BLASTX nr result
ID: Sinomenium21_contig00025453
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00025453
(647 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containi... 86 3e-33
ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citr... 86 3e-33
gb|EXB41428.1| hypothetical protein L484_007578 [Morus notabilis] 87 3e-32
ref|XP_006450596.1| hypothetical protein CICLE_v10010742mg [Citr... 82 9e-32
ref|XP_006476161.1| PREDICTED: pentatricopeptide repeat-containi... 82 9e-32
ref|XP_006844721.1| hypothetical protein AMTR_s00016p00252780 [A... 88 9e-32
ref|XP_006299486.1| hypothetical protein CARUB_v10015651mg [Caps... 82 6e-31
ref|XP_004230293.1| PREDICTED: pentatricopeptide repeat-containi... 82 6e-31
gb|EYU45574.1| hypothetical protein MIMGU_mgv1a001941mg [Mimulus... 83 7e-31
ref|XP_004292867.1| PREDICTED: pentatricopeptide repeat-containi... 81 1e-30
ref|XP_004287591.1| PREDICTED: pentatricopeptide repeat-containi... 83 1e-30
ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containi... 80 3e-30
ref|XP_002884209.1| pentatricopeptide repeat-containing protein ... 83 4e-30
ref|XP_006408981.1| hypothetical protein EUTSA_v10001958mg [Eutr... 80 4e-30
ref|XP_006475832.1| PREDICTED: pentatricopeptide repeat-containi... 86 5e-30
ref|XP_006344748.1| PREDICTED: pentatricopeptide repeat-containi... 82 5e-30
ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212... 82 8e-30
ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226... 82 8e-30
ref|XP_003603587.1| Pentatricopeptide repeat-containing protein ... 80 8e-30
ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis th... 82 8e-30
>ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Citrus sinensis]
Length = 736
Score = 85.5 bits (210), Expect(2) = 3e-33
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 3/130 (2%)
Frame = -2
Query: 643 YRVFEEQ-IFYLFSIATTFNQLTQIHAQILPLGLHQNNFIATRLINFCSSTSF--ITHAS 473
Y++ + Q L S T + Q+H+QI+ GLH F ++LI C+ + F +++A
Sbjct: 25 YKLLQNQPSLALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYAL 84
Query: 472 LTFHHVSNPTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCATLP 293
L F + P +WN+ IRG S ++ P+ +K Y +M + P+ +TFPF+LKSCA +
Sbjct: 85 LVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKIS 144
Query: 292 PYPPLGRAIH 263
G+ IH
Sbjct: 145 AISE-GKQIH 153
Score = 83.2 bits (204), Expect(2) = 3e-33
Identities = 39/87 (44%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Frame = -3
Query: 255 LRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRK 76
LRD V++ ++I G R ++ R +F+ MP R+VVSWN +IAGY+Q+G+ EAL +F+K
Sbjct: 193 LRDAVSYTALITGYASRGYLDDARQLFDEMPVRDVVSWNAMIAGYAQSGRYEEALAIFQK 252
Query: 75 MQSEGILPNDVMLVSVLSAC--VGAIE 1
++ E +PN+ +V+VLSAC +G++E
Sbjct: 253 IREENFVPNESTVVTVLSACAHMGSLE 279
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/80 (37%), Positives = 49/80 (61%)
Frame = -3
Query: 255 LRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRK 76
L +V W S+I + N++ +F+ M + + SWN +I+G + +G+A +AL LF +
Sbjct: 396 LNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSR 455
Query: 75 MQSEGILPNDVMLVSVLSAC 16
M EG+ P+D+ V VLSAC
Sbjct: 456 MIGEGLQPDDITFVGVLSAC 475
Score = 64.7 bits (156), Expect = 2e-08
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Frame = -3
Query: 234 NSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKMQSEGIL 55
N++I + ++ K RD+F + +R+V+SWN +I GY+ EAL LFR+M I
Sbjct: 301 NALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIE 360
Query: 54 PNDVMLVSVLSAC--VGAIE 1
PNDV +SVL AC +GA++
Sbjct: 361 PNDVTFLSVLPACAYLGALD 380
>ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citrus clementina]
gi|557554208|gb|ESR64222.1| hypothetical protein
CICLE_v10010823mg [Citrus clementina]
Length = 736
Score = 85.5 bits (210), Expect(2) = 3e-33
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 3/130 (2%)
Frame = -2
Query: 643 YRVFEEQ-IFYLFSIATTFNQLTQIHAQILPLGLHQNNFIATRLINFCSSTSF--ITHAS 473
Y++ + Q L S T + Q+H+QI+ GLH F ++LI C+ + F +++A
Sbjct: 25 YKLLQNQPSLALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYAL 84
Query: 472 LTFHHVSNPTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCATLP 293
L F + P +WN+ IRG S ++ P+ +K Y +M + P+ +TFPF+LKSCA +
Sbjct: 85 LVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKIS 144
Query: 292 PYPPLGRAIH 263
G+ IH
Sbjct: 145 AISE-GKQIH 153
Score = 83.2 bits (204), Expect(2) = 3e-33
Identities = 39/87 (44%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Frame = -3
Query: 255 LRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRK 76
LRD V++ ++I G R ++ R +F+ MP R+VVSWN +IAGY+Q+G+ EAL +F+K
Sbjct: 193 LRDAVSYTALITGYASRGYLDDARQLFDEMPVRDVVSWNAMIAGYAQSGRYEEALAIFQK 252
Query: 75 MQSEGILPNDVMLVSVLSAC--VGAIE 1
++ E +PN+ +V+VLSAC +G++E
Sbjct: 253 IREENFVPNESTVVTVLSACAHMGSLE 279
