BLASTX nr result
ID: Sinomenium21_contig00024541
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00024541
(918 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006833259.1| hypothetical protein AMTR_s00113p00130020 [A... 48 9e-09
ref|XP_007035546.1| Tetratricopeptide repeat-like superfamily pr... 50 3e-08
ref|XP_007213206.1| hypothetical protein PRUPE_ppb012387mg [Prun... 57 3e-08
gb|EXC30917.1| hypothetical protein L484_028099 [Morus notabilis] 52 4e-08
ref|XP_006841618.1| hypothetical protein AMTR_s00003p00222920 [A... 43 6e-08
ref|XP_004144516.1| PREDICTED: pentatricopeptide repeat-containi... 45 1e-07
ref|XP_006574752.1| PREDICTED: pentatricopeptide repeat-containi... 43 2e-07
ref|XP_004240647.1| PREDICTED: pentatricopeptide repeat-containi... 39 2e-07
ref|XP_006355831.1| PREDICTED: pentatricopeptide repeat-containi... 40 2e-07
gb|EXB55980.1| hypothetical protein L484_018766 [Morus notabilis] 41 3e-07
ref|XP_002519063.1| pentatricopeptide repeat-containing protein,... 53 3e-07
ref|XP_006299919.1| hypothetical protein CARUB_v10016128mg [Caps... 45 4e-07
ref|XP_006479937.1| PREDICTED: pentatricopeptide repeat-containi... 45 4e-07
ref|XP_002526753.1| pentatricopeptide repeat-containing protein,... 48 5e-07
dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare] 45 6e-07
ref|XP_006285896.1| hypothetical protein CARUB_v10007408mg [Caps... 49 6e-07
dbj|BAK07038.1| predicted protein [Hordeum vulgare subsp. vulgare] 45 6e-07
ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containi... 54 6e-07
ref|XP_004167548.1| PREDICTED: pentatricopeptide repeat-containi... 54 6e-07
ref|XP_006347148.1| PREDICTED: pentatricopeptide repeat-containi... 42 7e-07
>ref|XP_006833259.1| hypothetical protein AMTR_s00113p00130020 [Amborella trichopoda]
gi|548837918|gb|ERM98537.1| hypothetical protein
AMTR_s00113p00130020 [Amborella trichopoda]
Length = 474
Score = 47.8 bits (112), Expect(2) = 9e-09
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +2
Query: 584 KANRYIHAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMIS 760
K + +HA ++ G L DNL L N +L MY +S+ A ++F+ M +G I+WN MIS
Sbjct: 181 KPGKQVHAQIIVLG-LSDNLTLSNGILGMYGTCRSMYDACRVFNGMPFRGLISWNAMIS 238
Score = 39.3 bits (90), Expect(2) = 9e-09
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Frame = +1
Query: 355 RFTVLMTALMDFNLKCP*YCLTKCLRE--------TW-----GHEPL*LLATQGSLKLFR 495
+F +L+T L+D ++KC + E +W GH + +LKLF+
Sbjct: 96 QFMLLVTTLLDLHVKCSDLAAACQIFEEMPERDVVSWTSLIVGH--VHQSKHNMALKLFQ 153
Query: 496 TTISTGTTIPSAHSFSGNLASCSGLQALKQGQQIH 600
++ G +++++SG L++CSGL ALK G+Q+H
Sbjct: 154 K-MNKGNARGNSYTYSGLLSACSGLMALKPGKQVH 187
>ref|XP_007035546.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508714575|gb|EOY06472.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 648
Score = 50.4 bits (119), Expect(3) = 3e-08
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +2
Query: 584 KANRYIHAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMISG 763
K + IHAHV + GF NLV+ ++L+ MY + +G AR++F+SM K ++W MI+
Sbjct: 188 KTGKQIHAHVQSFGFQC-NLVVCSSLVDMYGKCNEVGLARRVFESMECKNVVSWTSMITA 246
Query: 764 VKVN 775
N
Sbjct: 247 CAQN 250
Score = 29.6 bits (65), Expect(3) = 3e-08
