466 SKNTEKKRKHPPSNLPDGSGLGDHIQLLQIYEHWHQTGYNIDWCKENNLQ 515
>ref|XP_004310054.1| PREDICTED: ATP-dependent RNA helicase DHX8-like [Fragaria vesca
subsp. vesca]
Length = 698
Score = 80.1 bits (196), Expect = 3e-13
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = +1
Query: 67 SKGTERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
SK TE+KRKH LDLPDGSG GDH+QLLQ+YE W Q YN WC D GLQ
Sbjct: 466 SKSTEKKRKHDHLDLPDGSGWGDHIQLLQIYECWHQTHYNIDWCKDRGLQ 515
>ref|XP_006484063.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform X1 [Citrus sinensis]
Length = 704
Score = 79.7 bits (195), Expect = 4e-13
Identities = 33/50 (66%), Positives = 40/50 (80%)
Frame = +1
Query: 67 SKGTERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
SK TE+KRKH PL+LPDGSG GDH+QLLQ+YE W + DY+ W D+GLQ
Sbjct: 466 SKSTEKKRKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQ 515
>ref|XP_006438088.1| hypothetical protein CICLE_v10030845mg [Citrus clementina]
gi|557540284|gb|ESR51328.1| hypothetical protein
CICLE_v10030845mg [Citrus clementina]
Length = 524
Score = 79.7 bits (195), Expect = 4e-13
Identities = 33/50 (66%), Positives = 40/50 (80%)
Frame = +1
Query: 67 SKGTERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
SK TE+KRKH PL+LPDGSG GDH+QLLQ+YE W + DY+ W D+GLQ
Sbjct: 466 SKSTEKKRKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQ 515
>ref|XP_006438087.1| hypothetical protein CICLE_v10030845mg [Citrus clementina]
gi|557540283|gb|ESR51327.1| hypothetical protein
CICLE_v10030845mg [Citrus clementina]
Length = 550
Score = 79.7 bits (195), Expect = 4e-13
Identities = 33/50 (66%), Positives = 40/50 (80%)
Frame = +1
Query: 67 SKGTERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
SK TE+KRKH PL+LPDGSG GDH+QLLQ+YE W + DY+ W D+GLQ
Sbjct: 466 SKSTEKKRKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQ 515
>ref|XP_006438086.1| hypothetical protein CICLE_v10030845mg [Citrus clementina]
gi|567891137|ref|XP_006438089.1| hypothetical protein
CICLE_v10030845mg [Citrus clementina]
gi|557540282|gb|ESR51326.1| hypothetical protein
CICLE_v10030845mg [Citrus clementina]
gi|557540285|gb|ESR51329.1| hypothetical protein
CICLE_v10030845mg [Citrus clementina]
Length = 704
Score = 79.7 bits (195), Expect = 4e-13
Identities = 33/50 (66%), Positives = 40/50 (80%)
Frame = +1
Query: 67 SKGTERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
SK TE+KRKH PL+LPDGSG GDH+QLLQ+YE W + DY+ W D+GLQ
Sbjct: 466 SKSTEKKRKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQ 515
>ref|XP_006361550.1| PREDICTED: ATP-dependent RNA helicase DHX8-like isoform X1 [Solanum
tuberosum]
Length = 700
Score = 77.4 bits (189), Expect = 2e-12
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +1
Query: 67 SKGTERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
SK +E+KR+H P +LPDG GLGDH+QLLQ+YE W Q DYN WC ++ LQ
Sbjct: 466 SKSSEKKRRHTPSNLPDGFGLGDHIQLLQIYEQWYQTDYNIDWCKENNLQ 515
>ref|XP_004239197.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Solanum
lycopersicum]
Length = 700
Score = 77.4 bits (189), Expect = 2e-12
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +1
Query: 67 SKGTERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
SK +E+KR+H P +LPDG GLGDH+QLLQ+YE W Q DYN WC ++ LQ
Sbjct: 466 SKSSEKKRRHTPSNLPDGFGLGDHIQLLQIYEQWYQTDYNIDWCKENNLQ 515
>ref|XP_003637319.1| ATP-dependent RNA helicase dhx8 [Medicago truncatula]
gi|355503254|gb|AES84457.1| ATP-dependent RNA helicase
dhx8 [Medicago truncatula]
Length = 375
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = +1
Query: 64 CSKGTERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
CSK TE+KRK +LPDGSGLGDH+QLLQ++E W Q DY+ WC DHGLQ
