BLASTX nr result
ID: Sinomenium21_contig00025746
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00025746
(276 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prun... 82 8e-14
ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prun... 81 2e-13
ref|XP_007212569.1| hypothetical protein PRUPE_ppa015570mg, part... 80 3e-13
ref|XP_007226836.1| hypothetical protein PRUPE_ppa017565mg, part... 79 5e-13
gb|AAS49090.1| At2g06190 [Arabidopsis thaliana] 79 5e-13
gb|AAD19756.1| putative Ty3-gypsy-like retroelement pol polyprot... 79 5e-13
ref|XP_007200198.1| hypothetical protein PRUPE_ppa016013mg, part... 79 7e-13
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 79 7e-13
gb|AAD17351.1| contains similarity to retrovirus-related polypro... 79 9e-13
gb|AAP43914.1| integrase [Gossypium raimondii] 79 9e-13
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 78 1e-12
gb|AAP43919.1| integrase [Gossypium hirsutum] 78 1e-12
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 78 1e-12
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 78 1e-12
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 77 2e-12
gb|AAX14649.1| gag-pol polyprotein [Setaria pumila] 77 2e-12
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 77 2e-12
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 77 2e-12
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 77 2e-12
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 77 2e-12
>ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
gi|462405925|gb|EMJ11389.1| hypothetical protein
PRUPE_ppa017790mg [Prunus persica]
Length = 1485
Score = 82.0 bits (201), Expect = 8e-14
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
M+HFI CRKT DA ++AKLFFREVVRLHGVP SITSDRD KFL+ FW
Sbjct: 1202 MAHFIACRKTADASNIAKLFFREVVRLHGVPTSITSDRDTKFLSHFW 1248
Score = 58.2 bits (139), Expect = 1e-06
Identities = 23/44 (52%), Positives = 35/44 (79%)
Frame = -3
Query: 268 KQPLGEYLIQDWYLFKWSRLCIPKSSLREKLLREVHSNNLSGHV 137
++P+ +Y + + YLFK ++LCIP SSLREKL+R++H LSGH+
Sbjct: 1073 QEPMADYFLNEGYLFKGNQLCIPVSSLREKLIRDLHGGGLSGHL 1116
>ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
gi|462402874|gb|EMJ08431.1| hypothetical protein
PRUPE_ppa026856mg [Prunus persica]
Length = 1493
Score = 80.9 bits (198), Expect = 2e-13
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
M+HFI C+KT DA ++AKLFFREVVRLHGVP SITSDRD KFL+ FW
Sbjct: 1210 MAHFIACKKTADASNIAKLFFREVVRLHGVPTSITSDRDTKFLSHFW 1256
Score = 57.0 bits (136), Expect = 3e-06
Identities = 23/44 (52%), Positives = 35/44 (79%)
Frame = -3
Query: 268 KQPLGEYLIQDWYLFKWSRLCIPKSSLREKLLREVHSNNLSGHV 137
++P+ +Y + + YLFK ++LCIP SSLREKL+R++H LSGH+
Sbjct: 1081 QEPMTDYFLTEGYLFKGNQLCIPVSSLREKLIRDLHGGGLSGHL 1124
>ref|XP_007212569.1| hypothetical protein PRUPE_ppa015570mg, partial [Prunus persica]
gi|462408434|gb|EMJ13768.1| hypothetical protein
PRUPE_ppa015570mg, partial [Prunus persica]
Length = 541
Score = 80.1 bits (196), Expect = 3e-13
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
M+HFI C+KT DA ++AKLFFREVVRLHG+P SITSDRD KFL+ FW
Sbjct: 309 MAHFIACKKTDDASNIAKLFFREVVRLHGIPTSITSDRDTKFLSHFW 355
Score = 58.2 bits (139), Expect = 1e-06
Identities = 23/44 (52%), Positives = 35/44 (79%)
Frame = -3
Query: 268 KQPLGEYLIQDWYLFKWSRLCIPKSSLREKLLREVHSNNLSGHV 137
++P+ +Y + + YLFK ++LCIP SSLREKL+R++H LSGH+
Sbjct: 180 QEPMADYFLNEGYLFKGNQLCIPVSSLREKLIRDLHGGGLSGHL 223
>ref|XP_007226836.1| hypothetical protein PRUPE_ppa017565mg, partial [Prunus persica]
gi|462423772|gb|EMJ28035.1| hypothetical protein
PRUPE_ppa017565mg, partial [Prunus persica]
Length = 914
Score = 79.3 bits (194), Expect = 5e-13
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
M+HFI C+KT DA ++AKLFF+EVVRLHGVP SITSDRD KFL+ FW
Sbjct: 672 MAHFIVCKKTADASNIAKLFFKEVVRLHGVPTSITSDRDTKFLSHFW 718