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 511 GTTIPSAHSFSGNLASCSGLQALKQGQQIH 600
GT +P+ +F+ + +CS L LK G+QIH
Sbjct: 165 GTVLPNEFTFATAVNACSILADLKTGKQIH 194
Score = 24.6 bits (52), Expect(3) = 3e-08
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 411 LFDEMLERDVGS*TSMIVGYAGL 479
LFDEM E +V S TS++ GY +
Sbjct: 127 LFDEMPEPNVVSYTSLMSGYVNV 149
>ref|XP_007213206.1| hypothetical protein PRUPE_ppb012387mg [Prunus persica]
gi|462409071|gb|EMJ14405.1| hypothetical protein
PRUPE_ppb012387mg [Prunus persica]
Length = 588
Score = 57.0 bits (136), Expect(2) = 3e-08
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = +2
Query: 584 KANRYIHAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMISG 763
+ R +H+HVL G+ D+ V Q L+ +YS+S + ARKLFD M + +AWN MISG
Sbjct: 131 RLGRCVHSHVLVCGYGSDSFV-QAALVTLYSKSGDLDAARKLFDKMPERSVVAWNSMISG 189
Query: 764 VKVN 775
+ N
Sbjct: 190 YEQN 193
Score = 28.5 bits (62), Expect(2) = 3e-08
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +1
Query: 523 PSAHSFSGNLASCSGLQALKQGQQIHT 603
PS++SF+ + SC+ + AL+ G+ +H+
Sbjct: 112 PSSYSFTSVIKSCADISALRLGRCVHS 138
>gb|EXC30917.1| hypothetical protein L484_028099 [Morus notabilis]
Length = 706
Score = 51.6 bits (122), Expect(3) = 4e-08
Identities = 25/57 (43%), Positives = 40/57 (70%)
Frame = +2
Query: 593 RYIHAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMISG 763
R +H+HVL S + +VLQN+L+ MYS+ ++ +R++FDSMT + I+WN M+ G
Sbjct: 233 RQVHSHVLRSK-VPTFIVLQNSLIDMYSKCGNLAYSRRVFDSMTERSVISWNAMLVG 288
Score = 30.0 bits (66), Expect(3) = 4e-08
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +1
Query: 478 SLKLFRTTISTGTTIPSAHSFSGNLASCSGLQALKQGQQIHT 603
+L+LFR + G +P+ +++ L + SGL AL G+Q+H+
Sbjct: 197 ALELFRQLLREGM-VPNHVTYASLLTALSGLAALDLGRQVHS 237
Score = 22.3 bits (46), Expect(3) = 4e-08
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 411 LFDEMLERDVGS*TSMIVGYAGL 479
+F + ERDV S T++I GYA L
Sbjct: 169 VFTCLPERDVVSCTAIISGYAQL 191
>ref|XP_006841618.1| hypothetical protein AMTR_s00003p00222920 [Amborella trichopoda]
gi|548843639|gb|ERN03293.1| hypothetical protein
AMTR_s00003p00222920 [Amborella trichopoda]
Length = 578
Score = 42.7 bits (99), Expect(3) = 6e-08
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +2
Query: 584 KANRYIHAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMI 757
K +HA ++ G LG+ + L N L+ MY++ SI +RK+FD M + ++W M+
Sbjct: 303 KCGEQVHACIIQKG-LGNCIALSNTLVDMYAKCGSIPFSRKIFDEMLERDFVSWTSMM 359
Score = 32.3 bits (72), Expect(3) = 6e-08
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 478 SLKLFRTTISTGTTIPSAHSFSGNLASCSGLQALKQGQQIHTC 606
SLK+F+ + G P +++F+ ++ C LK G+Q+H C
Sbjct: 270 SLKMFKL-MGIGNLKPDSYTFTSVISFCGTQSVLKCGEQVHAC 311
Score = 28.5 bits (62), Expect(3) = 6e-08
Identities = 39/157 (24%), Positives = 60/157 (38%), Gaps = 18/157 (11%)
Frame = +3
Query: 54 IYFGYQSHD*GEKRVSMQRIVPCKTNYKTKMMIHKTKLPNHLITTPTISITTKRYLFAHY 233
I FGY+ D + + + C +++K + K N + T IS T+R L H
Sbjct: 113 IKFGYE--DSYTENALLDMYIKCNRFHESKSLFSYMKWTNVISWTTMISGCTQRGL--HR 168
Query: 234 SSTSILLPCPESKQHLANPDDYAHVNALKEPPSS--------------QCSTRGQIHCVD 371
+ + L E +Q N D + L S +C + +
Sbjct: 169 EAIGLFL---EMRQDSTNVDSFVCSATLVACGSLGSLILGTMIHALVIKCGVGSSLILAN 225
Query: 372 DSVDGLQPQMSVI----LFDEMLERDVGS*TSMIVGY 470