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/80 (37%), Positives = 49/80 (61%)
Frame = -3
Query: 255 LRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRK 76
L +V W S+I + N++ +F+ M + + SWN +I+G + +G+A +AL LF +
Sbjct: 396 LNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSR 455
Query: 75 MQSEGILPNDVMLVSVLSAC 16
M EG+ P+D+ V VLSAC
Sbjct: 456 MIGEGLQPDDITFVGVLSAC 475
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = -3
Query: 192 KGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKMQSEGILPNDVMLVSVLSAC- 16
K RD+F + +R+V+SWN +I GY+ EAL LFR+M I PNDV +SVL AC
Sbjct: 315 KARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACA 374
Query: 15 -VGAIE 1
+GA++
Sbjct: 375 YLGALD 380
>gb|EXB41428.1| hypothetical protein L484_007578 [Morus notabilis]
Length = 428
Score = 87.0 bits (214), Expect(2) = 3e-32
Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 1/129 (0%)
Frame = -2
Query: 646 KYRVFEEQIFYLFSIATTFNQLTQIHAQILPLGLHQNNFIATRLINFCSSTSFITHASLT 467
K + E+ F T+F QL QIHA+I+ GL + + +++ FCS++ + +A+L
Sbjct: 17 KTKFGSEEAFTFLQNCTSFRQLKQIHAKIIRSGLSHDQLLLRKMLQFCSTSGNMDYAALV 76
Query: 466 FHH-VSNPTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCATLPP 290
F H + P WN IR + N P + L + M + PPD FTFPF++K+C
Sbjct: 77 FRHQIPYPLTFTWNLMIRAYTLNASPRQALLLFTLMTSRGFPPDKFTFPFVIKACTASSA 136
Query: 289 YPPLGRAIH 263
+ P G A+H
Sbjct: 137 FRP-GDAVH 144
Score = 78.2 bits (191), Expect(2) = 3e-32
Identities = 35/82 (42%), Positives = 54/82 (65%)
Frame = -3
Query: 261 MPLRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLF 82
M +R++V+W +M+ G ++ R IF +MP +NVVSW +I GY ++ Q EA +LF
Sbjct: 182 MRVRNLVSWTTMVTGLVGSGDLRAARAIFEQMPAKNVVSWTIMIDGYVEDRQPEEAFKLF 241
Query: 81 RKMQSEGILPNDVMLVSVLSAC 16
R+MQ + + PN+ LVS+L AC
Sbjct: 242 RRMQLDNVSPNEFTLVSLLKAC 263
>ref|XP_006450596.1| hypothetical protein CICLE_v10010742mg [Citrus clementina]
gi|557553822|gb|ESR63836.1| hypothetical protein
CICLE_v10010742mg [Citrus clementina]
Length = 605
Score = 82.4 bits (202), Expect(2) = 9e-32
Identities = 38/86 (44%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = -3
Query: 252 RDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKM 73
RD+V WN++I+G R ++K R +F++MP + +VSW +I+GY+ G EAL +FR+M
Sbjct: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYKTIVSWTAMISGYTHIGSYAEALDVFRQM 240
Query: 72 QSEGILPNDVMLVSVLSAC--VGAIE 1
Q GI P+++ +VSVL AC +G++E
Sbjct: 241 QMVGIEPDEISIVSVLPACAQLGSLE 266
Score = 81.3 bits (199), Expect(2) = 9e-32
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Frame = -2
Query: 586 QLTQIHAQILPLGLHQNNFIATRLINFCSSTSFITHASLTFHHVSNPTISLWNSFIRGLS 407
+L +IH QIL L Q+NF+ T++I+ C+S + +ASL F V P + L+N+ IR +
Sbjct: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
Query: 406 QNNLPIETLKTYAQM-----KTAQIPPDNFTFPFLLKSCATLPPYPPLGRAIH 263
N+L + Y QM + I PD FT PF++KSCA L P LG+ IH
Sbjct: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL-LCPSLGKQIH 140
Score = 65.1 bits (157), Expect(2) = 1e-12
Identities = 31/80 (38%), Positives = 51/80 (63%)
Frame = -3
Query: 255 LRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRK 76
LR V N++I + + + +F++M ER+VVSW+TVI G + +G+A +A+ LF +
Sbjct: 281 LRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHE 340
Query: 75 MQSEGILPNDVMLVSVLSAC 16
MQ + PND+ + +LSAC
Sbjct: 341 MQRLKVPPNDITFIGLLSAC 360
Score = 33.9 bits (76), Expect(2) = 1e-12
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = -2
Query: 478 ASLTFHHVSNPTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCAT 299
A + F + TI W + I G + E L + QM+ I PD + +L +CA
Sbjct: 202 ARMLFDKMPYKTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
Query: 298 LPPYPPLGRAIH 263
L LG IH
Sbjct: 262 LGSL-ELGEWIH 272
>ref|XP_006476161.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Citrus sinensis]
Length = 541
Score = 82.4 bits (202), Expect(2) = 9e-32
Identities = 38/86 (44%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = -3
Query: 252 RDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKM 73
RD+V WN++I+G R ++K R +F++MP + +VSW +I+GY+ G EAL +FR+M
Sbjct: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYKTIVSWTAMISGYTHIGSYAEALDVFRQM 240
Query: 72 QSEGILPNDVMLVSVLSAC--VGAIE 1
Q GI P+++ +VSVL AC +G++E
Sbjct: 241 QMVGIEPDEISIVSVLPACAQLGSLE 266
Score = 81.3 bits (199), Expect(2) = 9e-32
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Frame = -2
Query: 586 QLTQIHAQILPLGLHQNNFIATRLINFCSSTSFITHASLTFHHVSNPTISLWNSFIRGLS 407
+L +IH QIL L Q+NF+ T++I+ C+S + +ASL F V P + L+N+ IR +
Sbjct: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
Query: 406 QNNLPIETLKTYAQM-----KTAQIPPDNFTFPFLLKSCATLPPYPPLGRAIH 263
N+L + Y QM + I PD FT PF++KSCA L P LG+ IH
Sbjct: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL-LCPSLGKQIH 140
Score = 65.1 bits (157), Expect(2) = 1e-12
Identities = 31/80 (38%), Positives = 51/80 (63%)
