BLASTX nr result
ID: Sinomenium21_contig00025501
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00025501
(282 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAH03514.1| centromere specific histone H3 variant [Nicotian... 84 3e-14
dbj|BAH03515.1| centromere specific histone H3 variant [Nicotian... 83 5e-14
ref|XP_006339687.1| PREDICTED: histone H3-like centromeric prote... 81 2e-13
dbj|BAO51831.1| centromere specific histone H3 [Torenia fournier... 78 1e-12
ref|XP_002281073.1| PREDICTED: histone H3-like centromeric prote... 76 6e-12
ref|NP_001055894.1| Os05g0489800 [Oryza sativa Japonica Group] g... 74 2e-11
gb|ADN92700.1| centromere-specific H3 variant protein [Brassica ... 74 3e-11
ref|XP_007219168.1| hypothetical protein PRUPE_ppa016454mg, part... 73 4e-11
dbj|BAF49717.1| putative centromeric histone H3-like protein_1 [... 72 6e-11
gb|AAT96389.1| centromeric histone [Olimarabidopsis pumila] gi|1... 72 6e-11
dbj|BAF49730.1| centromeric histone H3-like protein-1 [Eruca sat... 72 8e-11
gb|ABE27638.1| histone H3 [Arabidopsis lyrata subsp. petraea] gi... 72 8e-11
gb|AAT96392.1| centromeric histone [Arabidopsis lyrata] 72 8e-11
gb|ACX30894.1| CENH3 [Oryza punctata] gi|260072761|gb|ACX30896.1... 72 1e-10
gb|ACX30891.1| CENH3 [Oryza minuta] gi|260072763|gb|ACX30897.1| ... 72 1e-10
dbj|BAF63140.1| centromeric histone H3-like protein_1 [Arabidops... 72 1e-10
gb|ABE27637.1| histone H3 [Arabidopsis lyrata subsp. petraea] gi... 72 1e-10
gb|ADN92701.1| centromere-specific H3 variant protein [Brassica ... 71 1e-10
gb|ADB03182.1| centromeric histone H3 [Hordeum bulbosum] 71 1e-10
dbj|BAF63142.1| centromeric histone H3-like protein [Brassica ol... 71 1e-10
>dbj|BAH03514.1| centromere specific histone H3 variant [Nicotiana tabacum]
gi|218744598|dbj|BAH03517.1| centromere specific histone
H3 variant [Nicotiana tomentosiformis]
Length = 156
Score = 83.6 bits (205), Expect = 3e-14
Identities = 48/97 (49%), Positives = 58/97 (59%), Gaps = 13/97 (13%)
Frame = +2
Query: 29 MARSKHFDTKXXXXXXXXGPTSEPSAGASTPSRPSSTP-------------KVRRKPHRY 169
MAR+KH + PT+ SA A+ S P STP + ++K RY
Sbjct: 1 MARTKHLALRKQSRPPSR-PTATRSAAAAASSAPQSTPTRTSQRTAPSTPGRTQKKKTRY 59
Query: 170 RPGTVALREIRHFQKTWKLLIPAAPFIRIVKEVTAGF 280
RPGTVALREIR FQKTW LLIPAAPFIR+VKE++ F
Sbjct: 60 RPGTVALREIRRFQKTWDLLIPAAPFIRLVKEISHFF 96
>dbj|BAH03515.1| centromere specific histone H3 variant [Nicotiana tabacum]
gi|218744596|dbj|BAH03516.1| centromere specific histone
H3 variant [Nicotiana sylvestris]
Length = 157
Score = 82.8 bits (203), Expect = 5e-14