VD ++I LFDEM RD+ S +MI GY
Sbjct: 226 SIVDMYAKCWNMIEAHRLFDEMPRRDLVSWNTMISGY 262
>ref|XP_004144516.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449515851|ref|XP_004164961.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 308
Score = 45.4 bits (106), Expect(2) = 1e-07
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = +2
Query: 584 KANRYIHAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMISG 763
+ R +H +L +GF D L N L+ MY + +G ARK+FD M + ++W+ +++G
Sbjct: 126 RLGRQVHGALLINGFSAD-LPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAG 184
Query: 764 VKVN 775
V+
Sbjct: 185 YGVH 188
Score = 38.1 bits (87), Expect(2) = 1e-07
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Frame = +1
Query: 322 NHHHLSVQLVGRFTVLM-----TALMDFNLKCP*YCLTKCLRETWGHEPL*LLATQGSLK 486
+HH + +L + T + F + P Y +R H L L + SL
Sbjct: 41 HHHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNTLIR---AHSSLRLFSQ--SLS 95
Query: 487 LFRTTISTGTTIPSAHSFSGNLASCSGLQALKQGQQIH 600
+FR + +G +I H+ L SC+GL +L+ G+Q+H
Sbjct: 96 IFRHMLLSGKSI-DRHTLPPVLKSCTGLSSLRLGRQVH 132
>ref|XP_006574752.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like isoform X1 [Glycine max]
gi|571439084|ref|XP_006574753.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X2 [Glycine max]
gi|571439086|ref|XP_006574754.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X3 [Glycine max]
gi|571439088|ref|XP_006574755.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X4 [Glycine max]
gi|571439090|ref|XP_006574756.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X5 [Glycine max]
Length = 1082
Score = 42.7 bits (99), Expect(3) = 2e-07
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +2
Query: 599 IHAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMISG 763
IHA SG+ D+L + N L+ +Y+R + A FD + +K NI+WN +ISG
Sbjct: 631 IHAQACVSGY-SDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISG 684
Score = 34.7 bits (78), Expect(3) = 2e-07
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 538 FSGNLASCSGLQALKQGQQIHTCPC 612
F+ +++C+G+QAL QGQQIH C
Sbjct: 612 FASAISACAGIQALNQGQQIHAQAC 636
Score = 24.6 bits (52), Expect(3) = 2e-07
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 411 LFDEMLERDVGS*TSMIVGYA 473
+F + E+DV S T+MI GYA
Sbjct: 565 IFRRLKEKDVVSWTAMIAGYA 585
>ref|XP_004240647.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Solanum lycopersicum]
Length = 630
Score = 38.9 bits (89), Expect(3) = 2e-07
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +2
Query: 599 IHAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMISG 763
+H +L SGF D +VL +LL MY++ I A +F+S+ + +AWN +I G
Sbjct: 302 VHVCILKSGFPLD-VVLLTSLLDMYAKCGDIEVAFCIFESIPARNLVAWNSIIGG 355
Score = 35.0 bits (79), Expect(3) = 2e-07
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +1
Query: 478 SLKLFRTTISTGTTIPSAHSFSGNLASCSGLQALKQGQQIHTC 606
+LKLF+ +++G+ P+ +FS L +C+G A+ G Q+H C
Sbjct: 264 ALKLFKLMLNSGSR-PNHFTFSTVLDACAGYSAVLVGNQVHVC 305
Score = 27.7 bits (60), Expect(3) = 2e-07
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 411 LFDEMLERDVGS*TSMIVGY 470
+FDEM E+DV S T+MI GY
Sbjct: 236 VFDEMSEKDVVSWTAMIRGY 255
>ref|XP_006355831.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Solanum tuberosum]
Length = 529
