BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00025476
         (722 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   358   1e-96
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              358   1e-96
ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mit...   354   2e-95
ref|XP_007209989.1| hypothetical protein PRUPE_ppa005240mg [Prun...   352   6e-95
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [...   352   6e-95
ref|XP_006601251.1| PREDICTED: RNA pseudouridine synthase 3, mit...   352   7e-95
ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mit...   352   7e-95
ref|XP_007160970.1| hypothetical protein PHAVU_001G032500g [Phas...   351   2e-94
ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   351   2e-94
ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citr...   350   3e-94
ref|XP_006436405.1| hypothetical protein CICLE_v10031422mg [Citr...   350   3e-94
ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutr...   348   1e-93
gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]           347   2e-93
ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   347   2e-93
ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   347   2e-93
gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]           346   5e-93
ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mit...   345   9e-93
ref|XP_007023655.1| Pseudouridine synthase family protein [Theob...   344   2e-92
dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]        343   3e-92
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian...   343   3e-92

>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
           vinifera]
          Length = 479

 Score =  358 bits (919), Expect = 1e-96
 Identities = 170/212 (80%), Positives = 189/212 (89%), Gaps = 3/212 (1%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           WDDAC AT QRYWALVIGSP++K+GVI APLSKVLL+DGKTER+I+A+ SG+EASQEAIT
Sbjct: 268 WDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDDGKTERVILANQSGLEASQEAIT 327

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           EYRVLGP INGCSWIEL P T RKHQLRVHCAEALGTPIVGDYKYGW+VH +WKQMPRVD
Sbjct: 328 EYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVD 387

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVKNS-- 188
           +EPT+GKPYKMRRPEGLDVQKGSVLSKVPLLHLHCREL+LPNIAKFL +L   P   +  
Sbjct: 388 LEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQY 447

Query: 187 -SVASKRDVLRFVAPMPSHMKISWNLMSSYLV 95
             ++ K D+LRFVA MP+HMKISWNLMSSYLV
Sbjct: 448 PKLSLKPDILRFVASMPNHMKISWNLMSSYLV 479


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  358 bits (919), Expect = 1e-96
 Identities = 170/212 (80%), Positives = 189/212 (89%), Gaps = 3/212 (1%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           WDDAC AT QRYWALVIGSP++K+GVI APLSKVLL+DGKTER+I+A+ SG+EASQEAIT
Sbjct: 270 WDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDDGKTERVILANQSGLEASQEAIT 329

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           EYRVLGP INGCSWIEL P T RKHQLRVHCAEALGTPIVGDYKYGW+VH +WKQMPRVD
Sbjct: 330 EYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVD 389

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVKNS-- 188
           +EPT+GKPYKMRRPEGLDVQKGSVLSKVPLLHLHCREL+LPNIAKFL +L   P   +  
Sbjct: 390 LEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQY 449

Query: 187 -SVASKRDVLRFVAPMPSHMKISWNLMSSYLV 95
             ++ K D+LRFVA MP+HMKISWNLMSSYLV
Sbjct: 450 PKLSLKPDILRFVASMPNHMKISWNLMSSYLV 481


>ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like [Citrus
           sinensis]
          Length = 471

 Score =  354 bits (908), Expect = 2e-95
 Identities = 173/213 (81%), Positives = 187/213 (87%), Gaps = 4/213 (1%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           W+DAC A  QRYWALVIGSPREKQG+IRAPLSKVLL+DGKTERII+A  SG+EASQEA+T
Sbjct: 259 WNDACEAMYQRYWALVIGSPREKQGIIRAPLSKVLLDDGKTERIILAQNSGLEASQEAMT 318

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           EYRVLGP INGCSWIEL PLT RKHQLRVHCAEALGTPIVGDYKYGW+VH +WKQMPRVD
Sbjct: 319 EYRVLGPMINGCSWIELRPLTCRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVD 378

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVKNSSV 182
           IEPTSGKPYK+RRP+GLDVQKGSVLSKVPLLHLHCRELVLPNIAKF+ VL +        
Sbjct: 379 IEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFINVLNQKSDNLFPT 438

Query: 181 ASKR----DVLRFVAPMPSHMKISWNLMSSYLV 95
            S +    D+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 439 LSSKPDGPDLLRFVASMPSHMKISWNLMSSYLV 471


