BLASTX nr result
ID: Sinomenium21_contig00025222
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Sinomenium21_contig00025222 (472 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264772.1| PREDICTED: ATPase family AAA domain-containi... 57 1e-11 emb|CBI36654.3| unnamed protein product [Vitis vinifera] 57 1e-11 ref|XP_007034084.1| Cell division cycle protein 48-related / CDC... 53 5e-10 ref|XP_004170450.1| PREDICTED: LOW QUALITY PROTEIN: ATPase famil... 48 2e-06 >ref|XP_002264772.1| PREDICTED: ATPase family AAA domain-containing protein 2B-like [Vitis vinifera] Length = 1218 Score = 57.4 bits (137), Expect(2) = 1e-11 Identities = 29/38 (76%), Positives = 32/38 (84%) Frame = -3 Query: 470 ATVTRARARLCNVQLEVNLSQSYEALRRPKKIIDAEPA 357 ATVTRA ARL NVQ EVNL QSYEAL+RPKK +DA P+ Sbjct: 1046 ATVTRASARLRNVQPEVNLDQSYEALKRPKKNVDAAPS 1083 Score = 37.4 bits (85), Expect(2) = 1e-11 Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 8/88 (9%) Frame = -1 Query: 337 ESGPSKLESAQPAPSQEPEVNSV--------VLERLDESLPLMNTWKFLEMHLSMLQENA 182 E P + E+A SQE E N D P + S QE+ Sbjct: 1088 EDKPRQQEAAPSKSSQENEANEANDASPEQPECSLADNHRPETSQEASGHTSASGSQEDV 1147 Query: 181 IMADGEIPGQVEPVKQRLVKRTEGYDVP 98 IM+D EI Q+E VK V+RTE Y +P Sbjct: 1148 IMSDVEILSQMESVKLLFVERTENYGIP 1175 >emb|CBI36654.3| unnamed protein product [Vitis vinifera] Length = 1105 Score = 57.4 bits (137), Expect(2) = 1e-11 Identities = 29/38 (76%), Positives = 32/38 (84%) Frame = -3 Query: 470 ATVTRARARLCNVQLEVNLSQSYEALRRPKKIIDAEPA 357 ATVTRA ARL NVQ EVNL QSYEAL+RPKK +DA P+ Sbjct: 933 ATVTRASARLRNVQPEVNLDQSYEALKRPKKNVDAAPS 970 Score = 37.4 bits (85), Expect(2) = 1e-11 Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 8/88 (9%) Frame = -1 Query: 337 ESGPSKLESAQPAPSQEPEVNSV--------VLERLDESLPLMNTWKFLEMHLSMLQENA 182 E P + E+A SQE E N D P + S QE+ Sbjct: 975 EDKPRQQEAAPSKSSQENEANEANDASPEQPECSLADNHRPETSQEASGHTSASGSQEDV 1034 Query: 181 IMADGEIPGQVEPVKQRLVKRTEGYDVP 98 IM+D EI Q+E VK V+RTE Y +P Sbjct: 1035 IMSDVEILSQMESVKLLFVERTENYGIP 1062 >ref|XP_007034084.1| Cell division cycle protein 48-related / CDC48-related isoform 2 [Theobroma cacao] gi|508713113|gb|EOY05010.1| Cell division cycle protein 48-related / CDC48-related isoform 2 [Theobroma cacao] Length = 1207 Score = 52.8 bits (125), Expect(2) = 5e-10 Identities = 30/41 (73%), Positives = 33/41 (80%) Frame = -3 Query: 467 TVTRARARLCNVQLEVNLSQSYEALRRPKKIIDAEPAEEKT 345 TVTRA ARL NVQ EVNL QSYEAL+RPKK +D AEEK+ Sbjct: 1045 TVTRASARLRNVQPEVNL-QSYEALKRPKKNVDTVLAEEKS 1084 Score = 36.6 bits (83), Expect(2) = 5e-10 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 4/78 (5%) Frame = -1 Query: 319 LESAQPAPSQEPEVNSVVLERLDESLPLMNTWKFLEMHLSMLQ----ENAIMADGEIPGQ 152 ++S Q S+ E N + ER + + N + ++ E+ MAD EI Q Sbjct: 1087 IDSVQTKSSEALEANEINCERPESTCGDGNQQESCTEASDLINGSGSEDIRMADDEISNQ 1146 Query: 151 VEPVKQRLVKRTEGYDVP 98 VE KQ V+RT+ Y +P Sbjct: 1147 VESAKQLFVERTKSYSIP 1164 >ref|XP_004170450.1| PREDICTED: LOW QUALITY PROTEIN: ATPase family AAA domain-containing protein At1g05910-like [Cucumis sativus] Length = 1148 Score = 47.8 bits (112), Expect(2) = 2e-06 Identities = 27/41 (65%), Positives = 32/41 (78%), Gaps = 1/41 (2%) Frame = -3 Query: 467 TVTRARARLCNVQLEVNLSQSYEALRRPKKIID-AEPAEEK 348 TVTRA ARL NVQ EV+ ++SYEAL+RPKK D A AEE+ Sbjct: 981 TVTRASARLRNVQPEVDFNRSYEALKRPKKNTDAAHHAEER 1021 Score = 29.3 bits (64), Expect(2) = 2e-06 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 5/82 (6%) Frame = -1 Query: 328 PSKLESAQPAPSQEPEVNSVVLERLDESLPLMNTWKFLEMHLSMLQE-----NAIMADGE 164 P +S P PSQEP+ E N S L + +A ++D Sbjct: 1024 PQHQDSVAPKPSQEPDTGEASRESSKACPGSGNMCDASGGEASDLTDWNCSRDASISDSY 1083 Query: 163 IPGQVEPVKQRLVKRTEGYDVP 98 I Q E VK L++RT Y +P Sbjct: 1084 ILNQFESVKNVLLERTVKYGIP 1105