BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00026043
         (1081 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006402169.1| hypothetical protein EUTSA_v10015409mg, part...   133   1e-28
ref|XP_007052567.1| Gag-pol polyprotein, putative [Theobroma cac...   123   2e-25
ref|XP_006392773.1| hypothetical protein EUTSA_v10012229mg [Eutr...   122   3e-25
ref|XP_007029783.1| Uncharacterized protein TCM_025656 [Theobrom...   122   3e-25
ref|XP_007033335.1| Uncharacterized protein TCM_019516, partial ...   115   3e-23
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 115   4e-23
ref|XP_007009850.1| Uncharacterized protein TCM_043155 [Theobrom...   112   2e-22
ref|XP_007028192.1| Uncharacterized protein TCM_023754 [Theobrom...   112   2e-22
ref|XP_007210666.1| hypothetical protein PRUPE_ppa022462mg [Prun...   111   6e-22
ref|XP_006290417.1| hypothetical protein CARUB_v10019144mg, part...   108   3e-21
ref|XP_004161321.1| PREDICTED: uncharacterized protein LOC101223...   107   7e-21
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                 105   4e-20
ref|XP_007050047.1| Uncharacterized protein TCM_003699 [Theobrom...   102   4e-19
ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624...   101   5e-19
ref|XP_006299377.1| hypothetical protein CARUB_v10015536mg [Caps...   100   1e-18
gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]              99   2e-18
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]              99   3e-18
ref|XP_007049887.1| DNA/RNA polymerases superfamily protein [The...    97   9e-18
emb|CAN64780.1| hypothetical protein VITISV_043231 [Vitis vinifera]    97   9e-18
ref|XP_006607002.1| PREDICTED: uncharacterized protein LOC100788...    97   2e-17

>ref|XP_006402169.1| hypothetical protein EUTSA_v10015409mg, partial [Eutrema
           salsugineum] gi|557103259|gb|ESQ43622.1| hypothetical
           protein EUTSA_v10015409mg, partial [Eutrema salsugineum]
          Length = 367

 Score =  133 bits (334), Expect = 1e-28
 Identities = 65/133 (48%), Positives = 86/133 (64%), Gaps = 1/133 (0%)
 Frame = -3

Query: 407 LLQQLCLAPRQ-QDDWLRNQYLSVSCTISGKVCRLVIDSNNCVNVISEEAVPKLSI*IVK 231
           +L+ +CLAP   ++ WLR      +CTI GKVCR V+DS +C NVI+E+A  KL +    
Sbjct: 201 MLRHVCLAPVVLEEPWLRTNIFQSTCTIKGKVCRFVVDSGSCRNVIAEDAARKLGLKRED 260

Query: 230 HSKTYKFPWLKKGSEVIVSH*AIVSFSIRNKYKDGVLCDVVCMDACHLLLD*P*QYDKRV 51
           H   YK  WLK+G E+ + H  +VSFSI + YKD + CDV  MD  HLLL  P QYD+ V
Sbjct: 261 HPAPYKLTWLKQGVEIRIEHRCLVSFSIGSHYKDKIYCDVALMDVSHLLLGTPWQYDRSV 320

Query: 50  IHDGRANTNNFQF 12
           +HDGR N+ +F F
Sbjct: 321 MHDGRRNSYSFIF 333


>ref|XP_007052567.1| Gag-pol polyprotein, putative [Theobroma cacao]
           gi|508704828|gb|EOX96724.1| Gag-pol polyprotein,
           putative [Theobroma cacao]
          Length = 794

 Score =  123 bits (308), Expect = 2e-25
 Identities = 60/120 (50%), Positives = 75/120 (62%)
 Frame = -3

Query: 377 QQDDWLRNQYLSVSCTISGKVCRLVIDSNNCVNVISEEAVPKLSI*IVKHSKTYKFPWLK 198
           + + WLR+      CT  GKVC ++IDS +C NVI+   V KL +    H   YK  WL+
Sbjct: 369 EDESWLRHNIFHTRCTSQGKVCNVIIDSGSCENVIANYMVKKLKLQTEVHPHPYKLQWLR 428