Frame = -3
Query: 255 LRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRK 76
LR V N++I + + + +F++M ER+VVSW+TVI G + +G+A +A+ LF +
Sbjct: 281 LRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHE 340
Query: 75 MQSEGILPNDVMLVSVLSAC 16
MQ + PND+ + +LSAC
Sbjct: 341 MQRLKVPPNDITFIGLLSAC 360
Score = 33.9 bits (76), Expect(2) = 1e-12
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = -2
Query: 478 ASLTFHHVSNPTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCAT 299
A + F + TI W + I G + E L + QM+ I PD + +L +CA
Sbjct: 202 ARMLFDKMPYKTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
Query: 298 LPPYPPLGRAIH 263
L LG IH
Sbjct: 262 LGSL-ELGEWIH 272
>ref|XP_006844721.1| hypothetical protein AMTR_s00016p00252780 [Amborella trichopoda]
gi|548847192|gb|ERN06396.1| hypothetical protein
AMTR_s00016p00252780 [Amborella trichopoda]
Length = 428
Score = 88.2 bits (217), Expect(2) = 9e-32
Identities = 45/121 (37%), Positives = 63/121 (52%)
Frame = -2
Query: 625 QIFYLFSIATTFNQLTQIHAQILPLGLHQNNFIATRLINFCSSTSFITHASLTFHHVSNP 446
Q L +T N L QIHA + GLH++ + T+LIN CS I HA+L F+ + NP
Sbjct: 33 QALSLLQKCSTSNHLLQIHAHLFRTGLHRDYILITKLINLCSIHQKIDHATLVFNQIENP 92
Query: 445 TISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCATLPPYPPLGRAI 266
WN+ IR ++N P E + Y M PD FT+PF++K+C G+ I
Sbjct: 93 LTFTWNTMIRAYFKSNYPEEAILMYNLMVIHGFLPDKFTYPFVIKACVAFSSLEK-GKEI 151
Query: 265 H 263
H
Sbjct: 152 H 152
Score = 75.5 bits (184), Expect(2) = 9e-32
Identities = 35/82 (42%), Positives = 50/82 (60%)
Frame = -3
Query: 261 MPLRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLF 82
M ++ VV+W +M+AG ++ R +F+ MPERNVVSW +I GY +N Q EAL LF
Sbjct: 190 MSVKSVVSWTTMVAGLVSHGDMASARRVFDEMPERNVVSWTAMIHGYVRNNQPHEALELF 249
Query: 81 RKMQSEGILPNDVMLVSVLSAC 16
M + PN+ +VS+L C
Sbjct: 250 ILMLRANVRPNEFTIVSLLLVC 271
Score = 53.1 bits (126), Expect(2) = 6e-11
Identities = 22/63 (34%), Positives = 39/63 (61%)
Frame = -3
Query: 201 NVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKMQSEGILPNDVMLVSVLS 22
++ +++F+ M ER+V +WN++I +G+ EAL +F M+ + P+D+ V VL
Sbjct: 311 SINDAKNVFDGMSERSVATWNSMITSLGVHGKGKEALNVFGAMEKGKVRPDDITFVGVLC 370
Query: 21 ACV 13
ACV
Sbjct: 371 ACV 373
Score = 40.4 bits (93), Expect(2) = 6e-11
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = -2
Query: 478 ASLTFHHVSNPTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCAT 299
A F + + W + I G +NN P E L+ + M A + P+ FT LL C +
Sbjct: 214 ARRVFDEMPERNVVSWTAMIHGYVRNNQPHEALELFILMLRANVRPNEFTIVSLLLVCTS 273
Query: 298 LPPYPPLGRAIHD 260
L LGR +H+
Sbjct: 274 LNSL-RLGRWVHE 285
>ref|XP_006299486.1| hypothetical protein CARUB_v10015651mg [Capsella rubella]
gi|482568195|gb|EOA32384.1| hypothetical protein
CARUB_v10015651mg [Capsella rubella]
Length = 534
Score = 82.0 bits (201), Expect(2) = 6e-31
Identities = 43/111 (38%), Positives = 71/111 (63%), Gaps = 2/111 (1%)
Frame = -2
Query: 589 NQLTQIHAQILPLGLHQNNFIATRLINFCSSTSFITHASLTFHHVSNPTISLWNSFIRGL 410
N+L +IHA I+ GL Q++F+ T++++ C + +A+ F+ VS P + L+NS IR
Sbjct: 24 NELKKIHASIIIHGLSQSSFMVTKMVDSCDKIGDMEYATRLFNQVSYPNVFLYNSIIRAY 83
Query: 409 SQNNLPIETLKTYAQ--MKTAQIPPDNFTFPFLLKSCATLPPYPPLGRAIH 263
+ ++L E ++ Y Q MK+ ++ PD FTFPF+ KSCA+L LG+ +H
Sbjct: 84 THHSLYCEVIRIYRQLFMKSIEL-PDRFTFPFMFKSCASLGSC-YLGKQVH 132
Score = 79.0 bits (193), Expect(2) = 6e-31
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Frame = -3
Query: 252 RDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKM 73
RDV++WNS+++G R ++K + +F MP++ +VSW +I+GYS G EA+ FR+M
Sbjct: 173 RDVISWNSLLSGYARLGQMKKAKALFRLMPDKTIVSWTAMISGYSGIGCYVEAMDFFREM 232
Query: 72 QSEGILPNDVMLVSVLSAC--VGAIE 1
Q GI P+++ L+SVL +C +G++E
Sbjct: 233 QLAGIEPDEISLISVLPSCAHLGSLE 258
Score = 56.2 bits (134), Expect(2) = 5e-11
Identities = 21/61 (34%), Positives = 41/61 (67%)
Frame = -3
Query: 198 VEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKMQSEGILPNDVMLVSVLSA 19
+ + +F++M ++V+SW+T+I+GY+ +G A A+ +F +MQ + PN + + +LSA
Sbjct: 292 ISQAIQLFDQMKRKDVISWSTMISGYAHHGNAHRAIEIFNEMQRAKVKPNGITFLGLLSA 351
Query: 18 C 16
C
Sbjct: 352 C 352
Score = 37.4 bits (85), Expect(2) = 5e-11
Identities = 25/77 (32%), Positives = 36/77 (46%)
Frame = -2
Query: 478 ASLTFHHVSNPTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCAT 299
A F + + TI W + I G S +E + + +M+ A I PD + +L SCA
Sbjct: 194 AKALFRLMPDKTIVSWTAMISGYSGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAH 253
Query: 298 LPPYPPLGRAIHDAFER 248
L LG+ IH ER
Sbjct: 254 LGSL-ELGKWIHMYAER 269
>ref|XP_004230293.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Solanum lycopersicum]
Length = 484
Score = 82.4 bits (202), Expect(2) = 6e-31
Identities = 50/126 (39%), Positives = 69/126 (54%)
Frame = -2
Query: 640 RVFEEQIFYLFSIATTFNQLTQIHAQILPLGLHQNNFIATRLINFCSSTSFITHASLTFH 461
R E +I L T QLTQIHA IL LH +N + + I+ C S + + +AS+ F
