BLASTX nr result
ID: Sinomenium21_contig00025026
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00025026
(968 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007013371.1| Zinc finger family protein, putative isoform... 345 2e-92
ref|XP_002524459.1| conserved hypothetical protein [Ricinus comm... 331 3e-88
ref|XP_007202316.1| hypothetical protein PRUPE_ppa008076mg [Prun... 325 2e-86
ref|XP_006450980.1| hypothetical protein CICLE_v10008851mg [Citr... 319 9e-85
ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containin... 316 8e-84
ref|XP_002313732.1| zinc finger family protein [Populus trichoca... 314 3e-83
ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containin... 313 7e-83
gb|EXB33953.1| Zinc finger CCCH domain-containing protein 39 [Mo... 310 7e-82
ref|XP_003550830.1| PREDICTED: zinc finger CCCH domain-containin... 290 8e-76
ref|XP_003524539.1| PREDICTED: zinc finger CCCH domain-containin... 288 2e-75
ref|XP_004287352.1| PREDICTED: zinc finger CCCH domain-containin... 285 2e-74
ref|XP_004508522.1| PREDICTED: zinc finger CCCH domain-containin... 285 3e-74
ref|XP_007154979.1| hypothetical protein PHAVU_003G162600g [Phas... 284 4e-74
ref|XP_006579753.1| PREDICTED: zinc finger CCCH domain-containin... 274 4e-71
ref|XP_002305494.2| hypothetical protein POPTR_0004s17670g [Popu... 268 3e-69
ref|XP_006340244.1| PREDICTED: zinc finger CCCH domain-containin... 262 2e-67
ref|XP_004251186.1| PREDICTED: zinc finger CCCH domain-containin... 262 2e-67
ref|XP_006297872.1| hypothetical protein CARUB_v10013913mg [Caps... 246 1e-62
ref|NP_566631.1| zinc finger CCCH domain-containing protein 39 [... 244 3e-62
ref|XP_002883175.1| zinc finger (CCCH-type) family protein [Arab... 244 3e-62
>ref|XP_007013371.1| Zinc finger family protein, putative isoform 1 [Theobroma cacao]
gi|590577940|ref|XP_007013372.1| Zinc finger family
protein, putative isoform 1 [Theobroma cacao]
gi|508783734|gb|EOY30990.1| Zinc finger family protein,
putative isoform 1 [Theobroma cacao]
gi|508783735|gb|EOY30991.1| Zinc finger family protein,
putative isoform 1 [Theobroma cacao]
Length = 347
Score = 345 bits (885), Expect = 2e-92
Identities = 159/257 (61%), Positives = 194/257 (75%), Gaps = 7/257 (2%)
Frame = +2
Query: 203 NEAVGFWPPVPVED---EQSVEF---PPFKKPRTSEDSPSHSAPNQNPNSRMTPPNPPIS 364
++A+G WP + D +Q EF PPFK+PR SEDS S+ NSRM P NPP++
Sbjct: 21 SDAIGIWPEFAMNDGQFDQHSEFEQQPPFKRPRHSEDSQSNVVHCLPTNSRM-PLNPPVN 79
Query: 365 KGIGRIFFKTRLCARFKAGTCPYGSNCNFAHGVEDMRKPPPNWQEIVASHGDDHRSGSWD 544
KG IFFKTR+CA+F+ GTC G CNFAHG+ED+R+PPPNWQE+V ++ SG+WD
Sbjct: 80 KGTSNIFFKTRMCAKFRLGTCRNGEGCNFAHGIEDLRQPPPNWQELVGGRDEERPSGNWD 139
Query: 545 DDQKIINRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWD 724
DDQKII+R+KLCKKFYNGEECPYG+RCNFLHEDP KFR+D GRFRESS ISIGTTG P
Sbjct: 140 DDQKIIHRMKLCKKFYNGEECPYGDRCNFLHEDPSKFRDDMGRFRESSAISIGTTGPPGG 199
Query: 725 NASGPDQADGNGVVNS-GSDANRGNVKPVFWKTRICNKWETTDHCPFGEKCHFAHGQAEL 901
+ + DQ++GN +NS SDA RGN+KPV+WKT++C KWETT HCPFGEKCHFAHGQ+EL
Sbjct: 200 HGTASDQSEGNRPLNSASSDAFRGNMKPVYWKTKLCTKWETTGHCPFGEKCHFAHGQSEL 259
Query: 902 QKFGGVTEVEAGNASIG 952
Q GG + + GN G
Sbjct: 260 QGIGGRVDGDFGNTCSG 276
>ref|XP_002524459.1| conserved hypothetical protein [Ricinus communis]
gi|223536247|gb|EEF37899.1| conserved hypothetical
protein [Ricinus communis]