>ref|XP_007209989.1| hypothetical protein PRUPE_ppa005240mg [Prunus persica]
           gi|462405724|gb|EMJ11188.1| hypothetical protein
           PRUPE_ppa005240mg [Prunus persica]
          Length = 471

 Score =  352 bits (904), Expect = 6e-95
 Identities = 169/210 (80%), Positives = 189/210 (90%), Gaps = 1/210 (0%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           WDDAC A  QRYWALVIGSP+EK+G+I APLSKVLL++GKTER+I+AH SG+EASQ+AIT
Sbjct: 262 WDDACEARYQRYWALVIGSPKEKEGLICAPLSKVLLDNGKTERVILAHQSGLEASQKAIT 321

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           +YRVLGPTINGCSWIEL PLT RKHQLRVHCAEALGTPIVGDYKYGW+VH +WKQMP VD
Sbjct: 322 QYRVLGPTINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPHVD 381

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEG-PVKNSS 185
           +EPTSG PYK+RRP GLDVQKGSVLSKVPLLHLHCRELVLPNIAKFL +L +     + +
Sbjct: 382 VEPTSGLPYKLRRPAGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLLILDQKLDSLHPA 441

Query: 184 VASKRDVLRFVAPMPSHMKISWNLMSSYLV 95
           V+SK D+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 442 VSSKPDILRFVASMPSHMKISWNLMSSYLV 471


>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 468

 Score =  352 bits (904), Expect = 6e-95
 Identities = 170/210 (80%), Positives = 187/210 (89%), Gaps = 1/210 (0%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           W+DAC AT QRYWALVIGSP+EK+G+IRAPLSKVLLNDGKTER+++A  SG+EASQEA+T
Sbjct: 259 WNDACKATYQRYWALVIGSPKEKEGLIRAPLSKVLLNDGKTERVVLAQHSGLEASQEALT 318

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           EYRVLGP INGCSWIEL PLT RKHQLRVHCAEALGTPIVGDYKYGW VH +WKQMPRVD
Sbjct: 319 EYRVLGPRINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWCVHQRWKQMPRVD 378

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVK-NSS 185
           IEP SGKPYK+RRP GLDVQKGSVLSKVPLLHLHCRE VLPNIAKFL VL E     + +
Sbjct: 379 IEPFSGKPYKLRRPAGLDVQKGSVLSKVPLLHLHCREFVLPNIAKFLAVLNEKSENIHPA 438

Query: 184 VASKRDVLRFVAPMPSHMKISWNLMSSYLV 95
           + +K D+LRFVA MP+HMKISWNLMSSYLV
Sbjct: 439 LDAKPDLLRFVASMPTHMKISWNLMSSYLV 468


>ref|XP_006601251.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X2 [Glycine max]
          Length = 449

 Score =  352 bits (903), Expect = 7e-95
 Identities = 167/210 (79%), Positives = 186/210 (88%), Gaps = 1/210 (0%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           W++AC AT QRYWALVIG+P+EK+G+I APLSKVLLNDGKTERII+AH S VE  QEA+T
Sbjct: 240 WNEACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERIILAHHSSVEPRQEAVT 299

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           EYRVLGP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGDYKYGW+VH +WKQMPRVD
Sbjct: 300 EYRVLGPQINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVD 359

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVK-NSS 185
           IEPT+GKPYK+RRPEGLDVQKGSVLSKVPLLHLHCRELVLPNI KF+ VL     +  +S
Sbjct: 360 IEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIVKFMHVLNNSSEELRTS 419

Query: 184 VASKRDVLRFVAPMPSHMKISWNLMSSYLV 95
           +  + DVLRFVA MPSHM+ISWNLMSSYLV
Sbjct: 420 LREQPDVLRFVATMPSHMRISWNLMSSYLV 449


>ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X1 [Glycine max]
          Length = 476

 Score =  352 bits (903), Expect = 7e-95
 Identities = 167/210 (79%), Positives = 186/210 (88%), Gaps = 1/210 (0%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           W++AC AT QRYWALVIG+P+EK+G+I APLSKVLLNDGKTERII+AH S VE  QEA+T
Sbjct: 267 WNEACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERIILAHHSSVEPRQEAVT 326

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           EYRVLGP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGDYKYGW+VH +WKQMPRVD
Sbjct: 327 EYRVLGPQINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVD 386