Query: 197 KGSEVIVSH*AIVSFSIRNKYKDGVLCDVVCMDACHLLLD*P*QYDKRVIHDGRANTNNF 18
           KG+EV V+    V FSI NKY+D V CDV+ MDACHLLL  P QYD+R  HDG  NT +F
Sbjct: 429 KGNEVKVTKRCCVQFSIGNKYEDEVWCDVIPMDACHLLLGRPWQYDRRAHHDGYKNTYSF 488



 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 36/91 (39%), Positives = 57/91 (62%)
 Frame = -2

Query: 1080 LKLTRMRLGKPKIMSWEKIKKHMCAGFLPYNYICMMFQRLQNLRQGTRFFDDYTIEFYQL 901
            LK  R R G+ KI +W+K+++ +   FLP +Y   +F +  NLRQ T   ++YT+EF QL
Sbjct: 134  LKRQREREGRNKIRTWDKMRRELKRKFLPEHYRQEIFIKFHNLRQKTMTVEEYTMEFEQL 193

Query: 900  LDRNDNIETKEQKISRYIGGFRLEI*DVLNM 808
              + D  E +EQ ++RY+GG  + I DV+ +
Sbjct: 194  HMKCDVHEPEEQTVARYLGGLNVGIADVVQL 224


>ref|XP_006392773.1| hypothetical protein EUTSA_v10012229mg [Eutrema salsugineum]
           gi|557089351|gb|ESQ30059.1| hypothetical protein
           EUTSA_v10012229mg [Eutrema salsugineum]
          Length = 382

 Score =  122 bits (305), Expect = 3e-25
 Identities = 71/205 (34%), Positives = 105/205 (51%), Gaps = 1/205 (0%)
 Frame = -3

Query: 623 CFQCGEPGHQQSKCSCARRSVRDCLWKKLPTKMRL*KLRQSPFFIL*MI*QATRNWLRAI 444
           C+ CGEPGH+Q+ C               P + R   L +    +     +         
Sbjct: 136 CYSCGEPGHRQTAC---------------PNQQRRGLLLEDTEGVYNSADEEDTGIYEET 180

Query: 443 LVLSWWRSNFA*LLQQLCLAP-RQQDDWLRNQYLSVSCTISGKVCRLVIDSNNCVNVISE 267
           L      +    +L+++CLAP   ++ WLR      +CTI GK+C LVIDS +  NV+SE
Sbjct: 181 LTSGDSNAPVL-MLRRICLAPVGYEEPWLRTNIFRSTCTIKGKLCNLVIDSGSSRNVVSE 239

Query: 266 EAVPKLSI*IVKHSKTYKFPWLKKGSEVIVSH*AIVSFSIRNKYKDGVLCDVVCMDACHL 87
            AV KL +    H   Y   W+ +G++V ++H A+VSFSI   YKD + CD+  MD  HL
Sbjct: 240 TAVKKLGLKREDHPAPYALAWITEGTDVKITHRALVSFSIGAFYKDTIYCDIAPMDVSHL 299

Query: 86  LLD*P*QYDKRVIHDGRANTNNFQF 12
           +L  P Q+D+   H+G+ NT +F F
Sbjct: 300 ILGRPWQFDRDTCHNGKKNTYSFVF 324



 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
 Frame = -2

Query: 975 MFQRLQNLRQGTRFFDDYTIEFYQLLDRNDNIETKEQKISRYIGGFRLEI*DVLNMLELA 796
           MF RLQNLRQG+R  D+Y  EFY LL RN+  +T+ Q +SR+IGG R ++ + L   + +
Sbjct: 1   MFTRLQNLRQGSRTVDEYAEEFYLLLTRNELNDTQIQLVSRFIGGLRPQLQNSLTQFDPS 60

Query: 795 TISE-HQ*ALQYE 760
           T++E H+ AL +E
Sbjct: 61  TVAEAHRRALAFE 73


