BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00024421
         (1250 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ40865.1| bHLH transcriptional factor [Coptis japonica]         291   5e-76
dbj|BAJ41095.1| transcriptional factor CjbHLH1 [Coptis japonica ...   153   2e-34

>dbj|BAJ40865.1| bHLH transcriptional factor [Coptis japonica]
          Length = 228

 Score =  291 bits (744), Expect = 5e-76
 Identities = 160/235 (68%), Positives = 180/235 (76%)
 Frame = -3

Query: 1122 WDTVCSDSHSGGPVPAFTGVDARERHKLAERERRKSMRELFLSLHELLPHANTVRKEQSA 943
            W+TV S+  S G       +DARERHKLAERERRKSMRELFLSLH LLPH NTVRKEQS+
Sbjct: 9    WETVSSEGKSSG-----APIDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKEQSS 63

Query: 942  ILDEIIKYIPLAAARHSSLQTRRDXXXXXXXXXXXXXXXXHGKASPAVHVVXXXXXXXXX 763
            ILDEIIKYIPLA+AR  SLQ R++                   ASP++ V          
Sbjct: 64   ILDEIIKYIPLASARLKSLQNRKESTPLSTRPKL---------ASPSIQV-SDRKSSGSS 113

Query: 762  XXSDCNIRVAPEQSSSVSIRVRGDRVNVSLTDTKGTAQSLLLSAVLDELEAHQLELVRST 583
              +DC+IRVAPE S+SV+IRVRGDRVNVSLTDTKGTAQ+LLLSA+ DEL+AH LELVRST
Sbjct: 114  NSTDCDIRVAPEPSASVAIRVRGDRVNVSLTDTKGTAQTLLLSAIFDELDAHNLELVRST 173

Query: 582  HCRDGSKVLHHSESKICDGLDRSPALLKSRLQELACRLHKLRKSSTLKRSFDQLD 418
            HCRDGSKVLHHSESKI DGL+RSP LLK+RLQELA RLHKLRKSS+ KR+FDQLD
Sbjct: 174  HCRDGSKVLHHSESKISDGLERSPGLLKTRLQELAGRLHKLRKSSSHKRTFDQLD 228


>dbj|BAJ41095.1| transcriptional factor CjbHLH1 [Coptis japonica var. dissecta]
          Length = 206

 Score =  153 bits (386), Expect = 2e-34
 Identities = 92/166 (55%), Positives = 110/166 (66%)
 Frame = -3

Query: 1122 WDTVCSDSHSGGPVPAFTGVDARERHKLAERERRKSMRELFLSLHELLPHANTVRKEQSA 943
            W+TV S+  S G       +DARERHKLAERERRKSMRELFLSLH LLPH NTVRKEQS+
Sbjct: 34   WETVSSEGKSSG-----APIDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKEQSS 88

Query: 942  ILDEIIKYIPLAAARHSSLQTRRDXXXXXXXXXXXXXXXXHGKASPAVHVVXXXXXXXXX 763
            ILDEIIKYIPLA+AR  SLQ R++                   ASP++  V         
Sbjct: 89   ILDEIIKYIPLASARLKSLQNRKESTPLSTRPKL---------ASPSIQ-VSDRKSSGSS 138

Query: 762  XXSDCNIRVAPEQSSSVSIRVRGDRVNVSLTDTKGTAQSLLLSAVL 625
              + C+IRVAPE S+SV+IRVRGDRV VSLTDT+    + ++SA+L
Sbjct: 139  NSTXCDIRVAPEPSASVAIRVRGDRVXVSLTDTR-VQLNFVVSAIL 183