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVK-NSS 185
           IEPT+GKPYK+RRPEGLDVQKGSVLSKVPLLHLHCRELVLPNI KF+ VL     +  +S
Sbjct: 387 IEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIVKFMHVLNNSSEELRTS 446

Query: 184 VASKRDVLRFVAPMPSHMKISWNLMSSYLV 95
           +  + DVLRFVA MPSHM+ISWNLMSSYLV
Sbjct: 447 LREQPDVLRFVATMPSHMRISWNLMSSYLV 476


>ref|XP_007160970.1| hypothetical protein PHAVU_001G032500g [Phaseolus vulgaris]
           gi|561034434|gb|ESW32964.1| hypothetical protein
           PHAVU_001G032500g [Phaseolus vulgaris]
          Length = 480

 Score =  351 bits (900), Expect = 2e-94
 Identities = 167/210 (79%), Positives = 188/210 (89%), Gaps = 1/210 (0%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           W+DAC AT QRYWALVIG+P+EK+G+I APLSKVLLNDGKTERII+A+ S VE  QEA+T
Sbjct: 271 WNDACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERIILANHSSVEPRQEAVT 330

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           E+RVLGP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGDYKYGW+VH +WKQMPR+D
Sbjct: 331 EFRVLGPKINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRID 390

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVK-NSS 185
           IEPT+GKPYK+RRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFL VL     + +SS
Sbjct: 391 IEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLHVLNNSSEELHSS 450

Query: 184 VASKRDVLRFVAPMPSHMKISWNLMSSYLV 95
           +  + +VLRFVA MPSHM+ISWNLMSSYLV
Sbjct: 451 LNQQPEVLRFVATMPSHMRISWNLMSSYLV 480


>ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like isoform
           X1 [Cicer arietinum]
          Length = 479

 Score =  351 bits (900), Expect = 2e-94
 Identities = 165/210 (78%), Positives = 188/210 (89%), Gaps = 1/210 (0%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           W+DAC +T QRYWALVIG+P+EK+G+I APLSKVLLNDGKTER+I+AH S +E  QEA+T
Sbjct: 270 WNDACESTYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERVILAHESSIEPHQEAVT 329

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           EYRVLGP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGDYKYGW+VH +WKQMPRVD
Sbjct: 330 EYRVLGPKINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVD 389

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVK-NSS 185
           IEPT+GKPYK+RRPEGLDVQKGSVLSKVPLLHLHCREL LPNIAKFL VL +   + + S
Sbjct: 390 IEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELALPNIAKFLNVLEKSSQQLDPS 449

Query: 184 VASKRDVLRFVAPMPSHMKISWNLMSSYLV 95
           ++ + DVLRFVA MP+HM+ISWNLMSSYLV
Sbjct: 450 LSLQPDVLRFVATMPNHMRISWNLMSSYLV 479


>ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
           gi|557538602|gb|ESR49646.1| hypothetical protein
           CICLE_v10031422mg [Citrus clementina]
          Length = 471

 Score =  350 bits (898), Expect = 3e-94
 Identities = 171/213 (80%), Positives = 185/213 (86%), Gaps = 4/213 (1%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           W+DAC A  QRYWALVIGSP+EKQG+I APLSKVLL+DGKTERII+A  SG+EASQEA+T
Sbjct: 259 WNDACEAMYQRYWALVIGSPKEKQGIIHAPLSKVLLDDGKTERIILAQNSGLEASQEAVT 318

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           EYRVLGP INGCSWIEL PLT RKHQLRVHCAEALGTPIVGDYKYGW+VH +WKQMPRVD
Sbjct: 319 EYRVLGPMINGCSWIELRPLTCRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVD 378

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVKNSSV 182
           IEPTSGKPYK+RRP+GLDVQKGSVLSKVPLLHLHCRELVLPNIAKF  VL +        
Sbjct: 379 IEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFRNVLNQKSDNLFPT 438

Query: 181 ASKR----DVLRFVAPMPSHMKISWNLMSSYLV 95
            S +    D+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 439 LSSKPDGPDLLRFVASMPSHMKISWNLMSSYLV 471


>ref|XP_006436405.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
           gi|557538601|gb|ESR49645.1| hypothetical protein
           CICLE_v10031422mg [Citrus clementina]
          Length = 343