>ref|XP_007029783.1| Uncharacterized protein TCM_025656 [Theobroma cacao]
           gi|508718388|gb|EOY10285.1| Uncharacterized protein
           TCM_025656 [Theobroma cacao]
          Length = 505

 Score =  122 bits (305), Expect = 3e-25
 Identities = 59/120 (49%), Positives = 75/120 (62%)
 Frame = -3

Query: 377 QQDDWLRNQYLSVSCTISGKVCRLVIDSNNCVNVISEEAVPKLSI*IVKHSKTYKFPWLK 198
           + + WLR+      CT  GKVC ++IDS +C NVI+   V KL +    H   YK  WL+
Sbjct: 218 KDESWLRHNIFYTRCTSQGKVCNVIIDSGSCENVIANYMVEKLKLQTEVHPHPYKLQWLR 277

Query: 197 KGSEVIVSH*AIVSFSIRNKYKDGVLCDVVCMDACHLLLD*P*QYDKRVIHDGRANTNNF 18
           KG+EV V+    V FSI NKY+D V CD++ MDACHLLL  P QYD+R  HDG  NT +F
Sbjct: 278 KGNEVKVTKRCCVQFSIGNKYEDEVWCDIIPMDACHLLLGRPWQYDRRAHHDGYKNTYSF 337


>ref|XP_007033335.1| Uncharacterized protein TCM_019516, partial [Theobroma cacao]
           gi|508712364|gb|EOY04261.1| Uncharacterized protein
           TCM_019516, partial [Theobroma cacao]
          Length = 215

 Score =  115 bits (288), Expect = 3e-23
 Identities = 58/120 (48%), Positives = 73/120 (60%)
 Frame = -3

Query: 377 QQDDWLRNQYLSVSCTISGKVCRLVIDSNNCVNVISEEAVPKLSI*IVKHSKTYKFPWLK 198
           + + WLR+      CT  GKVC ++IDS +C NVI+   V KL +        YK  WL+
Sbjct: 45  KDESWLRHNIFHARCTSQGKVCNVIIDSGSCENVIANYMVEKLKLQTEVLPHPYKLQWLR 104

Query: 197 KGSEVIVSH*AIVSFSIRNKYKDGVLCDVVCMDACHLLLD*P*QYDKRVIHDGRANTNNF 18
           KG+EV V+    V FSI NKY+D V CDV+ MDAC LLL  P QYD+R  HDG  NT +F
Sbjct: 105 KGNEVKVTKHCCVQFSIGNKYEDEVWCDVIPMDACQLLLGRPWQYDRRAHHDGYKNTYSF 164


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  115 bits (287), Expect = 4e-23
 Identities = 56/117 (47%), Positives = 70/117 (59%)
 Frame = -3

Query: 359 RNQYLSVSCTISGKVCRLVIDSNNCVNVISEEAVPKLSI*IVKHSKTYKFPWLKKGSEVI 180
           R Q     CTI G+VC L+ID  +C NV S   + KLS+    H   YK  WL KG+EV 
Sbjct: 385 RQQIFRSRCTIKGRVCNLIIDGGSCTNVASSTLIEKLSLPTQDHPSPYKLRWLNKGAEVR 444

Query: 179 VSH*AIVSFSIRNKYKDGVLCDVVCMDACHLLLD*P*QYDKRVIHDGRANTNNFQFR 9
           V    +V+FSI   Y D  LCDV+ MDACHLLL  P ++D+  +H GR NT  F+FR
Sbjct: 445 VDKQCLVTFSIGKNYSDEALCDVLPMDACHLLLGRPWEFDRDSVHHGRDNTYTFKFR 501


>ref|XP_007009850.1| Uncharacterized protein TCM_043155 [Theobroma cacao]
           gi|508726763|gb|EOY18660.1| Uncharacterized protein
           TCM_043155 [Theobroma cacao]
          Length = 625

 Score =  112 bits (281), Expect = 2e-22
 Identities = 55/120 (45%), Positives = 73/120 (60%)
 Frame = -3