Identities = 45/97 (46%), Positives = 57/97 (58%), Gaps = 13/97 (13%)
Frame = +2
Query: 29 MARSKHFDTKXXXXXXXXGPTSEPSAGASTPSRPSSTP-------------KVRRKPHRY 169
MAR+KH + + +A A++ S P STP + ++K RY
Sbjct: 1 MARTKHLALRKQSRPPSRPTATRSAAAAASSSAPQSTPTRTSQRTAPSTPGRTQKKKTRY 60
Query: 170 RPGTVALREIRHFQKTWKLLIPAAPFIRIVKEVTAGF 280
RPGTVALREIR FQKTW LLIPAAPFIR+VKE++ F
Sbjct: 61 RPGTVALREIRRFQKTWNLLIPAAPFIRLVKEISYFF 97
>ref|XP_006339687.1| PREDICTED: histone H3-like centromeric protein HTR12-like [Solanum
tuberosum]
Length = 147
Score = 80.9 bits (198), Expect = 2e-13
Identities = 44/90 (48%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Frame = +2
Query: 29 MARSKHFDTKXXXXXXXXGPTSEPSAGASTPSR------PSSTPKVRRKPHRYRPGTVAL 190
MAR+KH + + PSA STP+R P+++ + ++ RYRPGTVAL
Sbjct: 1 MARTKHLAKRSRTKPSV---AAGPSATPSTPTRKSPRSAPATSVQKPKQKKRYRPGTVAL 57
Query: 191 REIRHFQKTWKLLIPAAPFIRIVKEVTAGF 280
REIRHFQKTW L+IPAAPFIR+V+E++ F
Sbjct: 58 REIRHFQKTWNLVIPAAPFIRLVREISHFF 87
>dbj|BAO51831.1| centromere specific histone H3 [Torenia fournieri]
gi|586941101|dbj|BAO51832.1| centromere specific histone
H3 [Torenia baillonii]
Length = 152
Score = 77.8 bits (190), Expect = 1e-12
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Frame = +2
Query: 29 MARSKHFDTKXXXXXXXXGPTSEPSAGASTPSRPSSTPKVRRKP--------HRYRPGTV 184
MAR+KH K GP P A + PS S +R P R RPGTV
Sbjct: 1 MARTKHPVRKGPHRKSSGGPAVRPQAAEADPSTSSRKSYAKRTPPTGGDRKQRRNRPGTV 60
Query: 185 ALREIRHFQKTWKLLIPAAPFIRIVKEVT 271
ALREIR +QK+W LLIPAAPFIR+VKE++
Sbjct: 61 ALREIRKYQKSWMLLIPAAPFIRVVKEIS 89
>ref|XP_002281073.1| PREDICTED: histone H3-like centromeric protein HTR12 [Vitis
vinifera] gi|297745416|emb|CBI40496.3| unnamed protein
product [Vitis vinifera]
Length = 156
Score = 75.9 bits (185), Expect = 6e-12
Identities = 48/96 (50%), Positives = 56/96 (58%), Gaps = 12/96 (12%)
Frame = +2
Query: 29 MARSKHFDTKXXXXXXXXG--PTSEPSAGAST--PSRPSSTP--------KVRRKPHRYR 172
M R+KH K P S SAG S+ P RP+ T + +RKP RYR
Sbjct: 1 MTRTKHLARKSRNRRRQFAATPASPASAGPSSAPPRRPTRTATDASPTGSQGQRKPFRYR 60
Query: 173 PGTVALREIRHFQKTWKLLIPAAPFIRIVKEVTAGF 280
PGTVALREIR FQKT LLIPAAPFIR V+E++ F
Sbjct: 61 PGTVALREIRRFQKTTHLLIPAAPFIRTVREISYFF 96
>ref|NP_001055894.1| Os05g0489800 [Oryza sativa Japonica Group]
gi|40365140|gb|AAR85315.1| centromeric histone 3 [Oryza
sativa Japonica Group] gi|50511368|gb|AAT77291.1|
histone H3 [Oryza sativa Japonica Group]
gi|113579445|dbj|BAF17808.1| Os05g0489800 [Oryza sativa
Japonica Group] gi|218197012|gb|EEC79439.1| hypothetical
protein OsI_20419 [Oryza sativa Indica Group]
gi|222632049|gb|EEE64181.1| hypothetical protein
OsJ_19013 [Oryza sativa Japonica Group]