 Score =  350 bits (898), Expect = 3e-94
 Identities = 171/213 (80%), Positives = 185/213 (86%), Gaps = 4/213 (1%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           W+DAC A  QRYWALVIGSP+EKQG+I APLSKVLL+DGKTERII+A  SG+EASQEA+T
Sbjct: 131 WNDACEAMYQRYWALVIGSPKEKQGIIHAPLSKVLLDDGKTERIILAQNSGLEASQEAVT 190

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           EYRVLGP INGCSWIEL PLT RKHQLRVHCAEALGTPIVGDYKYGW+VH +WKQMPRVD
Sbjct: 191 EYRVLGPMINGCSWIELRPLTCRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVD 250

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVKNSSV 182
           IEPTSGKPYK+RRP+GLDVQKGSVLSKVPLLHLHCRELVLPNIAKF  VL +        
Sbjct: 251 IEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFRNVLNQKSDNLFPT 310

Query: 181 ASKR----DVLRFVAPMPSHMKISWNLMSSYLV 95
            S +    D+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 311 LSSKPDGPDLLRFVASMPSHMKISWNLMSSYLV 343


>ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutrema salsugineum]
           gi|557086377|gb|ESQ27229.1| hypothetical protein
           EUTSA_v10018480mg [Eutrema salsugineum]
          Length = 478

 Score =  348 bits (892), Expect = 1e-93
 Identities = 164/211 (77%), Positives = 186/211 (88%), Gaps = 2/211 (0%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           W+ AC A  Q+YWALVIGSP++K+GVI AP+SKVLL+DGKT+R+++A  SG EASQEAIT
Sbjct: 268 WNKACEAMYQQYWALVIGSPKDKEGVISAPISKVLLDDGKTDRVVLARGSGFEASQEAIT 327

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           EYRVLGP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGDYKYGW+VH KWKQMP+VD
Sbjct: 328 EYRVLGPMINGCSWLELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHKKWKQMPQVD 387

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVK--NS 188
           IEPTSGKPYK+RRPEGLD+QKGSVLSKVPLLHLHCRE+VLPNIAKFL VL    +   + 
Sbjct: 388 IEPTSGKPYKLRRPEGLDIQKGSVLSKVPLLHLHCREMVLPNIAKFLHVLNNQEIDSLHP 447

Query: 187 SVASKRDVLRFVAPMPSHMKISWNLMSSYLV 95
            + SK D+LRFVA MPSHMKISWN+MSSYLV
Sbjct: 448 GIISKPDLLRFVASMPSHMKISWNIMSSYLV 478


>gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]
          Length = 449

 Score =  347 bits (891), Expect = 2e-93
 Identities = 165/210 (78%), Positives = 188/210 (89%), Gaps = 1/210 (0%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           W+DAC A  Q+YWALVIGSP+EK+G+I APLSKVLLNDGKTER+I+AH +G +ASQEAIT
Sbjct: 240 WNDACEAKYQKYWALVIGSPKEKEGIICAPLSKVLLNDGKTERVILAHQTGFQASQEAIT 299

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           EYRVLGP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGDYKYGW+VH +WKQMP+V+
Sbjct: 300 EYRVLGPMINGCSWLELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVN 359

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLG-EGPVKNSS 185
           IEPT+GKPYK+RRPEGLDVQKGSV+SKVPLLHL CRELVLPNIAKFL V   +   ++ +
Sbjct: 360 IEPTTGKPYKLRRPEGLDVQKGSVMSKVPLLHLQCRELVLPNIAKFLRVFDRKSQNQDPA 419

Query: 184 VASKRDVLRFVAPMPSHMKISWNLMSSYLV 95
           + SK D+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 420 LESKPDLLRFVARMPSHMKISWNLMSSYLV 449


>ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  347 bits (891), Expect = 2e-93
 Identities = 168/211 (79%), Positives = 189/211 (89%), Gaps = 2/211 (0%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           W++AC AT Q+YWALVIG PRE++GVI APLSKVLL+DGKTER+I+A+ + +EASQEAIT
Sbjct: 263 WEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDDGKTERVILANKASIEASQEAIT 322

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           EYRVLGPTINGCSWIEL P T RKHQLR+HCAEALGTPIVGDYKYGW+VH +WKQMPRVD
Sbjct: 323 EYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTPIVGDYKYGWFVHRRWKQMPRVD 382

