BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00024117
         (279 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB53393.1| RNA polymerase II largest subunit [Gunnera chilen...   178   6e-43
gb|ABB53390.1| RNA polymerase II largest subunit [Cissus tuberosa]    177   1e-42
gb|ABB53391.1| RNA polymerase II largest subunit [Dillenia suffr...   177   1e-42
gb|ABB53395.1| RNA polymerase II largest subunit [Hibbertia aspera]   177   1e-42
gb|ABB53402.1| RNA polymerase II largest subunit [Platanus orien...   176   2e-42
gb|ABB53385.1| RNA polymerase II largest subunit [Aextoxicon pun...   176   3e-42
gb|ABB53404.1| RNA polymerase II largest subunit [Nelumbo nucifera]   176   3e-42
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...   176   4e-42
gb|ABB53386.1| RNA polymerase II largest subunit [Berberidopsis ...   176   4e-42
gb|ABB53413.1| RNA polymerase II largest subunit [Vitis piasezkii]    176   4e-42
gb|ACD63091.1| RNA polymerase II largest subunit [Saruma henryi]      174   9e-42
gb|ABB53401.1| RNA polymerase II largest subunit [Macadamia inte...   174   1e-41
gb|ABB53396.1| RNA polymerase II largest subunit [Hibbertia scan...   174   1e-41
gb|ABB53394.1| RNA polymerase II largest subunit [Hibbertia cune...   173   3e-41
gb|ABB53412.1| RNA polymerase II largest subunit [Tetracentron s...   173   3e-41
gb|ABB53389.1| RNA polymerase II largest subunit [Buxus sempervi...   171   7e-41
gb|ABB53403.1| RNA polymerase II largest subunit [Platanus orien...   171   7e-41
gb|ACD63081.1| RNA polymerase II largest subunit [Asparagus offi...   171   1e-40
gb|ABB53409.1| RNA polymerase II largest subunit [Sedum burrito]      170   2e-40
ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II su...   170   2e-40

>gb|ABB53393.1| RNA polymerase II largest subunit [Gunnera chilensis]
          Length = 240

 Score =  178 bits (452), Expect = 6e-43
 Identities = 86/92 (93%), Positives = 89/92 (96%)
 Frame = -3

Query: 277 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
           DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK+EFDKVFKYEI DE+W
Sbjct: 17  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKAEFDKVFKYEIDDENW 76

Query: 97  NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
           NP YMLPEHVEDLKTI EFR+VFDAEVQKLEA
Sbjct: 77  NPSYMLPEHVEDLKTIREFRNVFDAEVQKLEA 108


>gb|ABB53390.1| RNA polymerase II largest subunit [Cissus tuberosa]
          Length = 240

 Score =  177 bits (449), Expect = 1e-42
 Identities = 85/92 (92%), Positives = 89/92 (96%)
 Frame = -3

Query: 277 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
           DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK+EFD+VFKYEI DE+W
Sbjct: 17  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKAEFDRVFKYEIDDENW 76

Query: 97  NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
           NP YMLPEHVEDLKTI EFR+VFDAEVQKLEA
Sbjct: 77  NPSYMLPEHVEDLKTIREFRNVFDAEVQKLEA 108


>gb|ABB53391.1| RNA polymerase II largest subunit [Dillenia suffruticosa]
          Length = 240

 Score =  177 bits (449), Expect = 1e-42
 Identities = 85/92 (92%), Positives = 89/92 (96%)
 Frame = -3

Query: 277 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
           DIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQKLDSLKMKKSEFD+VFKYEI DE+W
Sbjct: 17  DIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQKLDSLKMKKSEFDRVFKYEIDDENW 76

Query: 97  NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
           NP YMLPEHVEDLKTI EFR+VFDAEVQKLEA
Sbjct: 77  NPSYMLPEHVEDLKTIREFRNVFDAEVQKLEA 108


>gb|ABB53395.1| RNA polymerase II largest subunit [Hibbertia aspera]
          Length = 240

 Score =  177 bits (449), Expect = 1e-42
 Identities = 85/92 (92%), Positives = 89/92 (96%)
 Frame = -3

Query: 277 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
           DIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQKLDSLKMKKSEFD+VFKYEI DE+W
Sbjct: 17  DIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQKLDSLKMKKSEFDRVFKYEIDDENW 76

Query: 97  NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
           NP YMLPEHVEDLKTI EFR+VFDAEVQKLEA
Sbjct: 77  NPSYMLPEHVEDLKTIREFRNVFDAEVQKLEA 108


>gb|ABB53402.1| RNA polymerase II largest subunit [Platanus orientalis]
          Length = 240

 Score =  176 bits (447), Expect = 2e-42
 Identities = 85/92 (92%), Positives = 89/92 (96%)
 Frame = -3