Sbjct: 6 REVERRILRLLHGQKTRTQLTQIHAHILRHHLHHSNQLISHFISICGSLNRMRYASIIFQ 65
Query: 460 HVSNPTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCATLPPYPP 281
H NP+I L+NS I+G S ++ ++ MK I PD FTF LLK+CA L
Sbjct: 66 HFQNPSIFLFNSMIKGYSLCGPYQNSVVFFSTMKRRGIWPDEFTFAPLLKACANLVDL-E 124
Query: 280 LGRAIH 263
LG+ +H
Sbjct: 125 LGQGVH 130
Score = 78.6 bits (192), Expect(2) = 6e-31
Identities = 37/82 (45%), Positives = 54/82 (65%)
Frame = -3
Query: 261 MPLRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLF 82
MP RDV+ WN M+ G + NV+ G +F +M ER VVSWN +I+ +QNG+ EAL LF
Sbjct: 168 MPHRDVIIWNLMVKGYSQSGNVDMGLGLFRQMGERTVVSWNLMISLLAQNGREKEALALF 227
Query: 81 RKMQSEGILPNDVMLVSVLSAC 16
+M++ G P++ +V+VL C
Sbjct: 228 HEMKNGGFEPDEATVVTVLPVC 249
Score = 58.9 bits (141), Expect(2) = 5e-12
Identities = 29/76 (38%), Positives = 43/76 (56%)
Frame = -3
Query: 234 NSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKMQSEGIL 55
N+++ + ++E IFN MP +NVVSWN I+ + NG+ ++LF KM EG+
Sbjct: 279 NALVDFFGKSGDLETAITIFNDMPRKNVVSWNAAISNCAFNGKGELGVQLFDKMLDEGVR 338
Query: 54 PNDVMLVSVLSACVGA 7
PND V L+ C A
Sbjct: 339 PNDSTYVGALACCAHA 354
Score = 38.1 bits (87), Expect(2) = 5e-12
Identities = 27/94 (28%), Positives = 39/94 (41%)
Frame = -2
Query: 544 HQNNFIATRLINFCSSTSFITHASLTFHHVSNPTISLWNSFIRGLSQNNLPIETLKTYAQ 365
H++ I ++ S + + F + T+ WN I L+QN E L + +
Sbjct: 170 HRDVIIWNLMVKGYSQSGNVDMGLGLFRQMGERTVVSWNLMISLLAQNGREKEALALFHE 229
Query: 364 MKTAQIPPDNFTFPFLLKSCATLPPYPPLGRAIH 263
MK PD T +L CA L LGR IH
Sbjct: 230 MKNGGFEPDEATVVTVLPVCAQLGEL-DLGRWIH 262
>gb|EYU45574.1| hypothetical protein MIMGU_mgv1a001941mg [Mimulus guttatus]
Length = 736
Score = 82.8 bits (203), Expect(2) = 7e-31
Identities = 42/88 (47%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Frame = -3
Query: 258 PLRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFR 79
PLRD V++ ++I G R V++ R++F+ +P R+VVSWN +I+GY+Q G+ EAL LFR
Sbjct: 191 PLRDAVSFTALITGYLPRGYVDRARELFDEIPVRDVVSWNAMISGYAQIGKFDEALSLFR 250
Query: 78 KMQSEGILPNDVMLVSVLSAC--VGAIE 1
+M++ + P+ L+SVLSAC VG IE
Sbjct: 251 EMRNAEVAPDVSTLLSVLSACARVGDIE 278
Score = 77.8 bits (190), Expect(2) = 7e-31
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Frame = -2
Query: 613 LFSIATTFNQLTQIHAQILPLGLHQNNFIATRLINFCSSTSF--ITHASLTFHHVSNPTI 440
L S + QIH+ + GLH F ++LI+FC+ + + +++A F + NP
Sbjct: 35 LLSKCRSIKTFKQIHSHFIKFGLHNTQFAVSKLIDFCAVSPYGNLSYAVSIFDSIHNPNH 94
Query: 439 SLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCATLPPYPPLGRAIH 263
++N IRG S ++P L Y +M + P+++TFPFLLKSC P G+ +H
Sbjct: 95 VIYNMMIRGYSLGSVPKSALNCYVKMLFLGLEPNSYTFPFLLKSCTKFPT-AQTGKQVH 152
Score = 57.8 bits (138), Expect(2) = 3e-11
Identities = 27/80 (33%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = -3
Query: 234 NSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKMQSEGIL 55
N+MI + N+ R +F+ + E+++VSWN +I GY+ + AL +FR +Q +
Sbjct: 300 NAMIDMYAKCGNLHTARKLFDGIKEKDIVSWNVMIGGYTHMSEYKNALEMFRLLQLNKVE 359
Query: 54 PNDVMLVSVLSAC--VGAIE 1
PNDV ++++ AC +GA++
Sbjct: 360 PNDVTFLNIIPACAQLGALD 379
Score = 36.6 bits (83), Expect(2) = 3e-11
Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 31/123 (25%)
Frame = -2
Query: 577 QIHAQILPLGLHQNNFIATRLINF----------------------CSSTSFIT------ 482
Q+H + GL + ++ T LIN S T+ IT
Sbjct: 150 QVHGHVFKFGLDSDVYVHTSLINMYAHHGDLEDARMVFDKSPLRDAVSFTALITGYLPRG 209
Query: 481 ---HASLTFHHVSNPTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLK 311
A F + + WN+ I G +Q E L + +M+ A++ PD T +L
Sbjct: 210 YVDRARELFDEIPVRDVVSWNAMISGYAQIGKFDEALSLFREMRNAEVAPDVSTLLSVLS 269
Query: 310 SCA 302
+CA
Sbjct: 270 ACA 272
Score = 60.5 bits (145), Expect = 4e-07
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = -3
Query: 237 WNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKMQSEGI 58
W S+I + N+E + IF +++ SWN +I+G + +G A A+ LF KM EG+
Sbjct: 401 WTSLINMYAKCGNIEAAKQIFYGTKTKSLASWNAMISGLAMHGDASNAIELFSKMAKEGL 460
Query: 57 L-PNDVMLVSVLSACVGA 7
P+++ VSVLSAC A
Sbjct: 461 FKPDEITFVSVLSACCHA 478
>ref|XP_004292867.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Fragaria vesca subsp. vesca]
Length = 544
Score = 80.9 bits (198), Expect(2) = 1e-30
Identities = 37/89 (41%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Frame = -3
Query: 261 MPLRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLF 82
M RDV++WNS+++G R + K R +F M ++++VSW +++GY++ G +AL +F
Sbjct: 178 MTERDVISWNSLLSGYVRLGQMTKARAVFEEMSDKSIVSWTAMVSGYTRIGCYGDALEIF 237
Query: 81 RKMQSEGILPNDVMLVSVLSAC--VGAIE 1
R+MQ GI P+++ +VSVL AC +GA+E
Sbjct: 238 RRMQMLGIEPDEISVVSVLPACSQLGALE 266
Score = 79.0 bits (193), Expect(2) = 1e-30
Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 5/112 (4%)
Frame = -2
Query: 583 LTQIHAQILPLGLHQNNFIATRLINFCSSTSFITHASLTFHHVSNPTISLWNSFIRGLSQ 404
L +IHAQI+ L L Q+NF+ T++++ C + + +ASL F V P + L+N+ IR +