Length = 341
Score = 331 bits (848), Expect = 3e-88
Identities = 159/279 (56%), Positives = 195/279 (69%), Gaps = 12/279 (4%)
Frame = +2
Query: 143 MDMSASAPPQFFDPPPYSTCNEAVGFWPPVPVEDEQSVE------FPPFKKPRTSEDSPS 304
M S S PP P Y + ++A+G WP P+ + + PPFK+PR SED+
Sbjct: 1 MSYSESQPPFMSPQPTYQSGSDAIGIWPQFPMNSNEQFDPQFDHHQPPFKRPRNSEDN-- 58
Query: 305 HSAPNQNPNSRMTPPNP-PISKGIGRIFFKTRLCARFKAGTCPYGSNCNFAHGVEDMRKP 481
NQ+ N RM PPN PI+KG IFFKTR+CA+FK G+C G NCNFAHG++DMR+P
Sbjct: 59 ----NQSMNYRMPPPNNLPINKGTTNIFFKTRMCAKFKTGSCRNGENCNFAHGMQDMRQP 114
Query: 482 PPNWQE---IVASHGDDHRSGSWDDDQKIINRLKLCKKFYNGEECPYGERCNFLHEDPGK 652
PPNWQE +V +D +G+WDDDQ+II+++KLCKKFYNGE+CPYG+RCNFLHEDP K
Sbjct: 115 PPNWQELVGVVVRGEEDRPAGNWDDDQRIIHKMKLCKKFYNGEQCPYGDRCNFLHEDPSK 174
Query: 653 FREDSGRFRESSVISIGTTGSPWDNASGPDQA--DGNGVVNSGSDANRGNVKPVFWKTRI 826
FR+D+GRFRESS ISIGTT P + SG V N+G+DA RGN+KPV+WKT++
Sbjct: 175 FRDDAGRFRESSAISIGTTAPPMMHGSGGLSVVEVNKPVNNAGADAYRGNMKPVYWKTKL 234
Query: 827 CNKWETTDHCPFGEKCHFAHGQAELQKFGGVTEVEAGNA 943
C KWETT CPFGEKCHFAHGQAELQ G E E GNA
Sbjct: 235 CTKWETTGQCPFGEKCHFAHGQAELQIPNGRAEGEVGNA 273
>ref|XP_007202316.1| hypothetical protein PRUPE_ppa008076mg [Prunus persica]
gi|462397847|gb|EMJ03515.1| hypothetical protein
PRUPE_ppa008076mg [Prunus persica]
Length = 346
Score = 325 bits (833), Expect = 2e-86
Identities = 153/271 (56%), Positives = 193/271 (71%), Gaps = 10/271 (3%)
Frame = +2
Query: 149 MSASAPPQFF-DPPPYSTCNEAVGFWPPVPVE---DEQSVEFP----PFKKPRTSEDSPS 304
M+ S QF PY+ ++AV WPP P+ ++Q +F PFK+PR SE++ S
Sbjct: 1 MNFSDQTQFMPSQTPYAGGSDAVNCWPPFPMSMNNEDQHSQFEQQPSPFKRPRNSEENQS 60
Query: 305 HSAPNQNPNSRMTPPNPPISKGIGRIFFKTRLCARFKAGTCPYGSNCNFAHGVEDMRKPP 484
+ P N+RM P N P++KG IF+KTRLC FK G C G NCN+AHG+ED+R PP
Sbjct: 61 NPMPYPPMNARMQPQNAPVNKGASNIFYKTRLCVNFKTGMCRNGENCNYAHGIEDIRHPP 120
Query: 485 PNWQEIVASHGDDHR--SGSWDDDQKIINRLKLCKKFYNGEECPYGERCNFLHEDPGKFR 658
PNWQE+V+ +D SG+WDDDQKII+R+KLCKKFYNGEECPYG+RCNFLHEDP KFR
Sbjct: 121 PNWQELVSVREEDRPPLSGNWDDDQKIIHRMKLCKKFYNGEECPYGDRCNFLHEDPAKFR 180
Query: 659 EDSGRFRESSVISIGTTGSPWDNASGPDQADGNGVVNSGSDANRGNVKPVFWKTRICNKW 838
+D RFRE++ ISIGTTG + SG + ++ N +V++G D R N+KPV+WKT++CNKW
Sbjct: 181 DDISRFRENTAISIGTTGPSVVHGSGSNHSEENRLVSTGMDTFRVNMKPVYWKTKLCNKW 240
Query: 839 ETTDHCPFGEKCHFAHGQAELQKFGGVTEVE 931
ETT CPFGEKCHFAHGQAELQ GG E E
Sbjct: 241 ETTGKCPFGEKCHFAHGQAELQVPGGRVEAE 271
>ref|XP_006450980.1| hypothetical protein CICLE_v10008851mg [Citrus clementina]
gi|568843843|ref|XP_006475808.1| PREDICTED: zinc finger
CCCH domain-containing protein 39-like isoform X1
[Citrus sinensis] gi|557554206|gb|ESR64220.1|
hypothetical protein CICLE_v10008851mg [Citrus
clementina]
Length = 338
Score = 319 bits (818), Expect = 9e-85
Identities = 159/263 (60%), Positives = 188/263 (71%), Gaps = 11/263 (4%)
Frame = +2
Query: 191 YSTCNEAVGFWPPVPVEDEQSVEF-------PPFKKPRTSEDSPSHSAPNQNPNSRMTPP 349
YS ++A+G WP + DEQ + PPFK+PR ED+ S+SA N RM P
Sbjct: 18 YSAGSDAIGVWPQFSMSDEQQYDRLSQYDQQPPFKRPRNYEDNESNSATYPPMNPRMNPS 77
Query: 350 -NPPISKGIGRIFFKTRLCARFKAGTCPYGSNCNFAHGVEDMRKPPPNWQEIVAS-HGDD 523
N PI+KGI IFFKTRLCA+FK G C G NCNFAHG+ED+R+PPPNWQE+V ++
Sbjct: 78 MNLPINKGITNIFFKTRLCAKFKHGACRNGENCNFAHGMEDLRQPPPNWQELVGGGRAEE 137
Query: 524 HRS--GSWDDDQKIINRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVIS 697