Score = 40.4 bits (93), Expect(3) = 2e-07
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +2
Query: 599 IHAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMISG 763
+HA +L SGF D +VL +LL MY++ I A +F+S+ + +AWN +I G
Sbjct: 302 VHACILKSGFPLD-VVLLTSLLDMYAKCGDIEVAFCIFESIPARNLVAWNSIIGG 355
Score = 35.0 bits (79), Expect(3) = 2e-07
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +1
Query: 478 SLKLFRTTISTGTTIPSAHSFSGNLASCSGLQALKQGQQIHTC 606
+LKLF+ +++G+ P+ +FS L +C+G A+ G Q+H C
Sbjct: 264 ALKLFKLMLNSGSR-PNHFTFSTVLDACAGYSAVLVGNQVHAC 305
Score = 26.2 bits (56), Expect(3) = 2e-07
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 411 LFDEMLERDVGS*TSMIVGY 470
+FD+M E+DV S T+MI GY
Sbjct: 236 VFDKMSEKDVVSWTAMIRGY 255
>gb|EXB55980.1| hypothetical protein L484_018766 [Morus notabilis]
Length = 522
Score = 40.8 bits (94), Expect(3) = 3e-07
Identities = 18/55 (32%), Positives = 35/55 (63%)
Frame = +2
Query: 599 IHAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMISG 763
+H+ +L SG + D +V+ ++L+ MY++ + A +FD+M K ++WN +I G
Sbjct: 294 VHSSILKSG-VPDGIVMSSSLVDMYAKCGDVDVALCVFDAMPHKNVVSWNSIIGG 347
Score = 32.3 bits (72), Expect(3) = 3e-07
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +1
Query: 478 SLKLFRTTISTGTTIPSAHSFSGNLASCSGLQALKQGQQIHT 603
+L+LF + +GT P+ +FS L +C+G +L GQQ+H+
Sbjct: 256 ALQLFAWMLRSGTR-PNDFTFSSVLGACAGCCSLLTGQQVHS 296
Score = 28.1 bits (61), Expect(3) = 3e-07
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 378 VDGLQPQMSVILFDEMLERDVGS*TSMIVGYAGLTQAVQNHDF 506
+D + + + +FD M ER+V S T+MI GY VQNH F
Sbjct: 217 IDNKKIKKARTVFDRMGERNVISWTAMINGY------VQNHYF 253
>ref|XP_002519063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541726|gb|EEF43274.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 386
Score = 53.1 bits (126), Expect(2) = 3e-07
Identities = 25/64 (39%), Positives = 41/64 (64%)
Frame = +2
Query: 584 KANRYIHAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMISG 763
K + +H HVL +GF G ++ +Q L+ Y++S +G ARK+FD M + ++WN +ISG
Sbjct: 128 KLGKVVHGHVLVNGF-GLDVYVQAALVACYAKSGDLGNARKVFDKMRERSVVSWNSIISG 186
Query: 764 VKVN 775
+ N
Sbjct: 187 YEQN 190
Score = 28.9 bits (63), Expect(2) = 3e-07
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 523 PSAHSFSGNLASCSGLQALKQGQQIH 600
PSA++F+ + SC+ L +LK G+ +H
Sbjct: 109 PSAYTFTSIVKSCADLSSLKLGKVVH 134
>ref|XP_006299919.1| hypothetical protein CARUB_v10016128mg [Capsella rubella]
gi|482568628|gb|EOA32817.1| hypothetical protein
CARUB_v10016128mg [Capsella rubella]
Length = 634
Score = 45.4 bits (106), Expect(4) = 4e-07
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = +2
Query: 602 HAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMISG 763
H HVL L VLQN+L+ MYS+ ++ AR+LFD+M + +++WN M+ G
Sbjct: 283 HCHVLRRE-LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMLERTSVSWNAMLVG 335
Score = 26.2 bits (56), Expect(4) = 4e-07
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 411 LFDEMLERDVGS*TSMIVGYAGL 479
+FD + ERDV S T++I GYA L
Sbjct: 216 IFDCLPERDVVSCTAIIAGYAQL 238
Score = 25.4 bits (54), Expect(4) = 4e-07
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 478 SLKLFRTTISTGTTIPSAHSFSGNLASCSGLQALKQGQQIH 600
+L+ F+ +S G T P+ +++ L + SGL + G+Q H