Sbjct: 30 LKKIHAQIVKLSLSQSNFLVTKMVDVCDYSGNVNYASLLFKQVLEPNVFLFNAMIRAYTH 89
Query: 403 NNLPIETLKTYAQM-----KTAQIPPDNFTFPFLLKSCATLPPYPPLGRAIH 263
N + + Y QM I PD FTFPF++K CA L LGR +H
Sbjct: 90 NYVYDSAIALYKQMLRHPESETLIFPDKFTFPFVIKCCAGL-GCEDLGRQVH 140
Score = 61.2 bits (147), Expect(2) = 7e-11
Identities = 30/80 (37%), Positives = 51/80 (63%)
Frame = -3
Query: 255 LRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRK 76
L+ V N++I + +++ +F++M R+V+SW+T+IAG + NG+A EA+ LF++
Sbjct: 281 LQSVSVCNALIEMYVKCGCIDQAWQLFDQMSGRDVISWSTMIAGLANNGKAHEAVELFQE 340
Query: 75 MQSEGILPNDVMLVSVLSAC 16
MQ PN + + VLSAC
Sbjct: 341 MQRVKTEPNGITFLGVLSAC 360
Score = 32.0 bits (71), Expect(2) = 7e-11
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = -2
Query: 487 ITHASLTFHHVSNPTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKS 308
+T A F +S+ +I W + + G ++ + L+ + +M+ I PD + +L +
Sbjct: 199 MTKARAVFEEMSDKSIVSWTAMVSGYTRIGCYGDALEIFRRMQMLGIEPDEISVVSVLPA 258
Query: 307 CATLPPYPPLGRAIH 263
C+ L +G+ IH
Sbjct: 259 CSQLGAL-EVGKWIH 272
>ref|XP_004287591.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Fragaria vesca subsp. vesca]
Length = 487
Score = 83.2 bits (204), Expect(2) = 1e-30
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Frame = -3
Query: 261 MPLRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLF 82
M RDV+ WN MI G + +VE G +F RM ERNVVSWNT+I+ +QNG+ EA+ +F
Sbjct: 169 MSERDVIVWNLMIKGFCKMGDVETGLGLFRRMGERNVVSWNTMISCLAQNGRDGEAVEVF 228
Query: 81 RKMQSEGILPNDVMLVSVLSAC--VGAIE 1
+M+ EG ++ +VSVL AC +GA+E
Sbjct: 229 NEMREEGFEIDEATVVSVLPACGQLGAVE 257
Score = 76.6 bits (187), Expect(2) = 1e-30
Identities = 48/127 (37%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Frame = -2
Query: 640 RVFEEQIFYLFSIATTFNQLTQIHAQILPLGLHQNNFIATRLINFCSSTSFITHASLTFH 461
R E ++ L T QLTQIH +L GL Q N + T I+ CSS + +A L F
Sbjct: 6 REAERRVLRLLHGRQTLTQLTQIHGHLLRHGLDQLNLLITHFISACSSLNQTHYAHLIFQ 65
Query: 460 HVSNPTISLWNSFIRGLSQN-NLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCATLPPYP 284
+P I L+NS I+ S + +L ++ MK +I PD FTFP LLKSC+ +
Sbjct: 66 QTHHPNILLFNSLIKSFSLSPPSSHSSLLIFSHMKRRRICPDEFTFPPLLKSCSNICD-S 124
Query: 283 PLGRAIH 263
LG+ +H
Sbjct: 125 RLGQCVH 131
Score = 52.8 bits (125), Expect(2) = 1e-07
Identities = 24/76 (31%), Positives = 42/76 (55%)
Frame = -3
Query: 234 NSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKMQSEGIL 55
N++++ + +++ +F M +NVVSWNT+I GY+ NG+ + LF +M +
Sbjct: 280 NAVVSFYCKCGDLDAACSVFKGMARKNVVSWNTLILGYAFNGRGELGIELFEEMMNADEK 339
Query: 54 PNDVMLVSVLSACVGA 7
PN+ V L+ C A
Sbjct: 340 PNEATFVGALTCCTHA 355
Score = 29.3 bits (64), Expect(2) = 1e-07
Identities = 21/82 (25%), Positives = 34/82 (41%)
Frame = -2
Query: 508 FCSSTSFITHASLTFHHVSNPTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFT 329
FC T L F + + WN+ I L+QN E ++ + +M+ D T
Sbjct: 184 FCKMGDVETGLGL-FRRMGERNVVSWNTMISCLAQNGRDGEAVEVFNEMREEGFEIDEAT 242
Query: 328 FPFLLKSCATLPPYPPLGRAIH 263
+L +C L +G+ IH
Sbjct: 243 VVSVLPACGQLGAV-EVGKWIH 263
>ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 79.7 bits (195), Expect(2) = 3e-30
Identities = 38/86 (44%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Frame = -3
Query: 252 RDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKM 73
RDV+ WN MI G + ++E G +F +M +R+VVSWN++IAG Q+G+ EAL LFR+M
Sbjct: 171 RDVIVWNMMIRGFCKVGDIEMGFRLFRQMRDRSVVSWNSMIAGLEQSGRDGEALELFREM 230
Query: 72 QSEGILPNDVMLVSVLSAC--VGAIE 1
G P+D +V++L C +GA++
Sbjct: 231 WDHGFEPDDATVVTILPVCARLGAVD 256
Score = 79.0 bits (193), Expect(2) = 3e-30
Identities = 45/111 (40%), Positives = 63/111 (56%)
Frame = -2
Query: 595 TFNQLTQIHAQILPLGLHQNNFIATRLINFCSSTSFITHASLTFHHVSNPTISLWNSFIR 416
T QL QIHA IL LHQ+N I + I+ C + + +A+L FH NP + L+NS I+
Sbjct: 21 TRTQLPQIHAHILRHHLHQSNQILSHFISVCGALDKMGYANLVFHQTQNPNLLLFNSMIK 80
Query: 415 GLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCATLPPYPPLGRAIH 263
G S +L ++QMK I PD FTF LLKSC+ + +G+ +H
Sbjct: 81 GYSLCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICD-NRIGKGVH 130
Score = 63.2 bits (152), Expect(2) = 3e-12
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = -3
Query: 255 LRDVVT-WNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFR 79
LRD ++ NS++ + +E +FN MP++NVVSWN +I+G + NG+ LF
Sbjct: 271 LRDFISVGNSLVDFYCKCGILETAWRVFNEMPQKNVVSWNAMISGLTFNGKGELGADLFE 330
Query: 78 KMQSEGILPNDVMLVSVLSACVGA 7
+M ++G+ PND V VLS C A
Sbjct: 331 EMINKGVRPNDATFVGVLSCCAHA 354
Score = 34.7 bits (78), Expect(2) = 3e-12
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -2
Query: 466 FHHVSNPTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCATL 296
F + + ++ WNS I GL Q+ E L+ + +M PD+ T +L CA L
Sbjct: 196 FRQMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTILPVCARL 252
>ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330049|gb|EFH60468.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 534