Query: 377 QQDDWLRNQYLSVSCTISGKVCRLVIDSNNCVNVISEEAVPKLSI*IVKHSKTYKFPWLK 198
           + +  LR+      CT  G VC ++IDS +C NV++   V KL +    H   YK  WL+
Sbjct: 338 KDESCLRHNIFYTRCTSQGNVCNVIIDSGSCENVVANYMVEKLKLPTEVHPHPYKLQWLR 397

Query: 197 KGSEVIVSH*AIVSFSIRNKYKDGVLCDVVCMDACHLLLD*P*QYDKRVIHDGRANTNNF 18
           KG+EV V+    + F IRNKY+D V CDV+ MDACHLLL  P QYD+R  +DG  NT +F
Sbjct: 398 KGNEVKVTKRCCIQFFIRNKYEDEVWCDVIPMDACHLLLGRPWQYDRRAHYDGYKNTYSF 457



 Score = 72.0 bits (175), Expect = 4e-10
 Identities = 37/91 (40%), Positives = 58/91 (63%)
 Frame = -2

Query: 1080 LKLTRMRLGKPKIMSWEKIKKHMCAGFLPYNYICMMFQRLQNLRQGTRFFDDYTIEFYQL 901
            LK  R R G+ KI +W+K+++ +   FLP +Y   +F +  NLRQ T   ++YT+EF QL
Sbjct: 103  LKRQREREGRNKIRTWDKMRRELKRKFLPEHYRQEIFIKFHNLRQKTMTVEEYTMEFEQL 162

Query: 900  LDRNDNIETKEQKISRYIGGFRLEI*DVLNM 808
              + D  E +EQ ++RY+GG  +EI DV+ +
Sbjct: 163  HMKCDVHEPEEQTLARYLGGLNVEIADVVQL 193


>ref|XP_007028192.1| Uncharacterized protein TCM_023754 [Theobroma cacao]
           gi|508716797|gb|EOY08694.1| Uncharacterized protein
           TCM_023754 [Theobroma cacao]
          Length = 440

 Score =  112 bits (281), Expect = 2e-22
 Identities = 56/120 (46%), Positives = 74/120 (61%)
 Frame = -3

Query: 377 QQDDWLRNQYLSVSCTISGKVCRLVIDSNNCVNVISEEAVPKLSI*IVKHSKTYKFPWLK 198
           + + WLR+       T  GKVC ++IDS +C NVI+   V KL +    H   YK  WL+
Sbjct: 153 KDESWLRHNIFYTRYTSQGKVCNVIIDSGSCENVIANYMVEKLKLPTEVHPHPYKLQWLR 212

Query: 197 KGSEVIVSH*AIVSFSIRNKYKDGVLCDVVCMDACHLLLD*P*QYDKRVIHDGRANTNNF 18
           KG+EV V+    V FSI +KY+D V CDV+ MDACHLLL  P QYD+R  +DG  N ++F
Sbjct: 213 KGNEVKVTKRCCVQFSIGSKYEDEVWCDVIPMDACHLLLGRPWQYDRRAHYDGYKNISSF 272


>ref|XP_007210666.1| hypothetical protein PRUPE_ppa022462mg [Prunus persica]
            gi|462406401|gb|EMJ11865.1| hypothetical protein
            PRUPE_ppa022462mg [Prunus persica]
          Length = 606

 Score =  111 bits (277), Expect = 6e-22
 Identities = 59/126 (46%), Positives = 85/126 (67%), Gaps = 1/126 (0%)
 Frame = -2

Query: 1077 KLTRMRLGKPKIMSWEKIKKHMCAGFLPYNYICMMFQRLQNLRQGTRFFDDYTIEFYQLL 898
            K TR+R GK KI +WEK++KHM + FLP NY  +++Q+LQNLRQG     +YT EFY+L+
Sbjct: 69   KATRLREGKEKIETWEKLRKHMRSTFLPPNYSKLVYQQLQNLRQGNHTVGEYTTEFYELV 128