RS G+WDDDQKII+++KLCKKFYNGEECPYG+RCNFLHEDP KFR+DSGR+RESS IS
Sbjct: 138 DRSSGGNWDDDQKIIHKMKLCKKFYNGEECPYGDRCNFLHEDPAKFRDDSGRYRESSAIS 197
Query: 698 IGTTGSPWDNASGPDQADGNGVVNSGSDANRGNVKPVFWKTRICNKWETTDHCPFGEKCH 877
IGTTG P S +QA+GN V S VKPV+WKT++C KW T CPFGEKCH
Sbjct: 198 IGTTGPPVVTGSCSNQAEGNRPVGSNC------VKPVYWKTKLCIKW-TQGQCPFGEKCH 250
Query: 878 FAHGQAELQKFGGVTEVEAGNAS 946
FAHGQ+ELQ GG TE EAGN S
Sbjct: 251 FAHGQSELQVIGGRTEGEAGNPS 273
>ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
[Vitis vinifera]
Length = 349
Score = 316 bits (810), Expect = 8e-84
Identities = 152/279 (54%), Positives = 190/279 (68%), Gaps = 19/279 (6%)
Frame = +2
Query: 182 PP--PYSTCNEAVGFWPPVPVEDEQ-----SVEFPPFKKPRTSEDSPSHSAPNQNPNSRM 340
PP P+ ++ +G W P+ +E+ E+PP K+ R SE +S+P+ + N R+
Sbjct: 12 PPLHPFPVGDDDIGSWSQFPMNNEEYEVHSHFEYPPHKRTRNSEGQMPNSSPHPSMNPRI 71
Query: 341 TPPNPPISKGIGRIFFKTRLCARFKAGTCPYGSNCNFAHGVEDMRKPPPNWQEIVASHGD 520
PPN P S+G IFFKTR+CA+FK G C G NCNFAHG+EDMR+PPPNWQE+V G
Sbjct: 72 HPPNAPTSRGTSNIFFKTRICAKFKLGQCRNGENCNFAHGMEDMRQPPPNWQELVNVGGR 131
Query: 521 DHRSGS--WDDDQKIINRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVI 694
+ G+ WD+DQ+II+++KLCKKFYNGEECPYG+RCNFLHEDP KFR+DS R RES I
Sbjct: 132 EEERGTKIWDEDQRIIHKMKLCKKFYNGEECPYGDRCNFLHEDPKKFRDDSARPRESFAI 191
Query: 695 SIGTTGSPWDNAS----GPDQADGNGVVNSGSDANRGNVKPVFWKTRICNKWETTDHCPF 862
SIGTTG P ++ S G + + +NSG D RGNVKP +WKT++C KWETT HCPF
Sbjct: 192 SIGTTGPPMEHGSGSNLGSNLSSNLSSMNSGLDPFRGNVKPTYWKTKLCCKWETTGHCPF 251
Query: 863 GEKCHFAHGQAELQKF------GGVTEVEAGNASIGPSK 961
GEKCHFAHGQAELQ GG E E GN P+K
Sbjct: 252 GEKCHFAHGQAELQMTGGGGGGGGWAEAEVGNTCSLPAK 290
>ref|XP_002313732.1| zinc finger family protein [Populus trichocarpa]
gi|222850140|gb|EEE87687.1| zinc finger family protein
[Populus trichocarpa]
Length = 341
Score = 314 bits (805), Expect = 3e-83
Identities = 155/262 (59%), Positives = 193/262 (73%), Gaps = 11/262 (4%)
Frame = +2
Query: 191 YSTCNEAVGFWPPVPVEDEQSVEF--PPFKKPRTSEDSPSHSAPNQNPNSRMTPP--NPP 358
Y ++A+G WP + + + E PP+K+PR SED+P NQ+ NSR TPP N P
Sbjct: 17 YQAGSDAIGVWPQFVMNNIEQFEHHQPPYKRPRNSEDNP-----NQSVNSR-TPPTNNLP 70
Query: 359 ISKGIGRIFFKTRLCARFKAGTCPYGSNCNFAHGVEDMRKPPPNWQEIV----ASHGDDH 526
+ KG IFFKTR+CA+FK GTC G NCNFAHG++D+R+PPPNW+E+V +S D
Sbjct: 71 VHKGATNIFFKTRVCAKFKTGTCRNGENCNFAHGMQDLRQPPPNWKELVGVSVSSEEDRS 130
Query: 527 RSGSWDDDQKIINRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGT 706
+ +W+DDQ+II+++KLCKKFYNGEECPYG+RCNFLHEDP KFRED+GRFRESS ISIGT
Sbjct: 131 TATNWEDDQRIIHKMKLCKKFYNGEECPYGDRCNFLHEDPSKFREDTGRFRESSAISIGT 190
Query: 707 TGSPWDNASGP-DQADGNGVVNSG-SDANRGN-VKPVFWKTRICNKWETTDHCPFGEKCH 877
TG + SG + A+ N N+ SDA+R N +KPV+WKT++C KWE T CPFGEKCH
Sbjct: 191 TGQALGHGSGVFNAAEVNRPANNAVSDASRSNIIKPVYWKTKLCTKWEITGQCPFGEKCH 250
Query: 878 FAHGQAELQKFGGVTEVEAGNA 943
FAHG AELQ GG TEVEAGNA
Sbjct: 251 FAHGLAELQAPGGRTEVEAGNA 272
>ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
[Cucumis sativus] gi|449520655|ref|XP_004167349.1|
PREDICTED: zinc finger CCCH domain-containing protein
39-like [Cucumis sativus]
Length = 347
Score = 313 bits (802), Expect = 7e-83
Identities = 155/271 (57%), Positives = 187/271 (69%), Gaps = 15/271 (5%)
Frame = +2
Query: 182 PPP---YSTCNEAVGFWPPVPVED------EQSVEFPPFKKPRTSEDSPSHSAPNQNP-- 328
PPP Y + +A G W P D + V+ PP+K+ R SE++PS NP
