BLASTX nr result
ID: Sinomenium21_contig00026444
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00026444
(272 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containi... 126 4e-27
emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera] 125 8e-27
ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containi... 104 1e-20
gb|EXB44694.1| hypothetical protein L484_015951 [Morus notabilis] 103 3e-20
ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfam... 103 3e-20
ref|XP_007029385.1| Tetratricopeptide-like helical, putative iso... 103 3e-20
ref|XP_004508732.1| PREDICTED: pentatricopeptide repeat-containi... 102 4e-20
ref|XP_007046822.1| Pentatricopeptide repeat (PPR) superfamily p... 102 6e-20
ref|XP_007139730.1| hypothetical protein PHAVU_008G054600g [Phas... 100 3e-19
ref|XP_002305798.2| pentatricopeptide repeat-containing family p... 100 3e-19
ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pen... 100 3e-19
emb|CBI39620.3| unnamed protein product [Vitis vinifera] 100 3e-19
emb|CBI17644.3| unnamed protein product [Vitis vinifera] 100 3e-19
ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat... 100 3e-19
emb|CAN82639.1| hypothetical protein VITISV_028820 [Vitis vinifera] 100 3e-19
ref|XP_002515531.1| pentatricopeptide repeat-containing protein,... 100 4e-19
gb|ABK26521.1| unknown [Picea sitchensis] 100 4e-19
gb|EXB53013.1| hypothetical protein L484_018897 [Morus notabilis] 99 6e-19
ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containi... 99 6e-19
ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containi... 99 6e-19
>ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 126 bits (316), Expect = 4e-27
Identities = 60/90 (66%), Positives = 75/90 (83%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
IDM+ KCGS+ A+ VF GAK+K+VGEWTAM+SG+A GLG +LIE FE MV SG+KPN
Sbjct: 263 IDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAMHGLGEQLIEAFEKMVDSGVKPNG 322
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERMKSEF 3
VTFV LLSG +H+GLV+EGL YF+RM+S+F
Sbjct: 323 VTFVALLSGCSHSGLVNEGLYYFDRMESDF 352
>emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 125 bits (313), Expect = 8e-27
Identities = 60/90 (66%), Positives = 75/90 (83%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
IDM+ KCGS+ A+ VF GAK+K+VGEWTAM+SG+A GLG +LIE FE MV SGIKP+
Sbjct: 262 IDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAMHGLGEQLIEAFEKMVDSGIKPDE 321
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERMKSEF 3
VTFV LLSG +H+GLV+EGL YF+RM+S+F
Sbjct: 322 VTFVALLSGCSHSGLVNEGLYYFDRMESDF 351
>ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18970
[Vitis vinifera] gi|298204853|emb|CBI34160.3| unnamed
protein product [Vitis vinifera]
Length = 471
Score = 104 bits (259), Expect = 1e-20
Identities = 48/90 (53%), Positives = 63/90 (70%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
+DMYSKCG + A+ +F G K++NV WTAMI+G+A G G +EL ++MV G+KPN
Sbjct: 258 VDMYSKCGCLGSALCIFWGMKERNVLTWTAMITGLARHGRGKEALELLDEMVAYGVKPNA 317
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERMKSEF 3
VTF L S HAGLV+EGLQ F M+S+F
Sbjct: 318 VTFTSLFSACCHAGLVEEGLQLFHSMRSKF 347
>gb|EXB44694.1| hypothetical protein L484_015951 [Morus notabilis]
Length = 640
Score = 103 bits (256), Expect = 3e-20
Identities = 46/90 (51%), Positives = 63/90 (70%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
+ MYS+CGS++ A +VF G +DKNV W+AMISG+A G G I FE+M ++G+KP+
Sbjct: 310 VSMYSRCGSLDKAYEVFRGLQDKNVVSWSAMISGLAINGYGREAINAFEEMQKTGVKPDA 369
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERMKSEF 3
TF G+LS +H GLVDEG+ +F RM F
Sbjct: 370 QTFTGILSACSHCGLVDEGMMFFGRMSKGF 399
>ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao] gi|508783730|gb|EOY30986.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative [Theobroma cacao]
Length = 847
Score = 103 bits (256), Expect = 3e-20
Identities = 48/90 (53%), Positives = 62/90 (68%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
IDMY+KCGS+ A VF G + KN+ W AMISG+A GL + +ELF M+ G+KP+
Sbjct: 464 IDMYAKCGSIEAAQQVFNGMEQKNLASWNAMISGLAMHGLADKALELFSQMMGGGLKPDD 523
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERMKSEF 3
+TFVG+LS THAGL+D G QYF M E+
Sbjct: 524 ITFVGVLSACTHAGLLDLGRQYFSSMVQEY 553