Query: 897  DRNDNIETKEQKISRYIGGFRLEI*DVLNMLELATISE-HQ*ALQYEK*LNCRDSSAFGS 721
             R+D  ET EQ  SRYIGG R++  D LN+ +  ++++  Q ALQ EK ++ + +S    
Sbjct: 129  ARSDLAETDEQLESRYIGGMRVQFQDTLNLFDPFSVAKAQQRALQLEKHMSRKANSGGAW 188

Query: 720  AGTSTN 703
            +G S N
Sbjct: 189  SGNSPN 194



 Score =  102 bits (254), Expect = 3e-19
 Identities = 54/136 (39%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
 Frame = -3

Query: 407 LLQQLCLAPRQ---QDDWLRNQYLSVSCTISGKVCRLVIDSNNCVNVISEEAVPKLSI*I 237
           ++++ C  PR+    D WLRN      CTI GKVC+LVID  +C N+IS+EA+ KL +  
Sbjct: 303 MVRKTCFTPRETEGSDGWLRNNVFQSICTIGGKVCKLVIDPGSCENIISKEAIRKLGLET 362

Query: 236 VKHSKTYKFPWLKKGSEVIVSH*AIVSFSIRNKYKDGVLCDVVCMDACHLLLD*P*QYDK 57
             H   YK  WL+                     KD V C+VV MDA H+LL  P ++D+
Sbjct: 363 QPHPHPYKLSWLQ---------------------KDKVWCNVVPMDAGHILLGRPWEFDR 401

Query: 56  RVIHDGRANTNNFQFR 9
            V+HDGR NT +F  +
Sbjct: 402 AVVHDGRKNTYSFMLK 417


>ref|XP_006290417.1| hypothetical protein CARUB_v10019144mg, partial [Capsella rubella]
           gi|482559124|gb|EOA23315.1| hypothetical protein
           CARUB_v10019144mg, partial [Capsella rubella]
          Length = 110

 Score =  108 bits (271), Expect = 3e-21
 Identities = 55/109 (50%), Positives = 71/109 (65%)
 Frame = -3

Query: 338 SCTISGKVCRLVIDSNNCVNVISEEAVPKLSI*IVKHSKTYKFPWLKKGSEVIVSH*AIV 159
           +CTI GKVCR++IDS +  NVISEEAV KL++    H   Y   WL   ++  +S    V
Sbjct: 2   TCTIRGKVCRMIIDSGSFTNVISEEAVSKLALFTESHPTPYCLAWLNSSTDSRLSKRCRV 61

Query: 158 SFSIRNKYKDGVLCDVVCMDACHLLLD*P*QYDKRVIHDGRANTNNFQF 12
            F I   YKD V+CD++ MDACHLLL  P QYD+R++HDG ANT  F +
Sbjct: 62  PFLIGANYKDLVICDILPMDACHLLLGRPWQYDRRIMHDGFANTIIFTY 110


>ref|XP_004161321.1| PREDICTED: uncharacterized protein LOC101223713 [Cucumis sativus]
          Length = 645

 Score =  107 bits (268), Expect = 7e-21
 Identities = 50/134 (37%), Positives = 80/134 (59%)
 Frame = -3

Query: 407 LLQQLCLAPRQQDDWLRNQYLSVSCTISGKVCRLVIDSNNCVNVISEEAVPKLSI*IVKH 228
           ++Q++ + P+++    R+      CTI+G+VC ++ID+++  N ++++ V  L++    H
Sbjct: 272 VIQRVLITPKEEKKQQRHCLFKARCTINGRVCDVIIDNDSSKNFVAKKLVTVLNLKAEAH 331

Query: 227 SKTYKFPWLKKGSEVIVSH*AIVSFSIRNKYKDGVLCDVVCMDACHLLLD*P*QYDKRVI 48
             +YK  W++K  E  VS    V  SI N YKD ++CDV+ MD CHLLL  P QYD + +
Sbjct: 332 PTSYKIGWVRKEGEATVSEICTVPLSIENAYKDQIVCDVIEMDVCHLLLGRPWQYDTQSL 391