Length = 164
Score = 73.9 bits (180), Expect = 2e-11
Identities = 37/61 (60%), Positives = 45/61 (73%)
Frame = +2
Query: 89 TSEPSAGASTPSRPSSTPKVRRKPHRYRPGTVALREIRHFQKTWKLLIPAAPFIRIVKEV 268
T+ +AG S P K +RKPHR+RPGTVALREIR FQKT +LLIP APF R+V+E+
Sbjct: 43 TTRSAAGTSASGTPRQQTK-QRKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREI 101
Query: 269 T 271
T
Sbjct: 102 T 102
>gb|ADN92700.1| centromere-specific H3 variant protein [Brassica oleracea]
gi|307751424|gb|ADN92704.1| centromere-specific H3
variant protein [Brassica carinata]
Length = 148
Score = 73.6 bits (179), Expect = 3e-11
Identities = 46/93 (49%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Frame = +2
Query: 17 SGTPMARSKHFDTKXXXXXXXXGPTSEPSAG---ASTPSRPSSTPKV--RRKPHRYRPGT 181
S TP R D PT+ PSAG T + PK ++K RY+PGT
Sbjct: 23 SATPTRREGSQDEGGEAQQSAATPTTTPSAGRKKGGTKRTKQAMPKSSNKKKTFRYKPGT 82
Query: 182 VALREIRHFQKTWKLLIPAAPFIRIVKEVTAGF 280
VALREIRHFQKT KLLIPAA FIR V+ VT F
Sbjct: 83 VALREIRHFQKTTKLLIPAASFIRQVRSVTQIF 115
>ref|XP_007219168.1| hypothetical protein PRUPE_ppa016454mg, partial [Prunus persica]
gi|462415630|gb|EMJ20367.1| hypothetical protein
PRUPE_ppa016454mg, partial [Prunus persica]
Length = 123
Score = 73.2 bits (178), Expect = 4e-11
Identities = 37/59 (62%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Frame = +2
Query: 107 GASTPSRPS----STPKVRRKPHRYRPGTVALREIRHFQKTWKLLIPAAPFIRIVKEVT 271
G RP +TP+ +RK R+RPGTVALREIRHFQKT LLIPAAPFIR V+EV+
Sbjct: 2 GTQKKKRPQRNAPTTPETQRKKRRFRPGTVALREIRHFQKTCSLLIPAAPFIRAVREVS 60
>dbj|BAF49717.1| putative centromeric histone H3-like protein_1 [Olimarabidopsis
pumila]
Length = 173
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 21/85 (24%)
Frame = +2
Query: 83 GPTSEPSAGASTPSRPSSTPKV---------------------RRKPHRYRPGTVALREI 199
GP++ P+AG S + +TP ++KP+RY+PGTVALREI
Sbjct: 26 GPSTNPTAGGSEDAAQQTTPTTSPATGSKKRAKRARQAMPRGSQKKPYRYKPGTVALREI 85
Query: 200 RHFQKTWKLLIPAAPFIRIVKEVTA 274
RHFQKT LL+PAAPFIR V+ +++
Sbjct: 86 RHFQKTTSLLLPAAPFIRQVRSISS 110
>gb|AAT96389.1| centromeric histone [Olimarabidopsis pumila]
gi|134152505|dbj|BAF49718.1| putative centromeric
histone H3-like protein_2 [Olimarabidopsis pumila]
Length = 174
Score = 72.4 bits (176), Expect = 6e-11
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 21/105 (20%)
Frame = +2
Query: 23 TPMARSKHFDTKXXXXXXXXGPTSEPSAGASTPSRPSSTPKV------------------ 148
T + S+ D GP++ P+AG+S + +TP
Sbjct: 7 TVIKSSRPLDRTDASSSQAAGPSTNPTAGSSGDAAQQTTPTTSPATGSTKRAKRARQAMP 66
Query: 149 ---RRKPHRYRPGTVALREIRHFQKTWKLLIPAAPFIRIVKEVTA 274
++KP+RY+PGTVALREIRHFQKT LIPAAPFIR V+ +++