Score = 83.2 bits (204), Expect(2) = 4e-30
Identities = 43/111 (38%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Frame = -2
Query: 589 NQLTQIHAQILPLGLHQNNFIATRLINFCSSTSFITHASLTFHHVSNPTISLWNSFIRGL 410
N+ +IHA I+ GL Q++F+ T++++ C + +A+ F+ VSNP + L+NS IR
Sbjct: 24 NEWKKIHACIIVHGLSQSSFMVTKMVDLCDKLGDMDYATRLFNQVSNPNVFLYNSIIRAY 83
Query: 409 SQNNLPIETLKTYAQM--KTAQIPPDNFTFPFLLKSCATLPPYPPLGRAIH 263
+ N+L + ++ Y Q+ KT + PD FTFPF+ KSCA+L LG+ +H
Sbjct: 84 THNSLYCDVIRIYKQLLRKTIEF-PDRFTFPFMFKSCASLGSC-YLGKQVH 132
Score = 75.1 bits (183), Expect(2) = 4e-30
Identities = 35/89 (39%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Frame = -3
Query: 261 MPLRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLF 82
M RDV++WNS+++G R ++K + +F+ M ++ +VSW +I+GY+ G EA+ F
Sbjct: 170 MSERDVISWNSLLSGYARLGQMKKAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFF 229
Query: 81 RKMQSEGILPNDVMLVSVLSAC--VGAIE 1
R+MQ GI P+++ L+SVL +C +G++E
Sbjct: 230 REMQLAGIEPDEISLISVLPSCAHLGSLE 258
Score = 48.9 bits (115), Expect(2) = 5e-09
Identities = 20/55 (36%), Positives = 35/55 (63%)
Frame = -3
Query: 180 IFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKMQSEGILPNDVMLVSVLSAC 16
+F + ++V+SW+T+I+GY+ +G A A F +MQ + PN + + +LSAC
Sbjct: 298 LFEQTKGKDVISWSTMISGYAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSAC 352
Score = 38.1 bits (87), Expect(2) = 5e-09
Identities = 24/73 (32%), Positives = 36/73 (49%)
Frame = -2
Query: 466 FHHVSNPTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCATLPPY 287
FH + + TI W + I G + +E + + +M+ A I PD + +L SCA L
Sbjct: 198 FHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAHLGSL 257
Query: 286 PPLGRAIHDAFER 248
LG+ IH ER
Sbjct: 258 -ELGKWIHMYAER 269
>ref|XP_006408981.1| hypothetical protein EUTSA_v10001958mg [Eutrema salsugineum]
gi|557110137|gb|ESQ50434.1| hypothetical protein
EUTSA_v10001958mg [Eutrema salsugineum]
Length = 531
Score = 80.1 bits (196), Expect(2) = 4e-30
Identities = 36/89 (40%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Frame = -3
Query: 261 MPLRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLF 82
M +RDV++WNS+++G R ++K + +F+ MP++ +VSW +I+GY+ G EA+ F
Sbjct: 170 MSVRDVISWNSLLSGYARLGQMKKAKALFHSMPDKTIVSWTAMISGYTGIGCYVEAMEFF 229
Query: 81 RKMQSEGILPNDVMLVSVLSAC--VGAIE 1
R MQ GI P+++ L+SVL +C +G++E
Sbjct: 230 RGMQLAGIEPDEISLISVLPSCAHLGSLE 258
Score = 78.2 bits (191), Expect(2) = 4e-30
Identities = 39/106 (36%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = -2
Query: 577 QIHAQILPLGLHQNNFIATRLINFCSSTSFITHASLTFHHVSNPTISLWNSFIRGLSQNN 398
+IHA I+ GL Q++F+ T++++ C + A+ F V+NP + L+NS IR + N+
Sbjct: 28 KIHASIIVHGLSQSSFMVTKMVDVCDKIGDMECATRLFKQVANPNVFLYNSIIRAYAHNS 87
Query: 397 LPIETLKTYAQMKTAQIP-PDNFTFPFLLKSCATLPPYPPLGRAIH 263
L + ++ Y Q+ + PD FTFPF+ KSCA++ Y LG+ H
Sbjct: 88 LYRDVIRIYRQLLRKSLDLPDRFTFPFMFKSCASIGSY-YLGKQAH 132
Score = 58.2 bits (139), Expect(2) = 9e-12
Identities = 22/61 (36%), Positives = 42/61 (68%)
Frame = -3
Query: 198 VEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKMQSEGILPNDVMLVSVLSA 19
+ + ++F+RM ++V+SW+T+I+GY+ +G A +A+ F +MQ + PN + + +LSA
Sbjct: 292 ISQAIELFSRMKRKDVISWSTMISGYAHHGNAHQAIETFNEMQRAKVKPNGITFLGLLSA 351
Query: 18 C 16
C
Sbjct: 352 C 352
Score = 38.1 bits (87), Expect(2) = 9e-12
Identities = 23/72 (31%), Positives = 35/72 (48%)
Frame = -2
Query: 478 ASLTFHHVSNPTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCAT 299
A FH + + TI W + I G + +E ++ + M+ A I PD + +L SCA
Sbjct: 194 AKALFHSMPDKTIVSWTAMISGYTGIGCYVEAMEFFRGMQLAGIEPDEISLISVLPSCAH 253
Query: 298 LPPYPPLGRAIH 263
L LG+ IH
Sbjct: 254 LGSL-ELGKWIH 264
>ref|XP_006475832.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Citrus sinensis]
Length = 527
Score = 86.3 bits (212), Expect(2) = 5e-30
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = -3
Query: 258 PLRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFR 79
P RDVVTW +M+ G + + E R++F +MPERN VSW+ ++A YS+ E L LFR
Sbjct: 175 PDRDVVTWTTMVDGYGKMGDFENARELFEKMPERNAVSWSAIMAAYSRISDFKEVLSLFR 234
Query: 78 KMQSEGILPNDVMLVSVLSAC--VGAI 4
+MQ G+ PN+ LVSVL+AC +GAI
Sbjct: 235 QMQEVGMKPNESGLVSVLTACAHLGAI 261
Score = 71.6 bits (174), Expect(2) = 5e-30
Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Frame = -2
Query: 595 TFNQLTQIHAQILPLGLHQNNFIATRLINFCSST---SFITHASLTFHHVSNPTISLWNS 425
T NQL QIHA +L L +N L++ + + SF ++A L F+H S+ ++N+
Sbjct: 23 TLNQLKQIHAHLLKTFLSENPLAIGPLLSVAAISKIPSFFSYARLIFNHSSHRNTFMYNT 82
Query: 424 FIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCATLPPYPPLGRAIH 263
IRG Q N P ++ Y M P+N+TFP L+K+C L P G +H
Sbjct: 83 MIRGYMQANFPKLSVFCYLDMLDMGFEPNNYTFPPLIKACVILGPLENFGMFVH 136
>ref|XP_006344748.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Solanum tuberosum]
Length = 484
Score = 82.4 bits (202), Expect(2) = 5e-30
Identities = 50/126 (39%), Positives = 68/126 (53%)