Sbjct: 12 PPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENPSSPISYSNPSL 71
Query: 329 NSRMTPPNPPISKGIGRIFFKTRLCARFKAGTCPYGSNCNFAHGVEDMRKPPPNWQEIVA 508
NSR PPN P++KGI IFFKTR+CA+FK G C G++CNFAHGVEDMR+PPPNWQEIV
Sbjct: 72 NSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVG 131
Query: 509 SHGDDHRSGSWDDDQKIINRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESS 688
DD +W+DDQKII ++KLC+KFYNGEECPYG+RCNFLHEDP KFR+DSGRFRESS
Sbjct: 132 IKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESS 191
Query: 689 VISIGTTGSPWDNASGPDQADGNGVVN--SGSDANR--GNVKPVFWKTRICNKWETTDHC 856
ISIGTTG+P N + V S SDA R GNV+P FWKT++C KWE T HC
Sbjct: 192 AISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTKLCTKWEITGHC 251
Query: 857 PFGEKCHFAHGQAELQKFGGVTEVEAGNASI 949
PFG+KCHFAHGQ+ELQ + G E E A++
Sbjct: 252 PFGDKCHFAHGQSELQLYIG-REGEVSTAAL 281
>gb|EXB33953.1| Zinc finger CCCH domain-containing protein 39 [Morus notabilis]
Length = 341
Score = 310 bits (793), Expect = 7e-82
Identities = 152/261 (58%), Positives = 186/261 (71%), Gaps = 9/261 (3%)
Frame = +2
Query: 149 MSASAPPQFFDPP--PYSTCNEAVGFWPPVPVEDEQ-----SVEFPPFKKPRTSEDSPSH 307
MS S P F P Y ++A+ P +++E ++ PP+K+ R SE++ S+
Sbjct: 1 MSFSDPSSPFMPSLQSYIPGSDAINILPQFSMDNEGRNSDFDLQPPPYKRARNSEENQSN 60
Query: 308 SAPNQNPNSRMTPPNPPISKGIGRIFFKTRLCARFKAGTCPYGSNCNFAHGVEDMRKPPP 487
S P N+ M PPN P++KG IFFKTRLCA+FK G C G NCNFAHG EDMR+PP
Sbjct: 61 SLPFLPMNTIMIPPNAPVNKGTTNIFFKTRLCAKFKMGMCRNGENCNFAHGSEDMRQPPA 120
Query: 488 NWQEIVASHGDDHR--SGSWDDDQKIINRLKLCKKFYNGEECPYGERCNFLHEDPGKFRE 661
NWQE+V GD+ R SG+WDDDQKII+R+KLCKKFYNGEECPYG+RCNFLHEDP K+R+
Sbjct: 121 NWQELVGLRGDEDRISSGNWDDDQKIIHRMKLCKKFYNGEECPYGDRCNFLHEDPSKYRD 180
Query: 662 DSGRFRESSVISIGTTGSPWDNASGPDQADGNGVVNSGSDANRGNVKPVFWKTRICNKWE 841
DSGRFRESS ISIGT+ SG + D V+N+GSD RGNVKPV+WKT++CNKWE
Sbjct: 181 DSGRFRESSAISIGTS-----EPSGICE-DNKMVLNAGSDPLRGNVKPVYWKTKLCNKWE 234
Query: 842 TTDHCPFGEKCHFAHGQAELQ 904
T HCPFGEKCHFAHG A+ Q
Sbjct: 235 QTGHCPFGEKCHFAHGLADTQ 255
>ref|XP_003550830.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
[Glycine max]
Length = 347
Score = 290 bits (741), Expect = 8e-76
Identities = 139/280 (49%), Positives = 181/280 (64%), Gaps = 12/280 (4%)
Frame = +2
Query: 143 MDMSASAPPQFFDPPPYSTCNEAVGFWPPVPVEDEQSVEFPP------FKKPRTSEDSPS 304
M S P PP +ST +A+ P+ +E P FK+ RT ++S S
Sbjct: 1 MSFSDHIPSFMMSPPSFSTDTDAIEVRLQFPMNNESLEPHSPQDRPPSFKRARTCDNSLS 60
Query: 305 HSAPNQNPNSRMTPP----NPPISKGIGRIFFKTRLCARFKAGTCPYGSNCNFAHGVEDM 472
N+ PP +P ++KG IFFKTR+CA+F+ G C G NCNFAHG+EDM
Sbjct: 61 --------NAMACPPRMIQHPAVNKGTSHIFFKTRICAKFRVGACRNGENCNFAHGLEDM 112
Query: 473 RKPPPNWQEIVASHGDDH--RSGSWDDDQKIINRLKLCKKFYNGEECPYGERCNFLHEDP 646
R+PPPNWQE+V G++ +G WDDDQKII+++KLCKK+YNGEECPYG++C+FLHEDP
Sbjct: 113 RQPPPNWQELVGLRGEERPPMAGDWDDDQKIIHKMKLCKKYYNGEECPYGDKCSFLHEDP 172
Query: 647 GKFREDSGRFRESSVISIGTTGSPWDNASGPDQADGNGVVNSGSDANRGNVKPVFWKTRI 826
+FR+DS R+RES+ ISIGT GSP + + N VN+G + RGNVK +WKT++
Sbjct: 173 ARFRDDSVRYRESTSISIGTNGSPKSYGDASNNLESNRAVNTGLNVFRGNVKSTYWKTKL 232
Query: 827 CNKWETTDHCPFGEKCHFAHGQAELQKFGGVTEVEAGNAS 946
C K+ETT HCPFG+ CHFAHGQAELQ GG TE E +
Sbjct: 233 CIKFETTGHCPFGDDCHFAHGQAELQVPGGRTEAETAGVN 272
>ref|XP_003524539.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
isoform X1 [Glycine max]
Length = 345
Score = 288 bits (737), Expect = 2e-75
