BLASTX nr result
ID: Sinomenium21_contig00025891
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00025891
(308 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containi... 109 5e-22
ref|XP_007013303.1| Tetratricopeptide repeat (TPR)-like superfam... 100 3e-19
ref|XP_006475767.1| PREDICTED: pentatricopeptide repeat-containi... 99 5e-19
ref|XP_006475766.1| PREDICTED: pentatricopeptide repeat-containi... 99 5e-19
ref|XP_006451033.1| hypothetical protein CICLE_v10010814mg, part... 99 5e-19
emb|CBI28135.3| unnamed protein product [Vitis vinifera] 96 4e-18
ref|XP_007013304.1| Tetratricopeptide repeat (TPR)-like superfam... 96 5e-18
ref|NP_200385.1| pentatricopeptide repeat-containing protein CRR... 84 3e-14
gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiol... 82 8e-14
gb|AEP33738.1| chlororespiratory reduction 21, partial [Matthiol... 82 8e-14
ref|XP_006280016.1| hypothetical protein CARUB_v10025890mg [Caps... 81 2e-13
gb|AEP33730.1| chlororespiratory reduction 21, partial [Capsella... 81 2e-13
ref|XP_002866111.1| pentatricopeptide repeat-containing protein ... 81 2e-13
gb|AEP33742.1| chlororespiratory reduction 21 [Barbarea verna] 80 2e-13
gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiol... 80 2e-13
ref|XP_004288824.1| PREDICTED: pentatricopeptide repeat-containi... 80 3e-13
gb|AEP33732.1| chlororespiratory reduction 21, partial [Draba ne... 80 4e-13
gb|AEP33731.1| chlororespiratory reduction 21, partial [Crucihim... 79 5e-13
gb|AEP33727.1| chlororespiratory reduction 21 [Arabis hirsuta] 79 5e-13
ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
>ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 109 bits (272), Expect = 5e-22
Identities = 53/102 (51%), Positives = 75/102 (73%)
Frame = +3
Query: 3 SLPLHSLPNSNFTHFKATKIRENLGFKPIHLSELPENEKNARILYKSYFQRLSSLCKERQ 182
SLP+ + PN + +HFK R++ F L++L E ++N R LYKSYF +SSLCK+
Sbjct: 3 SLPITTTPNPHTSHFKP---RKSSKFASTRLAKLQEKDENRRSLYKSYFHHISSLCKDGH 59
Query: 183 VEEAVSVLNEMGFNNIQIGPEIFGEILQGCVHERALFTGEQI 308
++E+V +L+EM F + QIGPEI+GE+LQGCV+ERAL TG+QI
Sbjct: 60 LQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQI 101
>ref|XP_007013303.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
[Theobroma cacao] gi|508783666|gb|EOY30922.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao]
Length = 836
Score = 100 bits (248), Expect = 3e-19
Identities = 48/91 (52%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 39 THFKATKIRENLGF-KPIHLSELPENEKNARILYKSYFQRLSSLCKERQVEEAVSVLNEM 215
+HF++TK ++L +PIH +E +N R L KSYF +SSLCK+ Q+++AV +L EM
Sbjct: 12 SHFRSTKTIKSLSSNEPIHFTEFNGTTRNHRTLSKSYFHSISSLCKDGQIQQAVDLLTEM 71
Query: 216 GFNNIQIGPEIFGEILQGCVHERALFTGEQI 308
N +GPEI+GEILQGCV+ER LFTG+QI
Sbjct: 72 DSKNFPVGPEIYGEILQGCVYERDLFTGQQI 102
>ref|XP_006475767.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like isoform X2 [Citrus sinensis]
Length = 622
Score = 99.4 bits (246), Expect = 5e-19
Identities = 48/95 (50%), Positives = 68/95 (71%)