Sbjct: 244 ALETFQRLLSEGMT-PNYVTYASLLTALSGLALIDHGKQAH 283
Score = 22.3 bits (46), Expect(4) = 4e-07
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 805 IEDDDVQLLANITGCSVGK 861
++ D V LLA ++GCS G+
Sbjct: 358 VKPDAVTLLAVLSGCSHGR 376
>ref|XP_006479937.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like isoform X2 [Citrus sinensis]
Length = 578
Score = 45.1 bits (105), Expect(3) = 4e-07
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = +2
Query: 584 KANRYIHAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMISG 763
K R +H VL +GFL N+V+ ++++ Y++ + AR+LFD + + W M+SG
Sbjct: 175 KLTRQVHGQVLVTGFLS-NVVISSSIVDAYAKCGELSDARRLFDETEARDVLTWTTMVSG 233
Score = 32.3 bits (72), Expect(3) = 4e-07
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 20/128 (15%)
Frame = +3
Query: 150 IHKTKLPNHLITTPTISITTKRYLFAHYSSTSIL------LP----------CPESKQHL 281
I++ LPN+ + +S+ +K L SS +L LP C ESK
Sbjct: 10 INRKNLPNNCLIQSFLSLISKGQLSEAISSLDLLAQRGIRLPAETLAFILQQCAESKSLK 69
Query: 282 ANPDDYAHVNAL-KEPPSSQCSTR---GQIHCVDDSVDGLQPQMSVILFDEMLERDVGS* 449
+ H+ ++ P++ S C D VD + + LFD M ERDV S
Sbjct: 70 LGKRVHLHLKLTQRKTPTTFLSNHLISMYFKCGSD-VDARKHARN--LFDNMAERDVVSW 126
Query: 450 TSMIVGYA 473
+MI+GYA
Sbjct: 127 NTMIIGYA 134
Score = 23.1 bits (48), Expect(3) = 4e-07
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 535 SFSGNLASCSGLQALKQGQQIH 600
SF+G L C L+ LK +Q+H
Sbjct: 160 SFAGILTICVKLEELKLTRQVH 181
>ref|XP_002526753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223533942|gb|EEF35667.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 818
Score = 47.8 bits (112), Expect(3) = 5e-07
Identities = 24/57 (42%), Positives = 38/57 (66%)
Frame = +2
Query: 593 RYIHAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMISG 763
+ +H+HVL L +VLQN+++ MYS+ S+ AR++FDSM + I+WN M+ G
Sbjct: 697 KQVHSHVLRRE-LPFYVVLQNSMIDMYSKCGSLNYARRIFDSMPERTVISWNAMLVG 752
Score = 26.9 bits (58), Expect(3) = 5e-07
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 478 SLKLFRTTISTGTTIPSAHSFSGNLASCSGLQALKQGQQIHT 603
+L+LFR G + + +++ L S SGL AL G+Q+H+
Sbjct: 661 ALELFRRLEREGLS-SNCVTYASVLTSLSGLAALDHGKQVHS 701
Score = 25.4 bits (54), Expect(3) = 5e-07
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 408 ILFDEMLERDVGS*TSMIVGYAGL 479
++F+ + ERDV S T++I GYA L
Sbjct: 632 MVFESLPERDVVSCTAIISGYAQL 655
>dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 45.4 bits (106), Expect(2) = 6e-07
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +2
Query: 599 IHAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMISG 763
IHA+ + +G L D +V+ + L+ MY++ SI CA K F M T+ + W MISG
Sbjct: 413 IHANTIKTGCLSD-VVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISG 466
Score = 35.4 bits (80), Expect(2) = 6e-07
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +1
Query: 478 SLKLFRTTISTGTTIPSAHSFSGNLASCSGLQALKQGQQIH 600
+LKLFR + + P +FS L+ CS + AL+QG+QIH
Sbjct: 375 ALKLFRDLVRSELK-PDLFTFSSILSVCSAMMALEQGEQIH 414
>ref|XP_006285896.1| hypothetical protein CARUB_v10007408mg [Capsella rubella]
gi|482554601|gb|EOA18794.1| hypothetical protein
CARUB_v10007408mg [Capsella rubella]
Length = 770
Score = 49.3 bits (116), Expect(2) = 6e-07
Identities = 25/61 (40%), Positives = 34/61 (55%)
Frame = +2