Sbjct: 2 CSK-TEKKRKRPISNLPDGSGLGDHIQLLQIFERWHQTDYDIGWCKDHGLQ 51
>ref|XP_002314547.1| RNA helicase family protein [Populus trichocarpa]
gi|222863587|gb|EEF00718.1| RNA helicase family protein
[Populus trichocarpa]
Length = 699
Score = 76.6 bits (187), Expect = 3e-12
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +1
Query: 67 SKGTERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
SK E+KRKH P DLPDGSG GDHVQLLQ++E W Q +++ WC D GLQ
Sbjct: 476 SKSNEKKRKHPPPDLPDGSGYGDHVQLLQIFEQWDQNEFDIGWCKDKGLQ 525
>gb|EXB94988.1| putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Morus
notabilis]
Length = 657
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +1
Query: 67 SKGTERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
SK TE+KRK LDLPDGSG GDH+QLLQ+YE W Q DYN WC +GLQ
Sbjct: 427 SKDTEKKRKQNNLDLPDGSGWGDHIQLLQIYECWHQTDYNIDWCKVNGLQ 476
>ref|XP_007222725.1| hypothetical protein PRUPE_ppa006475mg [Prunus persica]
gi|462419661|gb|EMJ23924.1| hypothetical protein
PRUPE_ppa006475mg [Prunus persica]
Length = 410
Score = 76.3 bits (186), Expect = 4e-12
Identities = 33/50 (66%), Positives = 39/50 (78%)
Frame = +1
Query: 67 SKGTERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
SK TE+KRKH LDLPDGSG GDH+QLLQ+YE W Q +Y+ WC D+ LQ
Sbjct: 176 SKNTEKKRKHDYLDLPDGSGWGDHIQLLQIYECWHQTNYDIDWCKDYQLQ 225
>ref|XP_006580114.1| PREDICTED: ATP-dependent RNA helicase dhx8-like isoform X2 [Glycine
max]
Length = 697
Score = 75.1 bits (183), Expect = 9e-12
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +1
Query: 76 TERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
TE+KRKH +LPDGSGLGDH+QLLQ+YE W Q D++ WC D+GLQ
Sbjct: 465 TEKKRKHTISNLPDGSGLGDHIQLLQIYECWDQTDFDIGWCKDNGLQ 511
>ref|XP_007045028.1| RNA helicase family protein isoform 4 [Theobroma cacao]
gi|508708963|gb|EOY00860.1| RNA helicase family protein
isoform 4 [Theobroma cacao]
Length = 650
Score = 75.1 bits (183), Expect = 9e-12
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = +1
Query: 67 SKGTERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
SK E+KRKH PLDLPDGSG GDH+QLLQ++E W + DY+ WC + LQ
Sbjct: 466 SKSNEKKRKHPPLDLPDGSGFGDHIQLLQIFECWDENDYDIGWCKYYDLQ 515
>ref|XP_007045027.1| RNA helicase family protein isoform 3 [Theobroma cacao]
gi|508708962|gb|EOY00859.1| RNA helicase family protein
isoform 3 [Theobroma cacao]
Length = 692
Score = 75.1 bits (183), Expect = 9e-12
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = +1
Query: 67 SKGTERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
SK E+KRKH PLDLPDGSG GDH+QLLQ++E W + DY+ WC + LQ
Sbjct: 466 SKSNEKKRKHPPLDLPDGSGFGDHIQLLQIFECWDENDYDIGWCKYYDLQ 515
>ref|XP_007045025.1| RNA helicase family protein isoform 1 [Theobroma cacao]
gi|590695923|ref|XP_007045026.1| RNA helicase family
protein isoform 1 [Theobroma cacao]
gi|508708960|gb|EOY00857.1| RNA helicase family protein
isoform 1 [Theobroma cacao] gi|508708961|gb|EOY00858.1|
RNA helicase family protein isoform 1 [Theobroma cacao]
Length = 700
Score = 75.1 bits (183), Expect = 9e-12
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = +1
Query: 67 SKGTERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
SK E+KRKH PLDLPDGSG GDH+QLLQ++E W + DY+ WC + LQ
Sbjct: 466 SKSNEKKRKHPPLDLPDGSGFGDHIQLLQIFECWDENDYDIGWCKYYDLQ 515
>ref|XP_003524885.1| PREDICTED: ATP-dependent RNA helicase dhx8-like isoform X1 [Glycine
max]
Length = 696
Score = 75.1 bits (183), Expect = 9e-12
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +1
Query: 76 TERKRKHAPLDLPDGSGLGDHVQLLQVYENWGQADYNTCWCMDHGLQ 216
TE+KRKH +LPDGSGLGDH+QLLQ+YE W Q D++ WC D+GLQ
Sbjct: 465 TEKKRKHTISNLPDGSGLGDHIQLLQIYECWDQTDFDIGWCKDNGLQ 511