BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00024452
         (789 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274321.2| PREDICTED: pentatricopeptide repeat-containi...    68   3e-09
ref|XP_006348701.1| PREDICTED: pentatricopeptide repeat-containi...    67   7e-09
ref|XP_007045890.1| Tetratricopeptide repeat-like superfamily pr...    67   7e-09
ref|XP_007045889.1| Tetratricopeptide repeat (TPR)-like superfam...    67   7e-09
ref|XP_004239056.1| PREDICTED: pentatricopeptide repeat-containi...    65   3e-08
gb|EXB44833.1| hypothetical protein L484_026413 [Morus notabilis]      64   5e-08
ref|XP_006415925.1| hypothetical protein EUTSA_v10007071mg [Eutr...    64   5e-08
ref|XP_002512090.1| pentatricopeptide repeat-containing protein,...    64   8e-08
ref|XP_002893403.1| pentatricopeptide repeat-containing protein ...    63   1e-07
gb|EYU28858.1| hypothetical protein MIMGU_mgv1a020475mg [Mimulus...    60   9e-07
gb|EPS71121.1| hypothetical protein M569_03636 [Genlisea aurea]        60   1e-06
ref|XP_006303169.1| hypothetical protein CARUB_v10008572mg [Caps...    60   1e-06
ref|XP_006484190.1| PREDICTED: pentatricopeptide repeat-containi...    58   4e-06
ref|NP_564247.1| pentatricopeptide repeat-containing protein [Ar...    58   4e-06
gb|AAM61409.1| unknown [Arabidopsis thaliana]                          58   4e-06
ref|XP_002315005.2| pentatricopeptide repeat-containing family p...    57   1e-05

>ref|XP_002274321.2| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like [Vitis vinifera]
           gi|297738080|emb|CBI27281.3| unnamed protein product
           [Vitis vinifera]
          Length = 616

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -3

Query: 787 REFDYESDDHVEDLAKKFKIRMGTENRRLMLFNLEYSTEY 668
           RE DYES+D VE LA+KFKIRMGTENRR MLFNL Y+TEY
Sbjct: 576 REMDYESNDQVESLARKFKIRMGTENRRDMLFNLAYNTEY 615


>ref|XP_006348701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like [Solanum tuberosum]
          Length = 617

 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 31/40 (77%), Positives = 33/40 (82%)
 Frame = -3

Query: 787 REFDYESDDHVEDLAKKFKIRMGTENRRLMLFNLEYSTEY 668
           RE DYESDD VE+L KKF IRMGTENRR MLFNL Y+ EY
Sbjct: 576 REMDYESDDRVEELTKKFNIRMGTENRRNMLFNLRYNMEY 615


>ref|XP_007045890.1| Tetratricopeptide repeat-like superfamily protein isoform 2
           [Theobroma cacao] gi|508709825|gb|EOY01722.1|
           Tetratricopeptide repeat-like superfamily protein
           isoform 2 [Theobroma cacao]
          Length = 444

 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = -3

Query: 787 REFDYESDDHVEDLAKKFKIRMGTENRRLMLFNLEYSTEY 668
           RE DYESDD VE LAKKF I+MG+ENRR MLFNL+Y TEY
Sbjct: 401 REMDYESDDRVESLAKKFNIQMGSENRRGMLFNLDYGTEY 440


>ref|XP_007045889.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|508709824|gb|EOY01721.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 616

 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = -3

Query: 787 REFDYESDDHVEDLAKKFKIRMGTENRRLMLFNLEYSTEY 668
           RE DYESDD VE LAKKF I+MG+ENRR MLFNL+Y TEY
Sbjct: 573 REMDYESDDRVESLAKKFNIQMGSENRRGMLFNLDYGTEY 612


>ref|XP_004239056.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like [Solanum lycopersicum]
          Length = 617

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 30/40 (75%), Positives = 32/40 (80%)
 Frame = -3

Query: 787 REFDYESDDHVEDLAKKFKIRMGTENRRLMLFNLEYSTEY 668
           RE DYESDD VE+L KKF IRMG ENRR MLFNL Y+ EY
Sbjct: 576 REMDYESDDRVEELTKKFNIRMGAENRRNMLFNLRYNMEY 615


>gb|EXB44833.1| hypothetical protein L484_026413 [Morus notabilis]
          Length = 665

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 30/40 (75%), Positives = 33/40 (82%)
 Frame = -3

Query: 787 REFDYESDDHVEDLAKKFKIRMGTENRRLMLFNLEYSTEY 668
           RE DYES+D V+  A K+KIRMGTENRR MLFNL YSTEY
Sbjct: 624 REMDYESNDRVQSFAVKYKIRMGTENRRDMLFNLRYSTEY 663


>ref|XP_006415925.1| hypothetical protein EUTSA_v10007071mg [Eutrema salsugineum]
           gi|557093696|gb|ESQ34278.1| hypothetical protein
           EUTSA_v10007071mg [Eutrema salsugineum]
          Length = 625

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 29/37 (78%), Positives = 34/37 (91%)
 Frame = -3

Query: 787 REFDYESDDHVEDLAKKFKIRMGTENRRLMLFNLEYS 677
           RE DYE++DHVE LAKKF+IRMG+ENRR MLFNL+YS
Sbjct: 585 REIDYENNDHVESLAKKFEIRMGSENRRNMLFNLDYS 621