Identities = 140/279 (50%), Positives = 179/279 (64%), Gaps = 12/279 (4%)
Frame = +2
Query: 143 MDMSASAPPQFFDPPPYSTCNEAVGFWPPVPVEDEQ------SVEFPPFKKPRTSEDSPS 304
M S P PP +ST +A+ P +E + P FK+ RT + S S
Sbjct: 1 MSFSDHIPSFMMSPPSFSTDTDAIEVRLQFPTNNESLEPHSPQDQPPSFKRARTCDSSLS 60
Query: 305 HSAPNQNPNSRMTPP----NPPISKGIGRIFFKTRLCARFKAGTCPYGSNCNFAHGVEDM 472
N+ PP +P ++KG IFFKTR+CA+F+AG C G NCNFAHG+EDM
Sbjct: 61 --------NAMACPPRMIQHPALNKGTSHIFFKTRICAKFRAGACRNGENCNFAHGLEDM 112
Query: 473 RKPPPNWQEIVASHGDDH--RSGSWDDDQKIINRLKLCKKFYNGEECPYGERCNFLHEDP 646
R+PPPNWQE+V ++ G WDDDQKII+++KLCKK+YNGEECPYG++C+FLHEDP
Sbjct: 113 RQPPPNWQELVGLRNEERPPTMGDWDDDQKIIHKMKLCKKYYNGEECPYGDKCSFLHEDP 172
Query: 647 GKFREDSGRFRESSVISIGTTGSPWDNASGPDQADGNGVVNSGSDANRGNVKPVFWKTRI 826
+FR+DS R+RES+ ISIGT GSP + + N VN+G + RGNVK +WKT++
Sbjct: 173 ARFRDDSVRYRESTAISIGTNGSPKSYGDASNNLESNRAVNTGLNVFRGNVKSTYWKTKL 232
Query: 827 CNKWETTDHCPFGEKCHFAHGQAELQKFGGVTEVEAGNA 943
C K+ETT HCPFG+ CHFAHGQAELQ GG TE E A
Sbjct: 233 CIKFETTGHCPFGDDCHFAHGQAELQVPGGRTEAEIPGA 271
>ref|XP_004287352.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
[Fragaria vesca subsp. vesca]
Length = 335
Score = 285 bits (729), Expect = 2e-74
Identities = 136/250 (54%), Positives = 176/250 (70%), Gaps = 7/250 (2%)
Frame = +2
Query: 203 NEAVGFWPPVPVEDE-QSVEF----PPFKKPRTSEDSPSHSAPNQNPNS-RMTPPNPPIS 364
++AV WPP+ + +E Q +F PPFK+PR SE+ S+ P N+ R+ P N P++
Sbjct: 20 SDAVNCWPPIAMNNEDQHSQFEQQGPPFKRPRNSEEPQSNPMPYPPMNNARLPPSNAPVN 79
Query: 365 KGIGRIFFKTRLCARFKAGTCPYGSNCNFAHGVEDMRKPPPNWQEIVASHGDDHR-SGSW 541
+G IF+KTRLCA FK G+C G NCN+AHG++D+R+PPPNWQE+V +D +G+W
Sbjct: 80 RGANNIFYKTRLCANFKNGSCRNGENCNYAHGIDDIRQPPPNWQELVTVRDEDRPLTGNW 139
Query: 542 DDDQKIINRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPW 721
+DDQKII+R+KLCKKF NGEECPYG+RCNF HE+P KFREDS R+RE++ ISIGTTG+P
Sbjct: 140 EDDQKIIHRMKLCKKFNNGEECPYGDRCNFRHEEPAKFREDSSRYRENAAISIGTTGAPM 199
Query: 722 DNASGPDQADGNGVVNSGSDANRGNVKPVFWKTRICNKWETTDHCPFGEKCHFAHGQAEL 901
+AS + N+G + KP +WKT+ICNKWE T CPFGEKCHFAHGQ EL
Sbjct: 200 PHASSTSLEENR--PNTGINTFLVTPKP-YWKTKICNKWEQTGKCPFGEKCHFAHGQEEL 256
Query: 902 QKFGGVTEVE 931
Q G E E
Sbjct: 257 QAPGMRVEAE 266
>ref|XP_004508522.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
isoform X1 [Cicer arietinum]
gi|502151605|ref|XP_004508523.1| PREDICTED: zinc finger
CCCH domain-containing protein 39-like isoform X2 [Cicer
arietinum]
Length = 328
Score = 285 bits (728), Expect = 3e-74
Identities = 138/279 (49%), Positives = 173/279 (62%), Gaps = 4/279 (1%)
Frame = +2
Query: 143 MDMSASAPPQFFDPPPYSTCNEAVGFWPPVPVEDEQSVEFPPFKKPRTSEDSPSHSAPNQ 322
M + P PP ++T ++ + P P+ ++ + P FK+ R S+ N
Sbjct: 1 MTFPDNIPTFRMSPPHFATNSDVIEVRPQFPMNNQHFDQPPSFKRARISD--------NN 52
Query: 323 NPNSRMTPPNPPISKGIGRIFFKTRLCARFKAGTCPYGSNCNFAHGVEDMRKPPPNWQEI 502
+P M PP +KG IFFKTR+C +FK G+C G NCNFAHGVED+RKPPPNWQE+
Sbjct: 53 HPPRMMV--QPPSNKGTSHIFFKTRICVKFKLGSCRNGENCNFAHGVEDIRKPPPNWQEL 110
Query: 503 VASHGDDHR----SGSWDDDQKIINRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSG 670
V S D+ +G+WDDDQKII+++KLCKKFYNGEECPYG++CNFLHEDP KFR+DS
Sbjct: 111 VGSRNDEQLHALVAGNWDDDQKIIHKMKLCKKFYNGEECPYGDKCNFLHEDPAKFRDDSR 170
Query: 671 RFRESSVISIGTTGSPWDNASGPDQADGNGVVNSGSDANRGNVKPVFWKTRICNKWETTD 850
RES+ ISIGT GSP G + DGN VN K +WKT++C KWE T
Sbjct: 171 NSRESTTISIGTNGSPKSYGDGTNNLDGNRAVNK-------QTKGTYWKTKLCLKWEHTG 223