Query: 47  HDGRANTNNFQFRG 6
           H GR NT   Q  G
Sbjct: 392 HKGRENTYELQLMG 405


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score =  105 bits (261), Expect = 4e-20
 Identities = 57/128 (44%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
 Frame = -3

Query: 386 APRQQDDWLRNQYLSVSCTISGKVCRLVIDSNNCVNVISEEAVPKLSI*IVKHSKTYKFP 207
           AP + D   R+      CT+ G+VC L+I+  +C NV S   V KL +   +H   YK  
Sbjct: 389 APLEADQ--RSMIFRSRCTVQGRVCNLIINGGSCTNVASTTMVSKLGLPTQEHPNPYKLR 446

Query: 206 WLKKGSEVIVSH*AIVSFSIRNKYKDGVLCDVVC-MDACHLLLD*P*QYDKRVIHDGRAN 30
           WL K S V V    I+SFSI   YKD VLCDVV  MDACHLLL  P +YD+   H G+ N
Sbjct: 447 WLSKDSGVRVDKQCIISFSIGKMYKDEVLCDVVVPMDACHLLLGRPWEYDRNTTHQGKDN 506

Query: 29  TNNFQFRG 6
              F+ +G
Sbjct: 507 VYIFKHQG 514


>ref|XP_007050047.1| Uncharacterized protein TCM_003699 [Theobroma cacao]
           gi|508702308|gb|EOX94204.1| Uncharacterized protein
           TCM_003699 [Theobroma cacao]
          Length = 258

 Score =  102 bits (253), Expect = 4e-19
 Identities = 50/108 (46%), Positives = 65/108 (60%)
 Frame = -3

Query: 341 VSCTISGKVCRLVIDSNNCVNVISEEAVPKLSI*IVKHSKTYKFPWLKKGSEVIVSH*AI 162
           + C   GKVC ++I+S +C NV++   V KL +    H   YK  WL+KG+EV V     
Sbjct: 85  IRCISQGKVCNVIINSGSCENVVANYMVEKLKLPTKVHLHPYKLQWLRKGNEVKVMKHCC 144

Query: 161 VSFSIRNKYKDGVLCDVVCMDACHLLLD*P*QYDKRVIHDGRANTNNF 18
           V F I NKY+D + CDV+ MDACHL L  P QYD +  HDG  NT +F
Sbjct: 145 VQFYIGNKYQDEIWCDVIPMDACHLFLGRPCQYDCQAHHDGYKNTYSF 192


>ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
          Length = 1083

 Score =  101 bits (252), Expect = 5e-19
 Identities = 54/114 (47%), Positives = 68/114 (59%)
 Frame = -3

Query: 359 RNQYLSVSCTISGKVCRLVIDSNNCVNVISEEAVPKLSI*IVKHSKTYKFPWLKKGSEVI 180
           R+      C I  KVC ++ID  +C NV     V KL++  +KHS+ YK  WL    EV 
Sbjct: 229 RDNIFHTRCHIKDKVCSMIIDGGSCTNVAITSLVEKLNLKTLKHSRLYKLQWLNDYGEVK 288

Query: 179 VSH*AIVSFSIRNKYKDGVLCDVVCMDACHLLLD*P*QYDKRVIHDGRANTNNF 18
           V+   +VSFSI  +YKD VLCDVV M A H+LL  P QYD+RV HDG  N  +F
Sbjct: 289 VNKQVLVSFSI-GRYKDDVLCDVVPMHAGHILLGRPWQYDRRVTHDGYLNRYSF 341


>ref|XP_006299377.1| hypothetical protein CARUB_v10015536mg [Capsella rubella]
           gi|482568086|gb|EOA32275.1| hypothetical protein
           CARUB_v10015536mg [Capsella rubella]
          Length = 483

 Score =  100 bits (249), Expect = 1e-18
 Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
 Frame = -3

Query: 401 QQLCLAPR-QQDDWLRNQYLSVSCTISGKVCRLVIDSNNCVNVISEEAVPKLSI*IVKHS 225
           +Q C+AP    D+WLR +    +CTI  +VC  +IDS +  NVISE AV KL +    H 
Sbjct: 340 RQTCIAPPLPHDNWLRYKIFKSTCTIHDRVCTFIIDSGSSRNVISEMAVHKLELTAEPHP 399