Query: 593 RYIHAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMISGVKV 772
R H HV+ SG++ D+ V + L MY + I AR FD++T K + WNEMI G
Sbjct: 540 RQFHGHVVKSGYVSDSFV-EAALTDMYCKCGEIDSARLFFDTVTRKNTVIWNEMIHGYAH 598
Query: 773 N 775
N
Sbjct: 599 N 599
Score = 31.6 bits (70), Expect(2) = 6e-07
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 478 SLKLFRTTISTGTTIPSAHSFSGNLASCSGLQALKQGQQIH 600
+L LF+ TG P+ S++ L SCS L +L G+Q H
Sbjct: 503 ALMLFKRMQQTGVLFPNETSYAIVLGSCSRLCSLVNGRQFH 543
>dbj|BAK07038.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 594
Score = 45.4 bits (106), Expect(2) = 6e-07
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +2
Query: 599 IHAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMISG 763
IHA+ + +G L D +V+ + L+ MY++ SI CA K F M T+ + W MISG
Sbjct: 231 IHANTIKTGCLSD-VVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISG 284
Score = 35.4 bits (80), Expect(2) = 6e-07
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +1
Query: 478 SLKLFRTTISTGTTIPSAHSFSGNLASCSGLQALKQGQQIH 600
+LKLFR + + P +FS L+ CS + AL+QG+QIH
Sbjct: 193 ALKLFRDLVRSELK-PDLFTFSSILSVCSAMMALEQGEQIH 232
>ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 53.5 bits (127), Expect(2) = 6e-07
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +2
Query: 599 IHAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMISG 763
+H+HVL GF G +L +Q +L+ Y + + IG ARK+F+ M + +AW MISG
Sbjct: 114 VHSHVLKDGF-GSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISG 167
Score = 27.3 bits (59), Expect(2) = 6e-07
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 487 LFRTTISTGTTIPSAHSFSGNLASCSGLQALKQGQQIHT 603
LF+ TG +P++ + + L +C+ + A +G Q+H+
Sbjct: 78 LFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHS 116
>ref|XP_004167548.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 376
Score = 53.5 bits (127), Expect(2) = 6e-07
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +2
Query: 599 IHAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMISG 763
+H+HVL GF G +L +Q +L+ Y + + IG ARK+F+ M + +AW MISG
Sbjct: 114 VHSHVLKDGF-GSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISG 167
Score = 27.3 bits (59), Expect(2) = 6e-07
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 487 LFRTTISTGTTIPSAHSFSGNLASCSGLQALKQGQQIHT 603
LF+ TG +P++ + + L +C+ + A +G Q+H+
Sbjct: 78 LFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHS 116
>ref|XP_006347148.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Solanum tuberosum]
Length = 1057
Score = 42.0 bits (97), Expect(3) = 7e-07
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +2
Query: 593 RYIHAHVLTSGFLGDNLVLQNNLLYMYSRSQSIGCARKLFDSMTTKGNIAWNEMISG 763
R IHA + SG+ D+ L N L+++Y+R I A FD + TK I+WN ++SG
Sbjct: 604 RQIHAQSVMSGYSLDHS-LGNALIFLYARCGKIQDAYAAFDKIDTKDIISWNGLVSG 659
Score = 33.1 bits (74), Expect(3) = 7e-07
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 478 SLKLFRTTISTGTTIPSAHSFSGNLASCSGLQALKQGQQIH 600
+LKLFR G + F+ +++C+G+QAL QG+QIH
Sbjct: 568 ALKLFRKMQDHGIRSDNI-GFASAISACAGIQALYQGRQIH 607
Score = 24.6 bits (52), Expect(3) = 7e-07
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 411 LFDEMLERDVGS*TSMIVGYAGLTQAVQNHDF 506
+F + E DV S TSMI GYA HDF
Sbjct: 540 IFWRLNEEDVVSWTSMIAGYA-------QHDF 564