Query: 851 HCPFGEKCHFAHGQAELQKFGGVTEVEAGNASIGPSKHI 967
HCPFG+ CHFAHG ELQ FGG E E A +K I
Sbjct: 224 HCPFGDDCHFAHGLEELQAFGGRVEAEIAGAVANSTKAI 262
>ref|XP_007154979.1| hypothetical protein PHAVU_003G162600g [Phaseolus vulgaris]
gi|561028333|gb|ESW26973.1| hypothetical protein
PHAVU_003G162600g [Phaseolus vulgaris]
Length = 344
Score = 284 bits (726), Expect = 4e-74
Identities = 137/270 (50%), Positives = 180/270 (66%), Gaps = 7/270 (2%)
Frame = +2
Query: 143 MDMSASAPPQFFDPPPYSTCNEAVGFWPPVPVEDE------QSVEFPPFKKPRTSEDSPS 304
M S P PP +ST ++A+ P+ +E + P FK+ R +++ S
Sbjct: 1 MSFSDHIPSFMMSPPSFSTDSDAIEVRLQFPMNNELLGPHSPQDQPPSFKRARIGDNNHS 60
Query: 305 HSAPNQNPNSRMTPPNPPISKGIGRIFFKTRLCARFKAGTCPYGSNCNFAHGVEDMRKPP 484
++ R+T NP +KG IFFKTR+CA+F+ G C G NCNFAHGVEDMR+PP
Sbjct: 61 YAMACP---PRVTQ-NPGFNKGTSHIFFKTRMCAKFRIGACRNGENCNFAHGVEDMRQPP 116
Query: 485 PNWQEIVASHGDDHR-SGSWDDDQKIINRLKLCKKFYNGEECPYGERCNFLHEDPGKFRE 661
PNWQ++V ++ SG+WDDDQKII ++KLCKK+YNGEECPYG++C+FLHEDP KFR+
Sbjct: 117 PNWQDLVGLRNEERLPSGNWDDDQKIIQKMKLCKKYYNGEECPYGDKCSFLHEDPAKFRD 176
Query: 662 DSGRFRESSVISIGTTGSPWDNASGPDQADGNGVVNSGSDANRGNVKPVFWKTRICNKWE 841
DSGR+RES+ ISIGT GSP + + N VN+G + +R NVK +WKT++C K+E
Sbjct: 177 DSGRYRESTAISIGTNGSPKAYGDPSNYLESNRAVNTGLNVSRPNVKSTYWKTKLCIKFE 236
Query: 842 TTDHCPFGEKCHFAHGQAELQKFGGVTEVE 931
TT HCPFG+ CHFAHGQAELQ GG E E
Sbjct: 237 TTGHCPFGDDCHFAHGQAELQFPGGRNEAE 266
>ref|XP_006579753.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
isoform X2 [Glycine max]
Length = 283
Score = 274 bits (700), Expect = 4e-71
Identities = 120/200 (60%), Positives = 151/200 (75%), Gaps = 2/200 (1%)
Frame = +2
Query: 350 NPPISKGIGRIFFKTRLCARFKAGTCPYGSNCNFAHGVEDMRKPPPNWQEIVASHGDDH- 526
+P ++KG IFFKTR+CA+F+AG C G NCNFAHG+EDMR+PPPNWQE+V ++
Sbjct: 10 HPALNKGTSHIFFKTRICAKFRAGACRNGENCNFAHGLEDMRQPPPNWQELVGLRNEERP 69
Query: 527 -RSGSWDDDQKIINRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIG 703
G WDDDQKII+++KLCKK+YNGEECPYG++C+FLHEDP +FR+DS R+RES+ ISIG
Sbjct: 70 PTMGDWDDDQKIIHKMKLCKKYYNGEECPYGDKCSFLHEDPARFRDDSVRYRESTAISIG 129
Query: 704 TTGSPWDNASGPDQADGNGVVNSGSDANRGNVKPVFWKTRICNKWETTDHCPFGEKCHFA 883
T GSP + + N VN+G + RGNVK +WKT++C K+ETT HCPFG+ CHFA
Sbjct: 130 TNGSPKSYGDASNNLESNRAVNTGLNVFRGNVKSTYWKTKLCIKFETTGHCPFGDDCHFA 189
Query: 884 HGQAELQKFGGVTEVEAGNA 943
HGQAELQ GG TE E A
Sbjct: 190 HGQAELQVPGGRTEAEIPGA 209
>ref|XP_002305494.2| hypothetical protein POPTR_0004s17670g [Populus trichocarpa]
gi|550341257|gb|EEE86005.2| hypothetical protein
POPTR_0004s17670g [Populus trichocarpa]
Length = 282
Score = 268 bits (684), Expect = 3e-69
Identities = 131/219 (59%), Positives = 161/219 (73%), Gaps = 8/219 (3%)
Frame = +2
Query: 329 NSRMTPPNP-PISKGIGRIFFKTRLCARFKAGTCPYGSNCNFAHGVEDMRKPPPNWQEIV 505
+SR+ P N P+ KG IFFKTR+CA+FK GTC G NCNFAHG++D+R+PPPNW+E+V
Sbjct: 2 SSRVPPTNSLPVHKGTTNIFFKTRVCAKFKTGTCRNGENCNFAHGMQDLRQPPPNWKELV 61
Query: 506 A----SHGDDHRSGSWDDDQKIINRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGR 673
+ S D + + +DD +II+++KLCKKFYNGEECPYG+RCNFLHEDP FRED+GR
Sbjct: 62 SVGVSSEDDRSTATNREDDLRIIHKMKLCKKFYNGEECPYGDRCNFLHEDPANFREDTGR 121
Query: 674 FRESSVISIGTTGSPWDNASGP-DQADGNGVVNSG-SDANRGN-VKPVFWKTRICNKWET 844
FRESS ISIGTT SG + A+ N N+ SDA R N +KPV+WKT++C KWE
Sbjct: 122 FRESSAISIGTTDHLMGQGSGIFNAAEVNRPANNAVSDAPRSNLIKPVYWKTKLCTKWEM 181