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/79 (39%), Positives = 45/79 (56%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
IDMYSKCG ++ A D+F G + ++V W MI G + LF M+RS I+P+
Sbjct: 362 IDMYSKCGDLDTAFDLFEGLQQRDVISWNVMIGGYTHMSYYKEALGLFRRMLRSNIEPSD 421
Query: 92 VTFVGLLSGSTHAGLVDEG 36
VTF+ +L + G +D G
Sbjct: 422 VTFLSVLPACANLGALDLG 440
>ref|XP_007029385.1| Tetratricopeptide-like helical, putative isoform 1 [Theobroma
cacao] gi|590638415|ref|XP_007029386.1|
Tetratricopeptide-like helical, putative isoform 1
[Theobroma cacao] gi|508717990|gb|EOY09887.1|
Tetratricopeptide-like helical, putative isoform 1
[Theobroma cacao] gi|508717991|gb|EOY09888.1|
Tetratricopeptide-like helical, putative isoform 1
[Theobroma cacao]
Length = 752
Score = 103 bits (256), Expect = 3e-20
Identities = 50/90 (55%), Positives = 63/90 (70%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
IDMYSKCGS++DA VF DKNV WT+MIS A G G + LFE M+ GIKPNV
Sbjct: 422 IDMYSKCGSLDDAQMVFKQTNDKNVVLWTSMISCCALHGQGREAVRLFEFMMSEGIKPNV 481
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERMKSEF 3
VTF+G+L+ +HAGL++EG +YF MK +
Sbjct: 482 VTFIGVLTACSHAGLIEEGCRYFRLMKEVY 511
>ref|XP_004508732.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cicer arietinum]
Length = 633
Score = 102 bits (255), Expect = 4e-20
Identities = 47/90 (52%), Positives = 67/90 (74%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
I MYS+CG ++ A +VF+G ++K V W+AMISG+A G G IE FE+M R+GI+P+
Sbjct: 303 ISMYSRCGCLDKAYEVFMGMENKTVISWSAMISGLAVNGYGREAIEAFEEMQRNGIRPDD 362
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERMKSEF 3
TF G+LSG +H+ L+DEG+ +F+RM SEF
Sbjct: 363 HTFTGILSGCSHSRLLDEGMSFFDRMISEF 392
>ref|XP_007046822.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508699083|gb|EOX90979.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 658
Score = 102 bits (254), Expect = 6e-20
Identities = 46/90 (51%), Positives = 66/90 (73%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
IDMYSKCGSV DA VF +++NV +++MI+G A G Y +ELF +MV++GIKPN
Sbjct: 327 IDMYSKCGSVEDAYKVFEAMEERNVFSYSSMIAGFAMHGCAYAALELFREMVKTGIKPNR 386
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERMKSEF 3
VTF+G+L+ +H+G+V++G Q F M+ EF
Sbjct: 387 VTFIGVLTACSHSGMVEQGRQIFASMEEEF 416
>ref|XP_007139730.1| hypothetical protein PHAVU_008G054600g [Phaseolus vulgaris]
gi|561012863|gb|ESW11724.1| hypothetical protein
PHAVU_008G054600g [Phaseolus vulgaris]
Length = 755
Score = 100 bits (248), Expect = 3e-19
Identities = 48/90 (53%), Positives = 63/90 (70%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
IDMYSKCGS++DA +F NV WT+MISG + QG G + I LFE+M+ GI PN
Sbjct: 425 IDMYSKCGSLDDAWMIFRQVNKPNVILWTSMISGCSLQGQGRQAISLFEEMLNQGIMPNE 484
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERMKSEF 3
VTF+G+L+ +HAGL+DEG +YF MK +
Sbjct: 485 VTFLGVLNACSHAGLLDEGCRYFRMMKDAY 514
>ref|XP_002305798.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550340302|gb|EEE86309.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 591
Score = 100 bits (248), Expect = 3e-19
Identities = 46/90 (51%), Positives = 65/90 (72%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
I+MY++CG+V+ A +VF K++NV WTAMISG T G G + +ELF +M R+G+ PN
Sbjct: 254 INMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNS 313
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERMKSEF 3
+TFV +LS HAGLV+EG + FE M+ E+
Sbjct: 314 ITFVAVLSACAHAGLVNEGRRVFESMREEY 343
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/74 (39%), Positives = 40/74 (54%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
+ Y KCG + +A VF +D++V W +MISG G I LF+ M G++PN
Sbjct: 153 MSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNS 212
Query: 92 VTFVGLLSGSTHAG 51
TFV +LS H G
Sbjct: 213 ATFVSVLSACAHLG 226
>ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 100 bits (248), Expect = 3e-19
Identities = 48/90 (53%), Positives = 63/90 (70%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
IDMY KCGS+NDA +F AKD+NV WT+MISG A G G + LFE M+ GI PN
Sbjct: 678 IDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNE 737
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERMKSEF 3
V+FVG+L+ +HAGL++EG +YF M+ +
Sbjct: 738 VSFVGVLTACSHAGLLEEGCKYFRLMREVY 767
>emb|CBI39620.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 100 bits (248), Expect = 3e-19