Sbjct: 67 RGSQKKPYRYKPGTVALREIRHFQKTTSFLIPAAPFIRQVRSISS 111
>dbj|BAF49730.1| centromeric histone H3-like protein-1 [Eruca sativa]
Length = 164
Score = 72.0 bits (175), Expect = 8e-11
Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 21/102 (20%)
Frame = +2
Query: 29 MARSKHFDTKXXXXXXXXGPTSEPSAGASTPSRPSSTPKVR------------------- 151
MAR+KHF ++ S +A A+ + PS+TP R
Sbjct: 1 MARTKHFASRARDRNRNNATASSSAAAAA--AGPSATPTRRGSRQGGGGGGGVEAQQGSN 58
Query: 152 --RKPHRYRPGTVALREIRHFQKTWKLLIPAAPFIRIVKEVT 271
+K RY+PGTVALREIRHFQKT KLLIPAA FIR+V+ +T
Sbjct: 59 KKKKSFRYKPGTVALREIRHFQKTTKLLIPAATFIRLVRSIT 100
>gb|ABE27638.1| histone H3 [Arabidopsis lyrata subsp. petraea]
gi|91178271|gb|ABE27642.1| histone H3 [Arabidopsis
lyrata subsp. petraea]
Length = 166
Score = 72.0 bits (175), Expect = 8e-11
Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 21/102 (20%)
Frame = +2
Query: 29 MARSKHFDTKXXXXXXXXG-------------------PTSEPSAGASTPSRP-SSTPK- 145
MAR+KHF TK PT+ P+ G P R + P+
Sbjct: 1 MARTKHFATKSRSDANASSSQAAGPTTVRHRWRCQQTNPTTSPATGGRRPRRARQAMPRG 60
Query: 146 VRRKPHRYRPGTVALREIRHFQKTWKLLIPAAPFIRIVKEVT 271
++KP+RY+PGTVALREIRHFQK LLIPAA FIR V+ +T
Sbjct: 61 SQKKPYRYKPGTVALREIRHFQKQTNLLIPAASFIRQVRSIT 102
>gb|AAT96392.1| centromeric histone [Arabidopsis lyrata]
Length = 176
Score = 72.0 bits (175), Expect = 8e-11
Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Frame = +2
Query: 86 PTSEPSAGASTPSRP-SSTPKV-RRKPHRYRPGTVALREIRHFQKTWKLLIPAAPFIRIV 259
PT+ P+ G P R + P+V + KP+RY+PGTVALREIRHFQK LLIPAA FIR V
Sbjct: 49 PTTSPATGGRRPRRARQAMPRVSQNKPYRYKPGTVALREIRHFQKQTNLLIPAASFIRQV 108
Query: 260 KEVT 271
+ +T
Sbjct: 109 RSIT 112
>gb|ACX30894.1| CENH3 [Oryza punctata] gi|260072761|gb|ACX30896.1| CENH3 [Oryza
punctata]
Length = 166
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 101 SAGASTPSRPSSTPKVRRKPHRYRPGTVALREIRHFQKTWKLLIPAAPFIRIVKEVT 271
+AG S P K++RKPHR+RPGTVALREIR FQ+T +LLIP APF R+V+E+T
Sbjct: 49 AAGTSAAGTPRQQ-KMQRKPHRFRPGTVALREIRKFQRTTELLIPFAPFSRLVREIT 104
>gb|ACX30891.1| CENH3 [Oryza minuta] gi|260072763|gb|ACX30897.1| CENH3 [Oryza
minuta]
Length = 166
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 101 SAGASTPSRPSSTPKVRRKPHRYRPGTVALREIRHFQKTWKLLIPAAPFIRIVKEVT 271
+AG S P K++RKPHR+RPGTVALREIR FQ+T +LLIP APF R+V+E+T
Sbjct: 49 AAGTSAAGTPRQQ-KMQRKPHRFRPGTVALREIRKFQRTTELLIPFAPFSRLVREIT 104
>dbj|BAF63140.1| centromeric histone H3-like protein_1 [Arabidopsis suecica]
Length = 176
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Frame = +2
Query: 86 PTSEPSAGASTPSRP-SSTPK-VRRKPHRYRPGTVALREIRHFQKTWKLLIPAAPFIRIV 259