Frame = -2
Query: 640 RVFEEQIFYLFSIATTFNQLTQIHAQILPLGLHQNNFIATRLINFCSSTSFITHASLTFH 461
R E +I L T QLTQIHA IL LH +N + + I+ C S + + +ASL F
Sbjct: 6 REVERRILRLLHGQKTRTQLTQIHAHILRHHLHHSNQLISHFISICGSLNRMLYASLIFQ 65
Query: 460 HVSNPTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCATLPPYPP 281
H NP I L+NS I+G S ++ ++ MK I PD FTF LLK+CA L
Sbjct: 66 HFQNPNIFLFNSMIKGYSLCGPYQNSVVFFSTMKQRGIWPDEFTFAPLLKACANLEDL-E 124
Query: 280 LGRAIH 263
+G+ +H
Sbjct: 125 MGQGVH 130
Score = 75.5 bits (184), Expect(2) = 5e-30
Identities = 36/82 (43%), Positives = 53/82 (64%)
Frame = -3
Query: 261 MPLRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLF 82
MP RDV+ WN M+ G + NV+ G +F +M ER VVSWN +I+ +QNG+ EAL LF
Sbjct: 168 MPHRDVILWNLMVKGYSQSGNVDMGLGLFRQMGERTVVSWNLMISLLAQNGREKEALALF 227
Query: 81 RKMQSEGILPNDVMLVSVLSAC 16
+M++ P++ +V+VL C
Sbjct: 228 HEMRNGEFEPDEATVVTVLPVC 249
Score = 55.8 bits (133), Expect(2) = 4e-11
Identities = 27/76 (35%), Positives = 42/76 (55%)
Frame = -3
Query: 234 NSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKMQSEGIL 55
N+++ + ++E IFN MP +NVVSWN I+ + NG+ ++LF +M EG+
Sbjct: 279 NALVDFFGKSGDLETAITIFNDMPRKNVVSWNAAISNCAFNGKGELGVQLFDEMLDEGVR 338
Query: 54 PNDVMLVSVLSACVGA 7
PND V + C A
Sbjct: 339 PNDSTYVGAFACCAHA 354
Score = 38.1 bits (87), Expect(2) = 4e-11
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = -2
Query: 466 FHHVSNPTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCATLPPY 287
F + T+ WN I L+QN E L + +M+ + PD T +L CA L
Sbjct: 196 FRQMGERTVVSWNLMISLLAQNGREKEALALFHEMRNGEFEPDEATVVTVLPVCAQLGEL 255
Query: 286 PPLGRAIH 263
LGR IH
Sbjct: 256 -DLGRWIH 262
>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 82.4 bits (202), Expect(2) = 8e-30
Identities = 36/82 (43%), Positives = 58/82 (70%)
Frame = -3
Query: 261 MPLRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLF 82
M +R+VV+W ++I+G ++++ R IF+ +P +NVVSW +I GY +N Q EAL LF
Sbjct: 186 MRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELF 245
Query: 81 RKMQSEGILPNDVMLVSVLSAC 16
++MQ+E I PN+ +VS++ AC
Sbjct: 246 KRMQAENIFPNEYTMVSLIKAC 267
Score = 74.7 bits (182), Expect(2) = 8e-30
Identities = 40/122 (32%), Positives = 60/122 (49%)
Frame = -2
Query: 628 EQIFYLFSIATTFNQLTQIHAQILPLGLHQNNFIATRLINFCSSTSFITHASLTFHHVSN 449
++ +L F L QIHA+I+ GL + + +LI+ S+ I +A L F+ + N
Sbjct: 28 KKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQN 87
Query: 448 PTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCATLPPYPPLGRA 269
P WN IR + N L + L Y M I D FTFPF++K+C LG+
Sbjct: 88 PCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSI-DLGKV 146
Query: 268 IH 263
+H
Sbjct: 147 VH 148
Score = 52.8 bits (125), Expect(2) = 3e-10
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Frame = -3
Query: 198 VEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKMQSE--------GILPNDV 43
++ R +F+ +P RNVVSW ++I GY QN QA AL LF+ E + + V
Sbjct: 2066 LKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSV 2125
Query: 42 MLVSVLSAC 16
++VSVLSAC
Sbjct: 2126 VMVSVLSAC 2134
Score = 38.5 bits (88), Expect(2) = 3e-10
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = -2
Query: 478 ASLTFHHVSNPTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCAT 299
A+ + +V + WNS I L++ +E L+ ++ ++ + P +FP +KSC+
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 2027
Query: 298 L 296
L
Sbjct: 2028 L 2028
Score = 65.5 bits (158), Expect = 1e-08
Identities = 30/61 (49%), Positives = 41/61 (67%)
Frame = -3
Query: 198 VEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKMQSEGILPNDVMLVSVLSA 19
VE + F+RM E+NV SW ++AGY +G+A EAL +F KM G+ PN + VSVL+A
Sbjct: 2277 VEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAA 2336
Query: 18 C 16
C
Sbjct: 2337 C 2337
>ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 82.4 bits (202), Expect(2) = 8e-30
Identities = 36/82 (43%), Positives = 58/82 (70%)
Frame = -3
Query: 261 MPLRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLF 82
M +R+VV+W ++I+G ++++ R IF+ +P +NVVSW +I GY +N Q EAL LF
Sbjct: 186 MRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELF 245
Query: 81 RKMQSEGILPNDVMLVSVLSAC 16
++MQ+E I PN+ +VS++ AC
Sbjct: 246 KRMQAENIFPNEYTMVSLIKAC 267
Score = 74.7 bits (182), Expect(2) = 8e-30
Identities = 40/122 (32%), Positives = 60/122 (49%)
Frame = -2
Query: 628 EQIFYLFSIATTFNQLTQIHAQILPLGLHQNNFIATRLINFCSSTSFITHASLTFHHVSN 449
++ +L F L QIHA+I+ GL + + +LI+ S+ I +A L F+ + N
Sbjct: 28 KKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQN 87
Query: 448 PTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCATLPPYPPLGRA 269
P WN IR + N L + L Y M I D FTFPF++K+C LG+
Sbjct: 88 PCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSI-DLGKV 146
Query: 268 IH 263
+H
Sbjct: 147 VH 148
Score = 52.8 bits (125), Expect(2) = 3e-10
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Frame = -3