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVL-GEGPVKNSS 185
           +EP SG+PYK+RRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFL V  G+GP  N  
Sbjct: 383 VEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLNVFYGKGP--NRP 440

Query: 184 VAS-KRDVLRFVAPMPSHMKISWNLMSSYLV 95
           V+S   D+LRFVA MPSHM+ISWNLMSSYLV
Sbjct: 441 VSSFDSDLLRFVARMPSHMRISWNLMSSYLV 471


>ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  347 bits (890), Expect = 2e-93
 Identities = 167/211 (79%), Positives = 189/211 (89%), Gaps = 2/211 (0%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           W++AC AT Q+YWALVIG PRE++GVI APLSKVLL+DGKTER+++A+ + +EASQEAIT
Sbjct: 263 WEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDDGKTERVVLANKASIEASQEAIT 322

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           EYRVLGPTINGCSWIEL P T RKHQLR+HCAEALGTPIVGDYKYGW+VH +WKQMPRVD
Sbjct: 323 EYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTPIVGDYKYGWFVHRRWKQMPRVD 382

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVL-GEGPVKNSS 185
           +EP SG+PYK+RRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFL V  G+GP  N  
Sbjct: 383 VEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLNVFYGKGP--NRP 440

Query: 184 VAS-KRDVLRFVAPMPSHMKISWNLMSSYLV 95
           V+S   D+LRFVA MPSHM+ISWNLMSSYLV
Sbjct: 441 VSSFDSDLLRFVARMPSHMRISWNLMSSYLV 471


>gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]
          Length = 449

 Score =  346 bits (887), Expect = 5e-93
 Identities = 165/210 (78%), Positives = 187/210 (89%), Gaps = 1/210 (0%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           W+DAC A  Q+YWALVIGSP+EK+G+I APLSKVLLNDGKTER+I+AH +G +ASQEAIT
Sbjct: 240 WNDACEAKYQKYWALVIGSPKEKEGIICAPLSKVLLNDGKTERVILAHQTGFQASQEAIT 299

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           EYRVLGP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGDYKYGW VH +WKQMP+V+
Sbjct: 300 EYRVLGPMINGCSWLELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWLVHKRWKQMPQVN 359

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLG-EGPVKNSS 185
           IEPT+GKPYK+RRPEGLDVQKGSV+SKVPLLHL CRELVLPNIAKFL V   +   ++ +
Sbjct: 360 IEPTTGKPYKLRRPEGLDVQKGSVMSKVPLLHLQCRELVLPNIAKFLRVFDRKSENQDPA 419

Query: 184 VASKRDVLRFVAPMPSHMKISWNLMSSYLV 95
           + SK D+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 420 LESKPDLLRFVARMPSHMKISWNLMSSYLV 449


>ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X1 [Solanum tuberosum] gi|565374397|ref|XP_006353750.1|
           PREDICTED: RNA pseudouridine synthase 3,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565374399|ref|XP_006353751.1| PREDICTED: RNA
           pseudouridine synthase 3, mitochondrial-like isoform X3
           [Solanum tuberosum]
          Length = 475

 Score =  345 bits (885), Expect = 9e-93
 Identities = 160/209 (76%), Positives = 186/209 (88%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           W+DAC +T QRYWALVIGSP+EK+GVI APL+KVLL+DG+TER+++A  SG+EAS EA+T
Sbjct: 267 WNDACGSTYQRYWALVIGSPKEKEGVISAPLTKVLLDDGRTERVMLAQQSGLEASDEAVT 326

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           EYR+LGP INGCSWIEL P T RKHQ+RVHCAEALGTPIVGDYKYGW+VH KWKQMPRVD
Sbjct: 327 EYRLLGPMINGCSWIELRPHTSRKHQIRVHCAEALGTPIVGDYKYGWFVHRKWKQMPRVD 386

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVKNSSV 182
           +EPT+GKPY+++RPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKF+E+      K+S  
Sbjct: 387 VEPTTGKPYRLKRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFIELHSRKTKKHSDY 446

Query: 181 ASKRDVLRFVAPMPSHMKISWNLMSSYLV 95
           +SK D+LRFVAPMPS MKISW LMSS L+
Sbjct: 447 SSKPDLLRFVAPMPSPMKISWKLMSSCLI 475