Query: 277 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
           DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVF+YEI +E+W
Sbjct: 17  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFRYEIDNENW 76

Query: 97  NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
           NP YMLPEHVEDLKTI EFR+VFDAEVQKLEA
Sbjct: 77  NPSYMLPEHVEDLKTIREFRNVFDAEVQKLEA 108


>gb|ABB53385.1| RNA polymerase II largest subunit [Aextoxicon punctatum]
          Length = 240

 Score =  176 bits (446), Expect = 3e-42
 Identities = 84/92 (91%), Positives = 89/92 (96%)
 Frame = -3

Query: 277 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
           DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKS+FD+VF+YEI DE+W
Sbjct: 17  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSDFDRVFRYEIDDENW 76

Query: 97  NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
           NP YMLPEHVEDLKTI EFR+VFDAEVQKLEA
Sbjct: 77  NPSYMLPEHVEDLKTIREFRNVFDAEVQKLEA 108


>gb|ABB53404.1| RNA polymerase II largest subunit [Nelumbo nucifera]
          Length = 240

 Score =  176 bits (446), Expect = 3e-42
 Identities = 84/92 (91%), Positives = 89/92 (96%)
 Frame = -3

Query: 277 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
           DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QKLDSLKM+KSEFDKVF+YEI DE+W
Sbjct: 17  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMRKSEFDKVFRYEIDDENW 76

Query: 97  NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
           NP YMLPEHVEDLKTI EFR+VFDAEVQKLEA
Sbjct: 77  NPSYMLPEHVEDLKTIREFRNVFDAEVQKLEA 108


>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
            vinifera]
          Length = 1848

 Score =  176 bits (445), Expect = 4e-42
 Identities = 84/92 (91%), Positives = 88/92 (95%)
 Frame = -3

Query: 277  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
            DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QKLDSLKMKK EFD+VFKYEI DE+W
Sbjct: 865  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKGEFDRVFKYEIDDENW 924

Query: 97   NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
            NP YMLPEHVEDLKTI EFR+VFDAEVQKLEA
Sbjct: 925  NPSYMLPEHVEDLKTIREFRNVFDAEVQKLEA 956


>gb|ABB53386.1| RNA polymerase II largest subunit [Berberidopsis beckleri]
          Length = 240

 Score =  176 bits (445), Expect = 4e-42
 Identities = 84/92 (91%), Positives = 88/92 (95%)
 Frame = -3

Query: 277 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
           DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKS+FD+ F+YEI DE W
Sbjct: 17  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSDFDRYFRYEIDDESW 76

Query: 97  NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
           NPGYMLPEHVEDLKTI EFR+VFDAEVQKLEA
Sbjct: 77  NPGYMLPEHVEDLKTIREFRNVFDAEVQKLEA 108


>gb|ABB53413.1| RNA polymerase II largest subunit [Vitis piasezkii]
          Length = 240

 Score =  176 bits (445), Expect = 4e-42
 Identities = 84/92 (91%), Positives = 88/92 (95%)
 Frame = -3

Query: 277 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
           DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QKLDSLKMKK EFD+VFKYEI DE+W
Sbjct: 17  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKGEFDRVFKYEIDDENW 76

Query: 97  NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
           NP YMLPEHVEDLKTI EFR+VFDAEVQKLEA
Sbjct: 77  NPSYMLPEHVEDLKTIREFRNVFDAEVQKLEA 108


>gb|ACD63091.1| RNA polymerase II largest subunit [Saruma henryi]
          Length = 1009

 Score =  174 bits (442), Expect = 9e-42
 Identities = 84/92 (91%), Positives = 87/92 (94%)
 Frame = -3

Query: 277  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
            DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK+EFDKVF+YE  D +W
Sbjct: 783  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKAEFDKVFRYEFDDANW 842

Query: 97   NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
            NP YMLPEHVEDLKTI EFRSVFDAEVQKLEA
Sbjct: 843  NPSYMLPEHVEDLKTIREFRSVFDAEVQKLEA 874


>gb|ABB53401.1| RNA polymerase II largest subunit [Macadamia integrifolia]
          Length = 240

 Score =  174 bits (441), Expect = 1e-41
 Identities = 84/92 (91%), Positives = 88/92 (95%)
 Frame = -3

Query: 277 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
           DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEF+ VF+YEI DE+W
Sbjct: 17  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFNTVFRYEIDDENW 76

Query: 97  NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
           NP YMLPEHVEDLKTI EFR+VFDAEVQKLEA
Sbjct: 77  NPNYMLPEHVEDLKTIREFRNVFDAEVQKLEA 108


>gb|ABB53396.1| RNA polymerase II largest subunit [Hibbertia scandens]
          Length = 240

 Score =  174 bits (441), Expect = 1e-41
 Identities = 84/92 (91%), Positives = 88/92 (95%)
 Frame = -3