Query: 198 VEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKMQSE--------GILPNDV 43
++ R +F+ +P RNVVSW ++I GY QN QA AL LF+ E + + V
Sbjct: 1193 LKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSV 1252
Query: 42 MLVSVLSAC 16
++VSVLSAC
Sbjct: 1253 VMVSVLSAC 1261
Score = 38.5 bits (88), Expect(2) = 3e-10
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = -2
Query: 478 ASLTFHHVSNPTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCAT 299
A+ + +V + WNS I L++ +E L+ ++ ++ + P +FP +KSC+
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154
Query: 298 L 296
L
Sbjct: 1155 L 1155
Score = 65.5 bits (158), Expect = 1e-08
Identities = 30/61 (49%), Positives = 41/61 (67%)
Frame = -3
Query: 198 VEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKMQSEGILPNDVMLVSVLSA 19
VE + F+RM E+NV SW ++AGY +G+A EAL +F KM G+ PN + VSVL+A
Sbjct: 1404 VEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAA 1463
Query: 18 C 16
C
Sbjct: 1464 C 1464
>ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 568
Score = 80.5 bits (197), Expect(2) = 8e-30
Identities = 38/89 (42%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Frame = -3
Query: 261 MPLRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLF 82
M RDV++WNS+I G + + R++F+ MP R +VSW T+I GY + G +AL +F
Sbjct: 172 MSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVF 231
Query: 81 RKMQSEGILPNDVMLVSVLSAC--VGAIE 1
R+MQ GI P+++ +++VL AC +GA+E
Sbjct: 232 REMQMVGIEPDEISIIAVLPACAQLGALE 260
Score = 76.6 bits (187), Expect(2) = 8e-30
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Frame = -2
Query: 616 YLFSIATTFN--QLTQIHAQILPLGLHQNNFIATRLINFCSSTSFITHASLTFHHVSNPT 443
Y+ S+ F QL +IHA ++ L L Q+NF+ T++++ C + +++A+L F + +P
Sbjct: 13 YITSLKNCFKITQLKKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFKQLLHPN 72
Query: 442 ISLWNSFIRGLSQNNLPIETLKTYAQM---KTAQIPPDNFTFPFLLKSCATLPPYPPLGR 272
I +N+ IR + N + + QM T + PD FTFPF++KSC + + LG
Sbjct: 73 IFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCH-RLGM 131
Query: 271 AIH 263
+H
Sbjct: 132 QVH 134
Score = 53.5 bits (127), Expect(2) = 1e-07
Identities = 24/80 (30%), Positives = 50/80 (62%)
Frame = -3
Query: 255 LRDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRK 76
LR N++I + +++ ++F+++ E++V+SW+T+I G + +G+ EA++LF +
Sbjct: 275 LRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEE 334
Query: 75 MQSEGILPNDVMLVSVLSAC 16
M + PN++ + VL AC
Sbjct: 335 MCKVRVAPNEITFLGVLLAC 354
Score = 28.5 bits (62), Expect(2) = 1e-07
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2
Query: 445 TISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCATLPPYPPLGRAI 266
TI W + I G + + L + +M+ I PD + +L +CA L +G+ I
Sbjct: 207 TIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGAL-EVGKWI 265
Query: 265 H 263
H
Sbjct: 266 H 266
>ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g20540 gi|4586036|gb|AAD25654.1| unknown protein
[Arabidopsis thaliana] gi|67633530|gb|AAY78689.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana] gi|330251931|gb|AEC07025.1| mitochondrial
editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 82.4 bits (202), Expect(2) = 8e-30
Identities = 42/111 (37%), Positives = 72/111 (64%), Gaps = 2/111 (1%)
Frame = -2
Query: 589 NQLTQIHAQILPLGLHQNNFIATRLINFCSSTSFITHASLTFHHVSNPTISLWNSFIRGL 410
N+ +I+A I+ GL Q++F+ T++++FC + +A+ F+ VSNP + L+NS IR
Sbjct: 24 NEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAY 83
Query: 409 SQNNLPIETLKTYAQM--KTAQIPPDNFTFPFLLKSCATLPPYPPLGRAIH 263
+ N+L + ++ Y Q+ K+ ++ PD FTFPF+ KSCA+L LG+ +H
Sbjct: 84 THNSLYCDVIRIYKQLLRKSFEL-PDRFTFPFMFKSCASLGSC-YLGKQVH 132
Score = 74.7 bits (182), Expect(2) = 8e-30
Identities = 34/86 (39%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Frame = -3
Query: 252 RDVVTWNSMIAGCFRRENVEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKM 73
RDV++WNS+++G R ++K + +F+ M ++ +VSW +I+GY+ G EA+ FR+M
Sbjct: 173 RDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREM 232
Query: 72 QSEGILPNDVMLVSVLSAC--VGAIE 1
Q GI P+++ L+SVL +C +G++E
Sbjct: 233 QLAGIEPDEISLISVLPSCAQLGSLE 258
Score = 52.8 bits (125), Expect(2) = 3e-10
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = -3
Query: 198 VEKGRDIFNRMPERNVVSWNTVIAGYSQNGQAPEALRLFRKMQSEGILPNDVMLVSVLSA 19
+ + +F +M ++V+SW+T+I+GY+ +G A A+ F +MQ + PN + + +LSA
Sbjct: 292 ISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSA 351
Query: 18 C 16
C
Sbjct: 352 C 352
Score = 38.1 bits (87), Expect(2) = 3e-10
Identities = 24/73 (32%), Positives = 36/73 (49%)
Frame = -2
Query: 466 FHHVSNPTISLWNSFIRGLSQNNLPIETLKTYAQMKTAQIPPDNFTFPFLLKSCATLPPY 287
FH + + TI W + I G + +E + + +M+ A I PD + +L SCA L
Sbjct: 198 FHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSL 257
Query: 286 PPLGRAIHDAFER 248
LG+ IH ER
Sbjct: 258 -ELGKWIHLYAER 269