BLASTX nr result

ID: Sinomenium21_contig00025103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00025103
         (1253 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77641.1| hypothetical protein VITISV_007623 [Vitis vinifera]    35   3e-08
ref|XP_007212580.1| hypothetical protein PRUPE_ppa015871mg, part...    52   1e-05

>emb|CAN77641.1| hypothetical protein VITISV_007623 [Vitis vinifera]
          Length = 1284

 Score = 35.4 bits (80), Expect(4) = 3e-08
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +2

Query: 821 STIVTSHEEFRPICSRLDRFLNSFGWDELFPDARQQA 931
           ++   S+ +  P+C RLDRFL S  W  LFP   Q+A
Sbjct: 242 ASFTXSNMQESPVCXRLDRFLYSNEWGLLFPQGLQEA 278



 Score = 34.3 bits (77), Expect(4) = 3e-08
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +2

Query: 491 PDIVILHEIKQCTVDRSLMG*LRQFRFKECIILPAIGTAGGI 616
           PD+V++ E K+   DR  +G +   R K+ + LP  G +GGI
Sbjct: 91  PDVVMIQETKKENCDRRFVGSVWTVRNKDWVALPXSGASGGI 132



 Score = 31.2 bits (69), Expect(4) = 3e-08
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
 Frame = +3

Query: 612 GFLIAWDVRSVEVSHDLLGNFSVSIM----GIKSV-VVIIHGSTWGQDRSTF*GE---IV 767
           G LI WD +++     ++G+FSVS+     G   + +  ++G      R  F  E   I 
Sbjct: 131 GILIIWDSKNLRREEVVIGSFSVSVKFSLDGCGPLWISAVYGPNSPSLRKDFWVELFDIY 190

Query: 768 GLSVLLCGRNWCVGGNF 818
           GL+  L    WCVGG+F
Sbjct: 191 GLTYPL----WCVGGDF 203



 Score = 23.1 bits (48), Expect(4) = 3e-08
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +1

Query: 424 MRILSWNIRG 453
           M+I+SWN+RG
Sbjct: 63  MKIISWNVRG 72


>ref|XP_007212580.1| hypothetical protein PRUPE_ppa015871mg, partial [Prunus persica]
           gi|462408445|gb|EMJ13779.1| hypothetical protein
           PRUPE_ppa015871mg, partial [Prunus persica]
          Length = 1499

 Score = 52.4 bits (124), Expect(2) = 1e-05
 Identities = 52/191 (27%), Positives = 73/191 (38%), Gaps = 41/191 (21%)
 Frame = +2

Query: 482 RIKPDIVILHEIKQCTVDRSLMG*LRQFRFKECIILPAIGTAGGIS---NSMGC*I---- 640
           R+KPDIVIL E K+  VDR L+  +   RFKE +  P++G +GGI+   NS    +    
Sbjct: 348 RLKPDIVILLETKKEIVDRQLVAGVWGSRFKEWVFSPSLGRSGGIAVLWNSQSVSVIDSM 407

Query: 641 SGSFP*FVREFLSLNNGDQISGGYHPWLNLGTRQEYFLGRDCRLKCAVMW--------AE 796
            G F   +R   ++     +SG Y P         +    D    C  MW          
Sbjct: 408 VGEFSVSIRIEENIGTDWWLSGIYGPCRQRERNSFWEELADLYGYCGDMWCLGGDFNVVR 467

Query: 797 LVCRRELYSTIVTSHEEF--------------------------RPICSRLDRFLNSFGW 898
               +     +  S  +F                            +C RLDRFL S  W
Sbjct: 468 FSAEKSNEGRVTKSMRDFNDFIQETNLRDPILLNASFTWSNLRENAVCRRLDRFLVSGSW 527

Query: 899 DELFPDARQQA 931
           +E FP  R +A
Sbjct: 528 EEHFPHYRHKA 538



 Score = 25.0 bits (53), Expect(2) = 1e-05
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +1

Query: 421 LMRILSWNIRG 453
           LM+I+SWNIRG
Sbjct: 322 LMKIISWNIRG 332


Top