Query: 224 KTYKFPWLKKGSEVIVSH*AIVSFSIRNKYKDGVLCDVVCMDACHLLLD*P*QYDKRVIH 45
           + Y   WL +  ++ V+H ++VSFSI   YKD    D+  MD  HL+L  P + D++  H
Sbjct: 400 RPYSLTWLHEDVDLRVTHRSLVSFSIGPYYKDRFYFDIAPMDISHLVLGRPWELDRKNFH 459

Query: 44  DGRANTNNF 18
           DG  NT +F
Sbjct: 460 DGEKNTYSF 468



 Score = 78.2 bits (191), Expect = 6e-12
 Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
 Frame = -2

Query: 1077 KLTRMRLGKPKIMSWEKIKKHMCAGFLPYNYICMMFQRLQNLRQGTRFFDDYTIEFYQLL 898
            KLTR R  K  I +W+K+KK +   F+P+N+   M+  LQNL+Q +R  D+Y  EFY LL
Sbjct: 123  KLTRARNWKAPIQTWDKLKKQLRKTFMPHNFDRTMYNILQNLKQDSRSVDEYAEEFYVLL 182

Query: 897  DRNDNIETKEQKISRYIGGFRLEI*DVLNMLELATISE-HQ*ALQYEK 757
             R +  +++ Q +S +IGG R ++  +L   +  ++SE H+ A  +E+
Sbjct: 183  TRTEVADSQFQLVSCFIGGLRSQLQSLLAQFDPTSLSEAHRRAASFEQ 230


>gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 572

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 50/123 (40%), Positives = 70/123 (56%)
 Frame = -3

Query: 380 RQQDDWLRNQYLSVSCTISGKVCRLVIDSNNCVNVISEEAVPKLSI*IVKHSKTYKFPWL 201
           +++D   R       C + GKVC L+ID  +C NV S   V KL +    H K YK  WL
Sbjct: 355 KEEDTGQRENLFHTRCFVQGKVCSLIIDGGSCTNVASTRLVSKLKLETKPHPKPYKLQWL 414

Query: 200 KKGSEVIVSH*AIVSFSIRNKYKDGVLCDVVCMDACHLLLD*P*QYDKRVIHDGRANTNN 21
            +  E++V+    + F I  KY+D VLCDVV M+A HLLL  P Q+D++  HDG +N  +
Sbjct: 415 NESVEMLVNKQVEICFKI-GKYEDVVLCDVVPMEASHLLLGRPWQFDRKANHDGYSNKYS 473

Query: 20  FQF 12
           F +
Sbjct: 474 FMY 476


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score = 99.0 bits (245), Expect = 3e-18
 Identities = 49/123 (39%), Positives = 71/123 (57%)
 Frame = -3

Query: 380 RQQDDWLRNQYLSVSCTISGKVCRLVIDSNNCVNVISEEAVPKLSI*IVKHSKTYKFPWL 201
           +++D   R     + C + GKVC L+ID  +C NV S   V +L +    H K YK  WL
Sbjct: 355 KEEDTSQRENLFHIRCFVQGKVCSLIIDGGSCTNVASTRLVSRLKLETKPHPKPYKLQWL 414

Query: 200 KKGSEVIVSH*AIVSFSIRNKYKDGVLCDVVCMDACHLLLD*P*QYDKRVIHDGRANTNN 21
            +  E++V+    + F I  KY+D VLCDVV M+A HLLL  P Q+D++  HDG +N  +
Sbjct: 415 NESVEMLVNKQVEICFKI-GKYEDVVLCDVVPMEASHLLLGRPWQFDRKANHDGYSNKYS 473

Query: 20  FQF 12
           F +
Sbjct: 474 FMY 476


>ref|XP_007049887.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
           gi|508702148|gb|EOX94044.1| DNA/RNA polymerases
           superfamily protein [Theobroma cacao]
          Length = 546