PT+ P+ G P R + P+ ++KP+RYRPGTVALREIRHFQK LLIPAA FIR V
Sbjct: 49 PTTSPATGGRRPRRARQAMPRGSQKKPYRYRPGTVALREIRHFQKQTNLLIPAASFIRQV 108
Query: 260 KEVT 271
+ +T
Sbjct: 109 RSIT 112
>gb|ABE27637.1| histone H3 [Arabidopsis lyrata subsp. petraea]
gi|91178275|gb|ABE27644.1| histone H3 [Arabidopsis
lyrata subsp. petraea] gi|91178281|gb|ABE27647.1|
histone H3 [Arabidopsis lyrata subsp. petraea]
gi|91178291|gb|ABE27652.1| histone H3 [Arabidopsis
lyrata subsp. petraea]
Length = 172
Score = 71.6 bits (174), Expect = 1e-10
Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +2
Query: 5 SLSLSGTPMARSKHFDTKXXXXXXXXGPTSEPSAGASTPSRP-SSTPK-VRRKPHRYRPG 178
S S + P S T+ PT+ P+ G P R + P+ ++KP+RY+PG
Sbjct: 18 SSSQAAGPTTTSTTRGTEGGDNTQQTNPTTSPATGGRRPRRARQAMPRGSQKKPYRYKPG 77
Query: 179 TVALREIRHFQKTWKLLIPAAPFIRIVKEVT 271
TVALREIRHFQK LLIPAA FIR V+ +T
Sbjct: 78 TVALREIRHFQKQTNLLIPAASFIRQVRSIT 108
>gb|ADN92701.1| centromere-specific H3 variant protein [Brassica oleracea]
gi|307751422|gb|ADN92703.1| centromere-specific H3
variant protein [Brassica carinata]
Length = 147
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/70 (58%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Frame = +2
Query: 86 PTSEPSAG---ASTPSRPSSTPKV--RRKPHRYRPGTVALREIRHFQKTWKLLIPAAPFI 250
PT+ PSAG T + PK ++K RY+PGTVALREIRHFQKT KLLIPAA FI
Sbjct: 45 PTTTPSAGRKKGGTKRTKQAMPKSSNKKKTFRYKPGTVALREIRHFQKTTKLLIPAASFI 104
Query: 251 RIVKEVTAGF 280
R V+ VT F
Sbjct: 105 RQVRSVTQIF 114
>gb|ADB03182.1| centromeric histone H3 [Hordeum bulbosum]
Length = 155
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/58 (60%), Positives = 41/58 (70%)
Frame = +2
Query: 98 PSAGASTPSRPSSTPKVRRKPHRYRPGTVALREIRHFQKTWKLLIPAAPFIRIVKEVT 271
P+A P P +RKPHRYRPGTVALREIR +QK+ LIP APF+R+VKEVT
Sbjct: 50 PAADQGAPGEPK-----KRKPHRYRPGTVALREIRKYQKSVDFLIPFAPFVRLVKEVT 102
>dbj|BAF63142.1| centromeric histone H3-like protein [Brassica oleracea var.
italica] gi|148356919|dbj|BAF63143.1| centromeric
histone H3-like protein [Brassica oleracea var.
capitata] gi|268376518|gb|ACZ04979.1|
centromere-specific H3 variant protein [Brassica
oleracea] gi|268376524|gb|ACZ04982.1|
centromere-specific H3 variant protein [Brassica
carinata]
Length = 184
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/70 (58%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Frame = +2
Query: 86 PTSEPSAG---ASTPSRPSSTPKV--RRKPHRYRPGTVALREIRHFQKTWKLLIPAAPFI 250
PT+ PSAG T + PK ++K RY+PGTVALREIRHFQKT KLLIPAA FI
Sbjct: 54 PTTTPSAGRKKGGTKRTKQAMPKSSNKKKTFRYKPGTVALREIRHFQKTTKLLIPAASFI 113
Query: 251 RIVKEVTAGF 280
R V+ VT F
Sbjct: 114 RQVRSVTQIF 123