Frame = +3
Query: 24 PNSNFTHFKATKIRENLGFKPIHLSELPENEKNARILYKSYFQRLSSLCKERQVEEAVSV 203
PN F+H TK ++ L HL++L E++ + LYKSYF ++SSL KE+Q+ EAV +
Sbjct: 10 PNPKFSH---TKPQKPLKLSQTHLTKLRESDNSYESLYKSYFHQISSLSKEKQIREAVDL 66
Query: 204 LNEMGFNNIQIGPEIFGEILQGCVHERALFTGEQI 308
L EM N QIGPEI+GE+LQGCV++R ++TG+QI
Sbjct: 67 LTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQI 101
>ref|XP_006475766.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like isoform X1 [Citrus sinensis]
Length = 840
Score = 99.4 bits (246), Expect = 5e-19
Identities = 48/95 (50%), Positives = 68/95 (71%)
Frame = +3
Query: 24 PNSNFTHFKATKIRENLGFKPIHLSELPENEKNARILYKSYFQRLSSLCKERQVEEAVSV 203
PN F+H TK ++ L HL++L E++ + LYKSYF ++SSL KE+Q+ EAV +
Sbjct: 10 PNPKFSH---TKPQKPLKLSQTHLTKLRESDNSYESLYKSYFHQISSLSKEKQIREAVDL 66
Query: 204 LNEMGFNNIQIGPEIFGEILQGCVHERALFTGEQI 308
L EM N QIGPEI+GE+LQGCV++R ++TG+QI
Sbjct: 67 LTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQI 101
>ref|XP_006451033.1| hypothetical protein CICLE_v10010814mg, partial [Citrus clementina]
gi|557554259|gb|ESR64273.1| hypothetical protein
CICLE_v10010814mg, partial [Citrus clementina]
Length = 830
Score = 99.4 bits (246), Expect = 5e-19
Identities = 48/95 (50%), Positives = 68/95 (71%)
Frame = +3
Query: 24 PNSNFTHFKATKIRENLGFKPIHLSELPENEKNARILYKSYFQRLSSLCKERQVEEAVSV 203
PN F+H TK ++ L HL++L E++ + LYKSYF ++SSL KE+Q+ EAV +
Sbjct: 10 PNPKFSH---TKPQKPLKLSQTHLTKLRESDNSYESLYKSYFHQISSLSKEKQIREAVDL 66
Query: 204 LNEMGFNNIQIGPEIFGEILQGCVHERALFTGEQI 308
L EM N QIGPEI+GE+LQGCV++R ++TG+QI
Sbjct: 67 LTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQI 101
>emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 96.3 bits (238), Expect = 4e-18
Identities = 44/77 (57%), Positives = 60/77 (77%)
Frame = +3
Query: 78 FKPIHLSELPENEKNARILYKSYFQRLSSLCKERQVEEAVSVLNEMGFNNIQIGPEIFGE 257
F L++L E ++N R LYKSYF +SSLCK+ ++E+V +L+EM F + QIGPEI+GE
Sbjct: 1120 FASTRLAKLQEKDENRRSLYKSYFHHISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGE 1179
Query: 258 ILQGCVHERALFTGEQI 308
+LQGCV+ERAL TG+QI
Sbjct: 1180 LLQGCVYERALHTGQQI 1196
>ref|XP_007013304.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 2 [Theobroma cacao] gi|508783667|gb|EOY30923.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative isoform 2 [Theobroma cacao]
Length = 779
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +3
Query: 39 THFKATKIRENLGF-KPIHLSELPENEKNARILYKSYFQRLSSLCKERQVEEAVSVLNEM 215
+HF++TK ++L +PIH +E +N R L KSYF +SSLCK+ Q+++AV +L EM
Sbjct: 12 SHFRSTKTIKSLSSNEPIHFTEFNGTTRNHRTLSKSYFHSISSLCKDGQIQQAVDLLTEM 71
Query: 216 GFNNIQIGPEIFGEILQGCVHERALFTG 299
N +GPEI+GEILQGCV+ER LFTG
Sbjct: 72 DSKNFPVGPEIYGEILQGCVYERDLFTG 99
>ref|NP_200385.1| pentatricopeptide repeat-containing protein CRR21 [Arabidopsis
thaliana] gi|75171613|sp|Q9FM64.1|PP431_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g55740, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 21; Flags: Precursor