>gb|AAS49090.1| At2g06190 [Arabidopsis thaliana]
Length = 148
Score = 79.3 bits (194), Expect = 5e-13
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
M+HFI C+KT DA ++AKLFF+EVVRLHGVP SITSDRD KFL+ FW
Sbjct: 27 MTHFIACKKTADASNIAKLFFKEVVRLHGVPKSITSDRDTKFLSHFW 73
>gb|AAD19756.1| putative Ty3-gypsy-like retroelement pol polyprotein [Arabidopsis
thaliana]
Length = 280
Score = 79.3 bits (194), Expect = 5e-13
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
M+HFI C+KT DA ++AKLFF+EVVRLHGVP SITSDRD KFL+ FW
Sbjct: 27 MTHFIACKKTADASNIAKLFFKEVVRLHGVPKSITSDRDTKFLSHFW 73
>ref|XP_007200198.1| hypothetical protein PRUPE_ppa016013mg, partial [Prunus persica]
gi|462395598|gb|EMJ01397.1| hypothetical protein
PRUPE_ppa016013mg, partial [Prunus persica]
Length = 1057
Score = 79.0 bits (193), Expect = 7e-13
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
M+HFI C+KT DA ++AKLFFREVVRLHGVP SITS+RD KFL+ FW
Sbjct: 768 MTHFIACKKTADASNIAKLFFREVVRLHGVPTSITSNRDTKFLSHFW 814
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 79.0 bits (193), Expect = 7e-13
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
M+HFIPC KT DA H+A LFFRE+VRLHGVP +I SDRD KFL+ FW
Sbjct: 1295 MAHFIPCHKTDDASHIADLFFREIVRLHGVPNTIVSDRDTKFLSHFW 1341
>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
putative polyprotein [Arabidopsis thaliana]
Length = 1138
Score = 78.6 bits (192), Expect = 9e-13
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
M+HFIPC KT DA H+A LFFREVVRLHG+P +I SDRD KFL+ FW
Sbjct: 861 MAHFIPCHKTDDAMHIANLFFREVVRLHGMPKTIVSDRDTKFLSYFW 907
>gb|AAP43914.1| integrase [Gossypium raimondii]
Length = 340
Score = 78.6 bits (192), Expect = 9e-13
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
M+HFIPC KT DA HVA LFFREVVRLHG+P +I SDRD KFL+ FW
Sbjct: 265 MAHFIPCHKTDDATHVADLFFREVVRLHGIPRTIVSDRDAKFLSHFW 311
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
M+HFIPC KT DA H+A LFFREVVRLHG+P +I SDRD KFL+ FW
Sbjct: 1486 MAHFIPCHKTDDAIHIANLFFREVVRLHGMPKTIVSDRDTKFLSYFW 1532
>gb|AAP43919.1| integrase [Gossypium hirsutum]
Length = 334
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
MSHFIPC KT DA HVA LFF+EVVRLHG+P +I SDRD KFL+ FW
Sbjct: 265 MSHFIPCHKTDDATHVADLFFKEVVRLHGIPKTIVSDRDVKFLSHFW 311
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
M+HFIPC KT DA H+A LFFRE+VRLHGVP +I SDRD KFL+ FW
Sbjct: 1298 MAHFIPCHKTDDATHIADLFFREIVRLHGVPNTIVSDRDAKFLSHFW 1344
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
M HFIPC KT DA H+A LFFRE+VRLHGVP +I SDRD KFL+ FW
Sbjct: 1274 MVHFIPCHKTDDASHIADLFFREIVRLHGVPNTIVSDRDTKFLSHFW 1320
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
M+HFIPC K+ DA HVA LFFRE+VRLHGVP +I SDRD KFL+ FW
Sbjct: 1323 MAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFW 1369
>gb|AAX14649.1| gag-pol polyprotein [Setaria pumila]
Length = 185
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
M+HFIPC KT DA H+A LFFRE+VRLHGVP +I SDRD KFL+ FW
Sbjct: 111 MAHFIPCHKTDDAPHIADLFFREIVRLHGVPNTIVSDRDVKFLSYFW 157
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
M+HFIPC K+ DA HVA LFFRE+VRLHGVP +I SDRD KFL+ FW
Sbjct: 1323 MAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFW 1369
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
M+HFIPC K+ DA HVA LFFRE+VRLHGVP +I SDRD KFL+ FW
Sbjct: 636 MAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFW 682
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
M+HFIPC K+ DA HVA LFFRE+VRLHGVP +I SDRD KFL+ FW
Sbjct: 1219 MAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFW 1265
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = -1
Query: 141 MSHFIPCRKTTDAHHVAKLFFREVVRLHGVPLSITSDRDNKFLAAFW 1
M+HFIPC K+ DA HVA LFFRE+VRLHGVP +I SDRD KFL+ FW
Sbjct: 1323 MAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFW 1369