Query: 845 TDHCPFGEKCHFAHGQAELQKFGGVTEVEAGNASIGPSK 961
T CPFGEKCHFAHG AELQ GG TEV+AGNA +K
Sbjct: 182 TGQCPFGEKCHFAHGLAELQVPGGRTEVDAGNAGSNVTK 220
>ref|XP_006340244.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
isoform X1 [Solanum tuberosum]
gi|565346403|ref|XP_006340245.1| PREDICTED: zinc finger
CCCH domain-containing protein 39-like isoform X2
[Solanum tuberosum]
Length = 341
Score = 262 bits (669), Expect = 2e-67
Identities = 129/261 (49%), Positives = 168/261 (64%), Gaps = 6/261 (2%)
Frame = +2
Query: 167 PQFFDPPPYSTCNEAVGFWPPVPVEDE------QSVEFPPFKKPRTSEDSPSHSAPNQNP 328
P F P+ +A WP + E Q PPFK+ R + + ++A
Sbjct: 18 PSHFMQMPF-VGGDAGDVWPHSSMNHELFESYSQFEHAPPFKRMREFDSNSPNAAAFSAM 76
Query: 329 NSRMTPPNPPISKGIGRIFFKTRLCARFKAGTCPYGSNCNFAHGVEDMRKPPPNWQEIVA 508
NSR+ PPN P SKG IF+KTR+CA+F GTC G +C FAHGVED+R+PPPNWQ++V
Sbjct: 77 NSRVNPPNLPGSKGTSHIFYKTRMCAKFLEGTCRNGEHCTFAHGVEDLREPPPNWQDLVR 136
Query: 509 SHGDDHRSGSWDDDQKIINRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESS 688
D + +W+DDQKII+R+K+CKKFYNGEECPYG++CNFLHE P KF+ D R RESS
Sbjct: 137 EK--DRGAENWNDDQKIIHRMKICKKFYNGEECPYGDKCNFLHERPPKFKTDMPRHRESS 194
Query: 689 VISIGTTGSPWDNASGPDQADGNGVVNSGSDANRGNVKPVFWKTRICNKWETTDHCPFGE 868
ISIGTTG+ D GN +D++ +KPV+WKT+IC+KWETT CPF +
Sbjct: 195 AISIGTTGNRCDTELIEISKHGN------ADSDAVRIKPVYWKTKICSKWETTGQCPFRD 248
Query: 869 KCHFAHGQAELQKFGGVTEVE 931
+CHFAHGQ+ELQ G E++
Sbjct: 249 RCHFAHGQSELQMPTGRVEMD 269
>ref|XP_004251186.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
[Solanum lycopersicum]
Length = 341
Score = 262 bits (669), Expect = 2e-67
Identities = 122/223 (54%), Positives = 157/223 (70%)
Frame = +2
Query: 263 PPFKKPRTSEDSPSHSAPNQNPNSRMTPPNPPISKGIGRIFFKTRLCARFKAGTCPYGSN 442
PPFK+ R + + +SA NSR+ PPN P SKG IF+KTR+CA+F GTC G +
Sbjct: 55 PPFKRMREFDSNSPNSAAFSAINSRVNPPNLPGSKGTSHIFYKTRMCAKFLEGTCRNGEH 114
Query: 443 CNFAHGVEDMRKPPPNWQEIVASHGDDHRSGSWDDDQKIINRLKLCKKFYNGEECPYGER 622
C FAHGVED+R+PPPNWQ++V D + +W+DDQKII+R+K+CKKFYNGEECPYG++
Sbjct: 115 CTFAHGVEDLREPPPNWQDLVREK--DRGAENWNDDQKIIHRMKICKKFYNGEECPYGDK 172
Query: 623 CNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNASGPDQADGNGVVNSGSDANRGNVK 802
CNFLHE P KF+ D R RESS ISIGTTG+ D GN +D++ +K
Sbjct: 173 CNFLHERPPKFKTDMPRHRESSAISIGTTGNRCDTELIEISKHGN------ADSDAVRIK 226
Query: 803 PVFWKTRICNKWETTDHCPFGEKCHFAHGQAELQKFGGVTEVE 931
PV+WKT+IC+KWETT CPF ++CHFAHGQ+ELQ G E++
Sbjct: 227 PVYWKTKICSKWETTGQCPFRDRCHFAHGQSELQMPTGRVEMD 269
>ref|XP_006297872.1| hypothetical protein CARUB_v10013913mg [Capsella rubella]
gi|565480466|ref|XP_006297873.1| hypothetical protein
CARUB_v10013913mg [Capsella rubella]
gi|482566581|gb|EOA30770.1| hypothetical protein
CARUB_v10013913mg [Capsella rubella]
gi|482566582|gb|EOA30771.1| hypothetical protein
CARUB_v10013913mg [Capsella rubella]
Length = 387
Score = 246 bits (627), Expect = 1e-62
Identities = 127/263 (48%), Positives = 160/263 (60%), Gaps = 30/263 (11%)
Frame = +2
Query: 263 PPFKKPRTSEDS---PSHSAPNQNPNSRMTPPN---PPISKGIGRIFFKTRLCARFKAGT 424
P K+PR +D+ P+ S P ++ P+ PP++KG IF+KTR+CA+F+AGT
Sbjct: 58 PSLKRPRLVDDNVFNPASSFPPPTSSNPWMVPSLNPPPVNKGTANIFYKTRMCAKFRAGT 117
Query: 425 CPYGSNCNFAHGVEDMRKPPPNWQEIVASHGDDHR------------------SGSWDDD 550
C G CNFAHG+ED+R+PP NWQEIV G D + +W+DD
Sbjct: 118 CRNGELCNFAHGIEDLRQPPSNWQEIVGPPGQDRDRERERERERERPSLAPVGNNNWEDD 177
