BLASTX nr result
ID: Sinomenium21_contig00025261
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Sinomenium21_contig00025261 (313 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_007032989.1| DNA repair protein xp-C / rad4, putative iso... 59 5e-07 ref|XP_007032988.1| DNA repair protein xp-C / rad4, putative iso... 59 5e-07 ref|XP_002305874.2| hypothetical protein POPTR_0004s08580g [Popu... 56 6e-06 >ref|XP_007032989.1| DNA repair protein xp-C / rad4, putative isoform 2 [Theobroma cacao] gi|508712018|gb|EOY03915.1| DNA repair protein xp-C / rad4, putative isoform 2 [Theobroma cacao] Length = 908 Score = 59.3 bits (142), Expect = 5e-07 Identities = 27/63 (42%), Positives = 42/63 (66%) Frame = +1 Query: 124 NTLPEKDDTDGSDWEDGYIAVSDPRNHNLDNRGRELIIQFNDSPSSSNKKPIRRASAEEK 303 N + +D + SDWEDG I DP +++ R + L I+F++ S+ +KP+RRASAE+K Sbjct: 32 NLFDDSEDMNDSDWEDGSIPKLDPVDNSPKERMKGLTIEFDEPSGSAGRKPVRRASAEDK 91 Query: 304 ELA 312 E+A Sbjct: 92 EIA 94 >ref|XP_007032988.1| DNA repair protein xp-C / rad4, putative isoform 1 [Theobroma cacao] gi|508712017|gb|EOY03914.1| DNA repair protein xp-C / rad4, putative isoform 1 [Theobroma cacao] Length = 974 Score = 59.3 bits (142), Expect = 5e-07 Identities = 27/63 (42%), Positives = 42/63 (66%) Frame = +1 Query: 124 NTLPEKDDTDGSDWEDGYIAVSDPRNHNLDNRGRELIIQFNDSPSSSNKKPIRRASAEEK 303 N + +D + SDWEDG I DP +++ R + L I+F++ S+ +KP+RRASAE+K Sbjct: 98 NLFDDSEDMNDSDWEDGSIPKLDPVDNSPKERMKGLTIEFDEPSGSAGRKPVRRASAEDK 157 Query: 304 ELA 312 E+A Sbjct: 158 EIA 160 >ref|XP_002305874.2| hypothetical protein POPTR_0004s08580g [Populus trichocarpa] gi|550340612|gb|EEE86385.2| hypothetical protein POPTR_0004s08580g [Populus trichocarpa] Length = 898 Score = 55.8 bits (133), Expect = 6e-06 Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 2/102 (1%) Frame = +1 Query: 13 SKLIGDDGQEAEKEVLCDVPMPANVLQEGKITDESFFNTLPEKD-DTDGSDWEDGYIAV- 186 S G++G ++ + + D + N L F T E D + D DWEDG ++ Sbjct: 62 SAATGENGLKSNGKQVVDARVTWNDLDA-----RGFQTTFQESDQEMDDIDWEDGSSSIL 116 Query: 187 SDPRNHNLDNRGRELIIQFNDSPSSSNKKPIRRASAEEKELA 312 +NH D RE+ I+F++SP S+ +KPIRRA+AEEK LA Sbjct: 117 GHVKNHPGDGI-REVTIEFSESPDSAKRKPIRRATAEEKGLA 157