Query: 277 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
           DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFD+VFKYEI DE+W
Sbjct: 17  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDRVFKYEIDDENW 76

Query: 97  NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
           NP YML EHV+DLKTI EFR+VFDAEVQKLEA
Sbjct: 77  NPSYMLSEHVDDLKTIREFRNVFDAEVQKLEA 108


>gb|ABB53394.1| RNA polymerase II largest subunit [Hibbertia cuneiformis]
          Length = 240

 Score =  173 bits (438), Expect = 3e-41
 Identities = 83/92 (90%), Positives = 88/92 (95%)
 Frame = -3

Query: 277 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
           DIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQKLDSLKMKKSEFD+VFKYEI DE+W
Sbjct: 17  DIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQKLDSLKMKKSEFDRVFKYEIDDENW 76

Query: 97  NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
           NP YML EHV+DLKTI EFR+VFDAEVQKLEA
Sbjct: 77  NPSYMLSEHVDDLKTIREFRNVFDAEVQKLEA 108


>gb|ABB53412.1| RNA polymerase II largest subunit [Tetracentron sinense]
          Length = 240

 Score =  173 bits (438), Expect = 3e-41
 Identities = 83/92 (90%), Positives = 88/92 (95%)
 Frame = -3

Query: 277 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
           DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QKLDSLKMKKSEFDKVF+YEI +E+W
Sbjct: 17  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKSEFDKVFRYEIDNENW 76

Query: 97  NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
           NP YMLPEHVEDLKTI EFR+VFDAEVQKL A
Sbjct: 77  NPSYMLPEHVEDLKTIREFRNVFDAEVQKLAA 108


>gb|ABB53389.1| RNA polymerase II largest subunit [Buxus sempervirens]
          Length = 240

 Score =  171 bits (434), Expect = 7e-41
 Identities = 81/92 (88%), Positives = 88/92 (95%)
 Frame = -3

Query: 277 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
           DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE QKLDSLKMKK++FDKVF+YEI DE+W
Sbjct: 17  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIEDQKLDSLKMKKADFDKVFRYEIDDENW 76

Query: 97  NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
           +P YMLPEHVEDLKTI EFR+VFDAEVQKL+A
Sbjct: 77  SPSYMLPEHVEDLKTIREFRNVFDAEVQKLQA 108


>gb|ABB53403.1| RNA polymerase II largest subunit [Platanus orientalis]
          Length = 240

 Score =  171 bits (434), Expect = 7e-41
 Identities = 82/92 (89%), Positives = 88/92 (95%)
 Frame = -3

Query: 277 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
           DIMVKYDGT RNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVF+YEI +E+W
Sbjct: 17  DIMVKYDGTFRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFRYEIDNENW 76

Query: 97  NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
           NP YMLPEHVEDLKTI EF++VFDAEV+KLEA
Sbjct: 77  NPSYMLPEHVEDLKTIREFQNVFDAEVRKLEA 108


>gb|ACD63081.1| RNA polymerase II largest subunit [Asparagus officinalis]
          Length = 1009

 Score =  171 bits (433), Expect = 1e-40
 Identities = 81/92 (88%), Positives = 86/92 (93%)
 Frame = -3

Query: 277  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
            DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF+ V++YEI D  W
Sbjct: 783  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFNNVYRYEIDDNQW 842

Query: 97   NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
            +P YMLPEHVEDLKTIPEFR+VFDAEVQKLEA
Sbjct: 843  DPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEA 874


>gb|ABB53409.1| RNA polymerase II largest subunit [Sedum burrito]
          Length = 240

 Score =  170 bits (431), Expect = 2e-40
 Identities = 82/92 (89%), Positives = 86/92 (93%)
 Frame = -3

Query: 277 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
           DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QKL+SLKMKK EF KVFKYEI D +W
Sbjct: 17  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLESLKMKKKEFKKVFKYEIDDPNW 76

Query: 97  NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
           NP YMLPEHVEDLKTI EFR+VFDAEVQKLEA
Sbjct: 77  NPSYMLPEHVEDLKTIREFRNVFDAEVQKLEA 108


>ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Oryza
            brachyantha]
          Length = 1855

 Score =  170 bits (430), Expect = 2e-40
 Identities = 81/92 (88%), Positives = 86/92 (93%)
 Frame = -3

Query: 277  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKYEIGDEHW 98
            DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EFD VF+YE+ DE+W
Sbjct: 865  DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKGEFDTVFRYELDDENW 924

Query: 97   NPGYMLPEHVEDLKTIPEFRSVFDAEVQKLEA 2
             P YMLPEHVEDLKTI EFR+VF+AEVQKLEA
Sbjct: 925  RPNYMLPEHVEDLKTIREFRNVFEAEVQKLEA 956