gi|9758608|dbj|BAB09241.1| selenium-binding protein-like
[Arabidopsis thaliana] gi|332009292|gb|AED96675.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 830
Score = 83.6 bits (205), Expect = 3e-14
Identities = 46/102 (45%), Positives = 66/102 (64%)
Frame = +3
Query: 3 SLPLHSLPNSNFTHFKATKIRENLGFKPIHLSELPENEKNARILYKSYFQRLSSLCKERQ 182
SLP +++PN K+ ++ KP S +E+ SYF R+SSLCK +
Sbjct: 3 SLPFNTIPN---------KVPFSVSSKP---SSKHHDEQAHSPSSTSYFHRVSSLCKNGE 50
Query: 183 VEEAVSVLNEMGFNNIQIGPEIFGEILQGCVHERALFTGEQI 308
++EA+S++ EM F N++IGPEI+GEILQGCV+ER L TG+QI
Sbjct: 51 IKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQI 92
>gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiola maderensis]
Length = 807
Score = 82.0 bits (201), Expect = 8e-14
Identities = 40/67 (59%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = +3
Query: 111 NEKNARI-LYKSYFQRLSSLCKERQVEEAVSVLNEMGFNNIQIGPEIFGEILQGCVHERA 287
++ ARI L SYF R+SSLCK ++ EA+S++ EM + NI+IGPEI+GEILQGCV+ER
Sbjct: 2 HDDQARIPLSTSYFHRVSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERD 61
Query: 288 LFTGEQI 308
L TG+QI
Sbjct: 62 LCTGQQI 68
>gb|AEP33738.1| chlororespiratory reduction 21, partial [Matthiola incana]
Length = 784
Score = 82.0 bits (201), Expect = 8e-14
Identities = 40/67 (59%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = +3
Query: 111 NEKNARI-LYKSYFQRLSSLCKERQVEEAVSVLNEMGFNNIQIGPEIFGEILQGCVHERA 287
++ ARI L SYF R+SSLCK ++ EA+S++ EM + NI+IGPEI+GEILQGCV+ER
Sbjct: 3 HDDQARIPLSTSYFHRVSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERD 62
Query: 288 LFTGEQI 308
L TG+QI
Sbjct: 63 LCTGQQI 69
>ref|XP_006280016.1| hypothetical protein CARUB_v10025890mg [Capsella rubella]
gi|482548720|gb|EOA12914.1| hypothetical protein
CARUB_v10025890mg [Capsella rubella]
Length = 830
Score = 80.9 bits (198), Expect = 2e-13
Identities = 36/56 (64%), Positives = 48/56 (85%)
Frame = +3
Query: 141 SYFQRLSSLCKERQVEEAVSVLNEMGFNNIQIGPEIFGEILQGCVHERALFTGEQI 308
SYF R+SSLCK +++EA+S++ EM F N++IGPEI+GEILQGCV+ER L TG+QI
Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQI 92
>gb|AEP33730.1| chlororespiratory reduction 21, partial [Capsella bursa-pastoris]
Length = 820
Score = 80.9 bits (198), Expect = 2e-13
Identities = 36/56 (64%), Positives = 48/56 (85%)
Frame = +3
Query: 141 SYFQRLSSLCKERQVEEAVSVLNEMGFNNIQIGPEIFGEILQGCVHERALFTGEQI 308
SYF R+SSLCK +++EA+S++ EM F N++IGPEI+GEILQGCV+ER L TG+QI
Sbjct: 26 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQI 81
>ref|XP_002866111.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297311946|gb|EFH42370.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 829
Score = 80.9 bits (198), Expect = 2e-13
Identities = 36/56 (64%), Positives = 48/56 (85%)
Frame = +3
Query: 141 SYFQRLSSLCKERQVEEAVSVLNEMGFNNIQIGPEIFGEILQGCVHERALFTGEQI 308
SYF R+SSLCK +++EA+S++ EM F N++IGPEI+GEILQGCV+ER L TG+QI
Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQI 92
>gb|AEP33742.1| chlororespiratory reduction 21 [Barbarea verna]
Length = 607