>ref|XP_007023655.1| Pseudouridine synthase family protein [Theobroma cacao]
           gi|508779021|gb|EOY26277.1| Pseudouridine synthase
           family protein [Theobroma cacao]
          Length = 471

 Score =  344 bits (883), Expect = 2e-92
 Identities = 165/210 (78%), Positives = 185/210 (88%), Gaps = 1/210 (0%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           W+DAC    QR+WALVIG+P+EK+G+I APLSK+LL+DGKTER+I+A   G+EASQEAIT
Sbjct: 262 WNDACDVKYQRFWALVIGTPKEKEGLICAPLSKILLDDGKTERVILAQNVGLEASQEAIT 321

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           EYRVLGP INGCSWIEL PLT RKHQLRVHCAEALGTPIVGDYKYGW+VH +WKQMPRVD
Sbjct: 322 EYRVLGPMINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVD 381

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEG-PVKNSS 185
           IEPT+GKPYK+RRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFL VL +       +
Sbjct: 382 IEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLPVLNKNTETLPPA 441

Query: 184 VASKRDVLRFVAPMPSHMKISWNLMSSYLV 95
           ++ K D+LRFVA MP HMKISWNLMSSYLV
Sbjct: 442 LSMKPDLLRFVATMPKHMKISWNLMSSYLV 471


>dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]
          Length = 326

 Score =  343 bits (881), Expect = 3e-92
 Identities = 160/211 (75%), Positives = 187/211 (88%), Gaps = 2/211 (0%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           W+ AC A  Q+YWALVIGSP+EK+G+I APLSKVLL+DGKT+R+++A  SG EASQ+AIT
Sbjct: 116 WNKACEAMYQQYWALVIGSPKEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQDAIT 175

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           EY+VLGP INGCSW+EL P+T RKHQLRVHCAEALGTPIVGDYKYGW+VH +WKQMP+VD
Sbjct: 176 EYKVLGPKINGCSWVELRPITSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVD 235

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVK--NS 188
           IEPT+GKPYK+RRPEGLDVQKGSVLSKVPLLHLHCRE+VLPNIAKFL V+ +   +  ++
Sbjct: 236 IEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFLHVMNQQETEPLHT 295

Query: 187 SVASKRDVLRFVAPMPSHMKISWNLMSSYLV 95
            +  K D+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 296 GIIDKPDLLRFVASMPSHMKISWNLMSSYLV 326


>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
           gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
           pseudouridine synthase 3, mitochondrial; AltName:
           Full=RNA pseudouridylate synthase 3; AltName:
           Full=RNA-uridine isomerase 3; Flags: Precursor
           gi|53850479|gb|AAU95416.1| At1g78910 [Arabidopsis
           thaliana] gi|56790228|gb|AAW30031.1| At1g78910
           [Arabidopsis thaliana] gi|332198052|gb|AEE36173.1| RNA
           pseudourine synthase 3 [Arabidopsis thaliana]
          Length = 478

 Score =  343 bits (881), Expect = 3e-92
 Identities = 160/211 (75%), Positives = 187/211 (88%), Gaps = 2/211 (0%)
 Frame = -2

Query: 721 WDDACAATAQRYWALVIGSPREKQGVIRAPLSKVLLNDGKTERIIIAHPSGVEASQEAIT 542
           W+ AC A  Q+YWALVIGSP+EK+G+I APLSKVLL+DGKT+R+++A  SG EASQ+AIT
Sbjct: 268 WNKACEAMYQQYWALVIGSPKEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQDAIT 327

Query: 541 EYRVLGPTINGCSWIELYPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVHLKWKQMPRVD 362
           EY+VLGP INGCSW+EL P+T RKHQLRVHCAEALGTPIVGDYKYGW+VH +WKQMP+VD
Sbjct: 328 EYKVLGPKINGCSWVELRPITSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVD 387

Query: 361 IEPTSGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLEVLGEGPVK--NS 188
           IEPT+GKPYK+RRPEGLDVQKGSVLSKVPLLHLHCRE+VLPNIAKFL V+ +   +  ++
Sbjct: 388 IEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFLHVMNQQETEPLHT 447

Query: 187 SVASKRDVLRFVAPMPSHMKISWNLMSSYLV 95
            +  K D+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 448 GIIDKPDLLRFVASMPSHMKISWNLMSSYLV 478