Identities = 46/90 (51%), Positives = 64/90 (71%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
IDMYSKCG++ D+ VF G +++ WTAM+ G T G G +ELF+ MVRSGI+P+
Sbjct: 337 IDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDR 396
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERMKSEF 3
V F+ +LS +HAGLVDEGL+YF+ M ++
Sbjct: 397 VVFMAILSACSHAGLVDEGLRYFKLMVGDY 426
>emb|CBI17644.3| unnamed protein product [Vitis vinifera]
Length = 628
Score = 100 bits (248), Expect = 3e-19
Identities = 48/90 (53%), Positives = 63/90 (70%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
IDMY KCGS+NDA +F AKD+NV WT+MISG A G G + LFE M+ GI PN
Sbjct: 375 IDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNE 434
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERMKSEF 3
V+FVG+L+ +HAGL++EG +YF M+ +
Sbjct: 435 VSFVGVLTACSHAGLLEEGCKYFRLMREVY 464
>ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 100 bits (248), Expect = 3e-19
Identities = 46/90 (51%), Positives = 64/90 (71%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
IDMYSKCG++ D+ VF G +++ WTAM+ G T G G +ELF+ MVRSGI+P+
Sbjct: 353 IDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDR 412
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERMKSEF 3
V F+ +LS +HAGLVDEGL+YF+ M ++
Sbjct: 413 VVFMAILSACSHAGLVDEGLRYFKLMVGDY 442
>emb|CAN82639.1| hypothetical protein VITISV_028820 [Vitis vinifera]
Length = 871
Score = 100 bits (248), Expect = 3e-19
Identities = 48/90 (53%), Positives = 63/90 (70%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
IDMY KCGS+NDA +F AKD+NV WT+MISG A G G + LFE M+ GI PN
Sbjct: 388 IDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNE 447
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERMKSEF 3
V+FVG+L+ +HAGL++EG +YF M+ +
Sbjct: 448 VSFVGVLTACSHAGLLEEGCKYFRLMREVY 477
>ref|XP_002515531.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545475|gb|EEF46980.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 397
Score = 99.8 bits (247), Expect = 4e-19
Identities = 41/90 (45%), Positives = 65/90 (72%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
IDM++KCG V+ A+ +F KD+ + WT++I+G+A G G +E FE+M++SG+ P+
Sbjct: 281 IDMFAKCGDVDKAIKLFRNMKDRTIVSWTSVIAGLAMHGRGLEAVEFFEEMIKSGVLPDD 340
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERMKSEF 3
V F+GLLS +H+GLVD+G +YF+ M+ F
Sbjct: 341 VAFIGLLSACSHSGLVDKGREYFDLMRENF 370
>gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 99.8 bits (247), Expect = 4e-19
Identities = 45/86 (52%), Positives = 60/86 (69%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
+DMY KCG + DA +VF + +V W AMISG+A G G + LFE M+++G+KPN
Sbjct: 40 VDMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQ 99
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERM 15
+TFV +LSG +HAGLVDEG YF+ M
Sbjct: 100 ITFVVVLSGCSHAGLVDEGRNYFDSM 125
>gb|EXB53013.1| hypothetical protein L484_018897 [Morus notabilis]
Length = 582
Score = 99.0 bits (245), Expect = 6e-19
Identities = 44/90 (48%), Positives = 63/90 (70%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
IDMY+KCG++ D+ VF DKN+ WT+M+ G G G +ELF++MVR GI+P+
Sbjct: 328 IDMYAKCGNIADSHKVFNEMSDKNLVSWTSMMIGYGAHGFGKEAVELFDEMVRLGIRPDQ 387
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERMKSEF 3
+ F+ +LS +HAGLVDEGL+YF+ M S +
Sbjct: 388 IVFMAVLSACSHAGLVDEGLKYFQSMMSTY 417
>ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Solanum tuberosum]
Length = 849
Score = 99.0 bits (245), Expect = 6e-19
Identities = 43/86 (50%), Positives = 60/86 (69%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
I MYS+CG++ A VF G +D+NV WT++I+G A G +R +ELF M+ GIKPN
Sbjct: 519 ISMYSRCGNIEAAFQVFEGMEDRNVISWTSIITGFAKHGFAHRAVELFNQMLEDGIKPNE 578
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERM 15
VT++ +LS +H GLVDEG +YF+ M
Sbjct: 579 VTYIAVLSACSHVGLVDEGWKYFDSM 604
>ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Solanum lycopersicum]
Length = 844
Score = 99.0 bits (245), Expect = 6e-19
Identities = 43/86 (50%), Positives = 60/86 (69%)
Frame = -1
Query: 272 IDMYSKCGSVNDAVDVFVGAKDKNVGEWTAMISGMATQGLGYRLIELFEDMVRSGIKPNV 93
I MYS+CG++ A VF G +D+NV WT++I+G A G +R +ELF M+ GIKPN
Sbjct: 514 ISMYSRCGNIEAAFQVFEGMEDRNVISWTSIITGFAKHGFAHRAVELFNQMLEDGIKPNE 573
Query: 92 VTFVGLLSGSTHAGLVDEGLQYFERM 15
VT++ +LS +H GLVDEG +YF+ M
Sbjct: 574 VTYIAVLSACSHVGLVDEGWKYFDSM 599