BLASTX nr result

ID: Sinomenium21_contig00025222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00025222
         (472 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264772.1| PREDICTED: ATPase family AAA domain-containi...    57   1e-11
emb|CBI36654.3| unnamed protein product [Vitis vinifera]               57   1e-11
ref|XP_007034084.1| Cell division cycle protein 48-related / CDC...    53   5e-10
ref|XP_004170450.1| PREDICTED: LOW QUALITY PROTEIN: ATPase famil...    48   2e-06

>ref|XP_002264772.1| PREDICTED: ATPase family AAA domain-containing protein 2B-like [Vitis
            vinifera]
          Length = 1218

 Score = 57.4 bits (137), Expect(2) = 1e-11
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 470  ATVTRARARLCNVQLEVNLSQSYEALRRPKKIIDAEPA 357
            ATVTRA ARL NVQ EVNL QSYEAL+RPKK +DA P+
Sbjct: 1046 ATVTRASARLRNVQPEVNLDQSYEALKRPKKNVDAAPS 1083



 Score = 37.4 bits (85), Expect(2) = 1e-11
 Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
 Frame = -1

Query: 337  ESGPSKLESAQPAPSQEPEVNSV--------VLERLDESLPLMNTWKFLEMHLSMLQENA 182
            E  P + E+A    SQE E N               D   P  +         S  QE+ 
Sbjct: 1088 EDKPRQQEAAPSKSSQENEANEANDASPEQPECSLADNHRPETSQEASGHTSASGSQEDV 1147

Query: 181  IMADGEIPGQVEPVKQRLVKRTEGYDVP 98
            IM+D EI  Q+E VK   V+RTE Y +P
Sbjct: 1148 IMSDVEILSQMESVKLLFVERTENYGIP 1175


>emb|CBI36654.3| unnamed protein product [Vitis vinifera]
          Length = 1105

 Score = 57.4 bits (137), Expect(2) = 1e-11
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 470  ATVTRARARLCNVQLEVNLSQSYEALRRPKKIIDAEPA 357
            ATVTRA ARL NVQ EVNL QSYEAL+RPKK +DA P+
Sbjct: 933  ATVTRASARLRNVQPEVNLDQSYEALKRPKKNVDAAPS 970



 Score = 37.4 bits (85), Expect(2) = 1e-11
 Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
 Frame = -1

Query: 337  ESGPSKLESAQPAPSQEPEVNSV--------VLERLDESLPLMNTWKFLEMHLSMLQENA 182
            E  P + E+A    SQE E N               D   P  +         S  QE+ 
Sbjct: 975  EDKPRQQEAAPSKSSQENEANEANDASPEQPECSLADNHRPETSQEASGHTSASGSQEDV 1034

Query: 181  IMADGEIPGQVEPVKQRLVKRTEGYDVP 98
            IM+D EI  Q+E VK   V+RTE Y +P
Sbjct: 1035 IMSDVEILSQMESVKLLFVERTENYGIP 1062


>ref|XP_007034084.1| Cell division cycle protein 48-related / CDC48-related isoform 2
            [Theobroma cacao] gi|508713113|gb|EOY05010.1| Cell
            division cycle protein 48-related / CDC48-related isoform
            2 [Theobroma cacao]
          Length = 1207

 Score = 52.8 bits (125), Expect(2) = 5e-10
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = -3

Query: 467  TVTRARARLCNVQLEVNLSQSYEALRRPKKIIDAEPAEEKT 345
            TVTRA ARL NVQ EVNL QSYEAL+RPKK +D   AEEK+
Sbjct: 1045 TVTRASARLRNVQPEVNL-QSYEALKRPKKNVDTVLAEEKS 1084



 Score = 36.6 bits (83), Expect(2) = 5e-10
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
 Frame = -1

Query: 319  LESAQPAPSQEPEVNSVVLERLDESLPLMNTWKFLEMHLSMLQ----ENAIMADGEIPGQ 152
            ++S Q   S+  E N +  ER + +    N  +       ++     E+  MAD EI  Q
Sbjct: 1087 IDSVQTKSSEALEANEINCERPESTCGDGNQQESCTEASDLINGSGSEDIRMADDEISNQ 1146

Query: 151  VEPVKQRLVKRTEGYDVP 98
            VE  KQ  V+RT+ Y +P
Sbjct: 1147 VESAKQLFVERTKSYSIP 1164


>ref|XP_004170450.1| PREDICTED: LOW QUALITY PROTEIN: ATPase family AAA domain-containing
            protein At1g05910-like [Cucumis sativus]
          Length = 1148

 Score = 47.8 bits (112), Expect(2) = 2e-06
 Identities = 27/41 (65%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
 Frame = -3

Query: 467  TVTRARARLCNVQLEVNLSQSYEALRRPKKIID-AEPAEEK 348
            TVTRA ARL NVQ EV+ ++SYEAL+RPKK  D A  AEE+
Sbjct: 981  TVTRASARLRNVQPEVDFNRSYEALKRPKKNTDAAHHAEER 1021



 Score = 29.3 bits (64), Expect(2) = 2e-06
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
 Frame = -1

Query: 328  PSKLESAQPAPSQEPEVNSVVLERLDESLPLMNTWKFLEMHLSMLQE-----NAIMADGE 164
            P   +S  P PSQEP+      E         N         S L +     +A ++D  
Sbjct: 1024 PQHQDSVAPKPSQEPDTGEASRESSKACPGSGNMCDASGGEASDLTDWNCSRDASISDSY 1083

Query: 163  IPGQVEPVKQRLVKRTEGYDVP 98
            I  Q E VK  L++RT  Y +P
Sbjct: 1084 ILNQFESVKNVLLERTVKYGIP 1105


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