 Score = 97.4 bits (241), Expect = 9e-18
 Identities = 51/120 (42%), Positives = 67/120 (55%)
 Frame = -3

Query: 377 QQDDWLRNQYLSVSCTISGKVCRLVIDSNNCVNVISEEAVPKLSI*IVKHSKTYKFPWLK 198
           + +DW R           GKVC LVID  +  N+IS+EAV KL +   KH   YK  WLK
Sbjct: 325 EAEDWKRRSIFRTRVVCEGKVCDLVIDGGSMENIISKEAVNKLKLPTNKHPYPYKIGWLK 384

Query: 197 KGSEVIVSH*AIVSFSIRNKYKDGVLCDVVCMDACHLLLD*P*QYDKRVIHDGRANTNNF 18
           KG EV V+   +V F++ N   D  LCDVV MD  H+L+  P  YD  ++H  + NT +F
Sbjct: 385 KGHEVPVTTQCLVKFTMGNNLDDEALCDVVPMDVGHILVGRPWLYDHDMVHKTKPNTYSF 444



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
 Frame = -2

Query: 1068 RMRLGKPKIMSWEKIKKHMCAGFLPYNYICMMFQRLQNLRQGTRFFDDYTIEFYQLLDRN 889
            R R GK KI +WE +K  +   FLP +Y   ++++   L+Q     ++YT EF  L  R 
Sbjct: 75   RARQGKLKISTWEHMKSKLRKQFLPADYTMELYEKFHCLKQNNMTVEEYTSEFNNLSIRV 134

Query: 888  DNIETKEQKISRYIGGFRLEI*DVLNMLELATISE-HQ*ALQYEK 757
               E+ EQ  SRY+ G    I D + ++ L  I +  Q AL  EK
Sbjct: 135  GLAESNEQITSRYLAGLNHSIRDEMGVVRLYNIEDARQYALSAEK 179


>emb|CAN64780.1| hypothetical protein VITISV_043231 [Vitis vinifera]
          Length = 898

 Score = 97.4 bits (241), Expect = 9e-18
 Identities = 50/107 (46%), Positives = 69/107 (64%)
 Frame = -3

Query: 338 SCTISGKVCRLVIDSNNCVNVISEEAVPKLSI*IVKHSKTYKFPWLKKGSEVIVSH*AIV 159
           SCT  GKVC ++IDS +C NV+++E V KL++ I    + YK    ++G+ + V+   +V
Sbjct: 482 SCTSHGKVCNVIIDSGSCTNVVAKEMVTKLNLTIKPLLQPYKIQLFQRGNGLKVTKRFLV 541

Query: 158 SFSIRNKYKDGVLCDVVCMDACHLLLD*P*QYDKRVIHDGRANTNNF 18
           SFSI   YKD V CD + MDACHLLL  P QYD+ V H    NT++F
Sbjct: 542 SFSIGKNYKDEVWCDAMSMDACHLLLRRPWQYDQNVSHYRFKNTHSF 588


>ref|XP_006607002.1| PREDICTED: uncharacterized protein LOC100788838 [Glycine max]
          Length = 519

 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 50/119 (42%), Positives = 67/119 (56%)
 Frame = -3

Query: 371 DDWLRNQYLSVSCTISGKVCRLVIDSNNCVNVISEEAVPKLSI*IVKHSKTYKFPWLKKG 192
           DD  R       C I+GK+C L++D  +C NV S   V KL++    H + YK  WL + 
Sbjct: 380 DDNQRENIFHTRCVINGKLCSLIVDGGSCTNVASSTLVTKLNLETKPHPRPYKLQWLSED 439

Query: 191 SEVIVSH*AIVSFSIRNKYKDGVLCDVVCMDACHLLLD*P*QYDKRVIHDGRANTNNFQ 15
            EV V+    V  +I  +Y D VLCDVV M+A H+LL  P QYD + +HDG  N  +FQ
Sbjct: 440 EEVKVTQQVEVCLTI-GRYNDKVLCDVVPMEATHVLLGRPWQYDTKAVHDGFTNKISFQ 497