BLASTX nr result

ID: Sinomenium21_contig00026202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00026202
         (407 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65986.1| hypothetical protein VITISV_042143 [Vitis vinifera]    59   3e-17
ref|XP_002534720.1| conserved hypothetical protein [Ricinus comm...    92   6e-17
ref|XP_003588351.1| Maturase [Medicago truncatula] gi|355477399|...    76   4e-12

>emb|CAN65986.1| hypothetical protein VITISV_042143 [Vitis vinifera]
          Length = 138

 Score = 59.3 bits (142), Expect(3) = 3e-17
 Identities = 31/50 (62%), Positives = 33/50 (66%)
 Frame = +2

Query: 2   KSNVHRPGE*GCSSVDRSSGLIGGGITPFSKEPYVTLSRHTAPSRNQDPP 151
           +SNVH PG               GGITPFSKEPYVTLSRHTAPSRN+D P
Sbjct: 13  ESNVHGPG---------------GGITPFSKEPYVTLSRHTAPSRNKDLP 47



 Score = 50.8 bits (120), Expect(3) = 3e-17
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = +1

Query: 196 PFHSFID*FKVALACFQVQALAVEASRQKRTSGPGR 303
           PF+S      VA+ACFQVQALAVEASRQK TSGPGR
Sbjct: 61  PFYS-----SVAVACFQVQALAVEASRQKLTSGPGR 91



 Score = 23.5 bits (49), Expect(3) = 3e-17
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +3

Query: 150 PFPLTNGSS 176
           PFPLTNGSS
Sbjct: 47  PFPLTNGSS 55


>ref|XP_002534720.1| conserved hypothetical protein [Ricinus communis]
           gi|223524693|gb|EEF27662.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 77

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 40/41 (97%), Positives = 40/41 (97%)
 Frame = +1

Query: 34  MQLRGPLVGPDRWWYHTLLKGTVRDTLASYGSVPESGPPPF 156
           MQLRGPLVGPDRWWYHTLLKGTVRDTLASYGS PESGPPPF
Sbjct: 1   MQLRGPLVGPDRWWYHTLLKGTVRDTLASYGSAPESGPPPF 41


>ref|XP_003588351.1| Maturase [Medicago truncatula] gi|355477399|gb|AES58602.1| Maturase
           [Medicago truncatula]
          Length = 996

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = -3

Query: 117 RESVTYGSFEKGVIPPPIRPDERSTELHPYSPGLCTLL 4
           RE++TYGSFEKGV PPPIRPDERSTELHPYSPG CTLL
Sbjct: 880 RENLTYGSFEKGVRPPPIRPDERSTELHPYSPGPCTLL 917


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