Query: 551 QKIINRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGSPWDNA 730
QKII R+KLC+KF GEECPYG+RCNF+HED KFREDSG+ RESSVIS+GTT + +
Sbjct: 178 QKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGTTAADLQSV 237
Query: 731 SGPDQADGNGVVNSGSDA------NRGNVKPVFWKTRICNKWETTDHCPFGEKCHFAHGQ 892
++ V GS N G VK V+WKTR+C K+E T CPFG+KCHFAHGQ
Sbjct: 238 DNSTASNHIEVSRQGSIPVPVPMNNGGAVKTVYWKTRLCMKFEITGQCPFGDKCHFAHGQ 297
Query: 893 AELQKFGGVTEVEAGNASIGPSK 961
AEL G E EA N SK
Sbjct: 298 AELHNSVGRVEGEAVNGVASLSK 320
>ref|NP_566631.1| zinc finger CCCH domain-containing protein 39 [Arabidopsis
thaliana] gi|75274079|sp|Q9LT81.1|C3H39_ARATH RecName:
Full=Zinc finger CCCH domain-containing protein 39;
Short=AtC3H39 gi|11994458|dbj|BAB02460.1| unnamed
protein product [Arabidopsis thaliana]
gi|14335094|gb|AAK59826.1| AT3g19360/MLD14_8
[Arabidopsis thaliana] gi|19548069|gb|AAL87398.1|
AT3g19360/MLD14_8 [Arabidopsis thaliana]
gi|332642708|gb|AEE76229.1| zinc finger CCCH
domain-containing protein 39 [Arabidopsis thaliana]
Length = 386
Score = 244 bits (624), Expect = 3e-62
Identities = 127/262 (48%), Positives = 164/262 (62%), Gaps = 29/262 (11%)
Frame = +2
Query: 263 PPFKKPRTSEDS---PSHSAPNQNPNSRMTPPN---PPISKGIGRIFFKTRLCARFKAGT 424
P K+PR +D+ P+ S P + ++ P+ PP++KG IF+KTR+CA+F+AGT
Sbjct: 58 PALKRPRLVDDNLFNPASSFPQPSSSNPWMVPSLNPPPVNKGTANIFYKTRMCAKFRAGT 117
Query: 425 CPYGSNCNFAHGVEDMRKPPPNWQEIVASH--GDDHR------------------SGSWD 544
C G CNFAHG+ED+R+PP NWQEIV G D + +W+
Sbjct: 118 CRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRERERERERERERPSLAPVVNNNWE 177
Query: 545 DDQKIINRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGS--P 718
DDQKII R+KLC+KF GEECPYG+RCNF+HED KFREDSG+ RESSVIS+G T + P
Sbjct: 178 DDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQP 237
Query: 719 WDNASGPDQADGNGVVNSGSDANRGN-VKPVFWKTRICNKWETTDHCPFGEKCHFAHGQA 895
D AS + + G + + N G VK V+WKTR+C K++ T CPFG+KCHFAHGQA
Sbjct: 238 SDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQA 297
Query: 896 ELQKFGGVTEVEAGNASIGPSK 961
EL G E EA NA +K
Sbjct: 298 ELHNSVGRVEGEAMNAVASVNK 319
>ref|XP_002883175.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata] gi|297329015|gb|EFH59434.1| zinc finger
(CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 389
Score = 244 bits (624), Expect = 3e-62
Identities = 125/263 (47%), Positives = 164/263 (62%), Gaps = 30/263 (11%)
Frame = +2
Query: 263 PPFKKPRTSEDS---PSHSAPNQNPNSRMTPPN---PPISKGIGRIFFKTRLCARFKAGT 424
P K+PR +D+ P+ S P + ++ P+ PP++KG IF+KTR+CA+F+AGT
Sbjct: 60 PALKRPRLVDDNVFNPASSFPQPSSSNPWMVPSLNPPPVNKGTANIFYKTRMCAKFRAGT 119
Query: 425 CPYGSNCNFAHGVEDMRKPPPNWQEIVASHGDDHR---------------------SGSW 541
C G CNFAHG+ED+R+PP NWQEIV R + +W
Sbjct: 120 CRNGELCNFAHGIEDLRQPPSNWQEIVGPPPGQDREKERERERERERERPSLAPVANNNW 179
Query: 542 DDDQKIINRLKLCKKFYNGEECPYGERCNFLHEDPGKFREDSGRFRESSVISIGTTGS-- 715
+DDQKII R+KLC+KF GEECPYG+RCNF+HED KFREDSG+ RESSVIS+GT+ +
Sbjct: 180 EDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGTSAADP 239
Query: 716 PWDNASGPDQADGNGVVNSGSDANRGN-VKPVFWKTRICNKWETTDHCPFGEKCHFAHGQ 892
P D AS + + G + + N G VK V+WKTR+C K++ T CPFG+KCHFAHGQ
Sbjct: 240 PSDTASNHIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQ 299
Query: 893 AELQKFGGVTEVEAGNASIGPSK 961
EL G + EA NA+ SK
Sbjct: 300 TELHNSVGRVDGEAVNATASVSK 322