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/56 (64%), Positives = 47/56 (83%)
Frame = +3
Query: 141 SYFQRLSSLCKERQVEEAVSVLNEMGFNNIQIGPEIFGEILQGCVHERALFTGEQI 308
SYF R+SSLCK ++ EA+S++ EM F N++IGPEI+GEILQGCV+ER L TG+QI
Sbjct: 31 SYFHRVSSLCKNGEIREALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQI 86
>gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiola sinuata]
Length = 794
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/56 (64%), Positives = 47/56 (83%)
Frame = +3
Query: 141 SYFQRLSSLCKERQVEEAVSVLNEMGFNNIQIGPEIFGEILQGCVHERALFTGEQI 308
SYF R+SSLCK ++ EA+S++ EM + NI+IGPEI+GEILQGCV+ER L TG+QI
Sbjct: 1 SYFHRVSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQI 56
>ref|XP_004288824.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 831
Score = 80.1 bits (196), Expect = 3e-13
Identities = 41/102 (40%), Positives = 65/102 (63%)
Frame = +3
Query: 3 SLPLHSLPNSNFTHFKATKIRENLGFKPIHLSELPENEKNARILYKSYFQRLSSLCKERQ 182
SLP ++PN + + K + E +L EN + L KSYF ++S+L K+ +
Sbjct: 3 SLPYRTIPNPHPSSSKNSTPIETHKKSQAQFPKLQENATKNQTLSKSYFTQMSTLSKQSK 62
Query: 183 VEEAVSVLNEMGFNNIQIGPEIFGEILQGCVHERALFTGEQI 308
++EAV +L +M +++IGPEI+GE+LQ CV++RAL TG+QI
Sbjct: 63 IQEAVDLLIQMDLKSLRIGPEIYGELLQACVYDRALQTGKQI 104
>gb|AEP33732.1| chlororespiratory reduction 21, partial [Draba nemorosa]
Length = 829
Score = 79.7 bits (195), Expect = 4e-13
Identities = 35/56 (62%), Positives = 47/56 (83%)
Frame = +3
Query: 141 SYFQRLSSLCKERQVEEAVSVLNEMGFNNIQIGPEIFGEILQGCVHERALFTGEQI 308
SYF R+SSLCK+ ++ EA+ ++ EMG N++IGPEI+GEILQGCV+ER L TG+QI
Sbjct: 32 SYFHRVSSLCKKGEIREALGLVTEMGSRNVRIGPEIYGEILQGCVYERDLSTGQQI 87
>gb|AEP33731.1| chlororespiratory reduction 21, partial [Crucihimalaya wallichii]
Length = 830
Score = 79.3 bits (194), Expect = 5e-13
Identities = 35/56 (62%), Positives = 48/56 (85%)
Frame = +3
Query: 141 SYFQRLSSLCKERQVEEAVSVLNEMGFNNIQIGPEIFGEILQGCVHERALFTGEQI 308
SYF R+SSLCK +++EA+S++ +M F N++IGPEI+GEILQGCV+ER L TG+QI
Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTKMDFRNLRIGPEIYGEILQGCVYERDLCTGKQI 92
>gb|AEP33727.1| chlororespiratory reduction 21 [Arabis hirsuta]
Length = 824
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/56 (64%), Positives = 46/56 (82%)
Frame = +3
Query: 141 SYFQRLSSLCKERQVEEAVSVLNEMGFNNIQIGPEIFGEILQGCVHERALFTGEQI 308
SYF R+SSLCK ++ EA+S++ EM F N++IGPEIFGEILQGCV+ R L TG+QI
Sbjct: 29 SYFHRVSSLCKNGEIREALSLVTEMDFRNLRIGPEIFGEILQGCVYXRDLRTGQQI 84
>ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
gi|449520209|ref|XP_004167126.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
Length = 840
Score = 78.2 bits (191), Expect = 1e-12
Identities = 33/77 (42%), Positives = 52/77 (67%)
Frame = +3
Query: 78 FKPIHLSELPENEKNARILYKSYFQRLSSLCKERQVEEAVSVLNEMGFNNIQIGPEIFGE 257
+ P H + + N +I YKSY +SSLCK+ + EA+ ++ ++ +I IGP+++GE
Sbjct: 24 YSPTHFASFSQIASNVQISYKSYLNHISSLCKQGHLLEALDLVTDLELEDITIGPDVYGE 83
Query: 258 ILQGCVHERALFTGEQI 308
+LQGCV+ERAL G+QI
Sbjct: 84 LLQGCVYERALSLGQQI 100