>ref|XP_002512090.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549270|gb|EEF50759.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score = 63.5 bits (153), Expect = 8e-08
 Identities = 30/40 (75%), Positives = 33/40 (82%)
 Frame = -3

Query: 787 REFDYESDDHVEDLAKKFKIRMGTENRRLMLFNLEYSTEY 668
           RE DY+SDD V  +AK  KIRMGTENRR MLFNLEYST+Y
Sbjct: 578 REMDYDSDDRVGSVAKNCKIRMGTENRRDMLFNLEYSTDY 617


>ref|XP_002893403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339245|gb|EFH69662.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 630

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = -3

Query: 787 REFDYESDDHVEDLAKKFKIRMGTENRRLMLFNLEYS 677
           RE DYE+DD VE LAKKF+IRMGTENRR MLFN++YS
Sbjct: 587 REMDYENDDQVEALAKKFQIRMGTENRRNMLFNIDYS 623


>gb|EYU28858.1| hypothetical protein MIMGU_mgv1a020475mg [Mimulus guttatus]
          Length = 606

 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = -3

Query: 787 REFDYESDDHVEDLAKKFKIRMGTENRRLMLFNLEYSTEY 668
           RE DYESD+ VE LA++FKIRMGTE RR +LFNL Y T+Y
Sbjct: 566 REMDYESDEKVESLARQFKIRMGTEVRRDLLFNLHYITDY 605


>gb|EPS71121.1| hypothetical protein M569_03636 [Genlisea aurea]
          Length = 618

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = -3

Query: 787 REFDYESDDHVEDLAKKFKIRMGTENRRLMLFNLEYSTEY 668
           RE DYESDD V+  AKKF IR+G+E RR  LFNL+YSTEY
Sbjct: 578 REMDYESDDKVDWFAKKFNIRLGSETRRDALFNLQYSTEY 617


>ref|XP_006303169.1| hypothetical protein CARUB_v10008572mg [Capsella rubella]
           gi|482571880|gb|EOA36067.1| hypothetical protein
           CARUB_v10008572mg [Capsella rubella]
          Length = 630

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -3

Query: 787 REFDYESDDHVEDLAKKFKIRMGTENRRLMLFNLEYS 677
           RE D E+DD VE LAKKF+IRMGTENRR MLFN++YS
Sbjct: 587 REMDNENDDQVEALAKKFQIRMGTENRRNMLFNIDYS 623


>ref|XP_006484190.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 613

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 28/40 (70%), Positives = 31/40 (77%)
 Frame = -3

Query: 787 REFDYESDDHVEDLAKKFKIRMGTENRRLMLFNLEYSTEY 668
           RE D ES+D VE LAKKF IRM TENR+ +LFNLEYS  Y
Sbjct: 573 REMDEESNDRVEALAKKFDIRMNTENRKNILFNLEYSASY 612


>ref|NP_564247.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75173405|sp|Q9FZD1.1|PPR58_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g26460, mitochondrial; Flags: Precursor
           gi|9797754|gb|AAF98572.1|AC013427_15 Contains similarity
           to a hypothetical protein F21B7.16 gi|7485908 from
           Arabidopsis thaliana BAC F21B7 gb|AC002560 and contains
           multiple PPR PF|01535 repeats and a domain of unknown
           function PF|00668. ESTs gb|T45755, gb|AI993167,
           gb|AV554476, gb|T46823, gb|T41981, gb|AV546597,
           gb|AI099868 come from this gene [Arabidopsis thaliana]
           gi|19698979|gb|AAL91225.1| unknown protein [Arabidopsis
           thaliana] gi|22136300|gb|AAM91228.1| unknown protein
           [Arabidopsis thaliana] gi|332192573|gb|AEE30694.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 27/37 (72%), Positives = 32/37 (86%)
 Frame = -3

Query: 787 REFDYESDDHVEDLAKKFKIRMGTENRRLMLFNLEYS 677
           RE D E+DD VE LAKKF+IRMG+ENRR MLFN++YS
Sbjct: 587 REMDDENDDQVEALAKKFQIRMGSENRRNMLFNIDYS 623


>gb|AAM61409.1| unknown [Arabidopsis thaliana]
          Length = 630

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 27/37 (72%), Positives = 32/37 (86%)
 Frame = -3

Query: 787 REFDYESDDHVEDLAKKFKIRMGTENRRLMLFNLEYS 677
           RE D E+DD VE LAKKF+IRMG+ENRR MLFN++YS
Sbjct: 587 REMDDENDDQVEALAKKFQIRMGSENRRNMLFNIDYS 623


>ref|XP_002315005.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550329962|gb|EEF01176.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 623

 Score = 56.6 bits (135), Expect = 1e-05
 Identities = 25/40 (62%), Positives = 33/40 (82%)
 Frame = -3

Query: 787 REFDYESDDHVEDLAKKFKIRMGTENRRLMLFNLEYSTEY 668
           RE +YESDD VE  A+KF  R+G++NRR +LFNLEYST++
Sbjct: 583 REMEYESDDRVEFWARKFDYRLGSQNRRDLLFNLEYSTDF 622