BLASTX nr result
ID: Sinomenium21_contig00023449
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00023449
(352 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002322376.2| hypothetical protein POPTR_0015s15360g [Popu... 65 1e-08
ref|XP_006362578.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
ref|XP_004293756.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
ref|XP_002528370.1| pentatricopeptide repeat-containing protein,... 59 7e-07
ref|XP_007024941.1| Pentatricopeptide repeat superfamily protein... 58 2e-06
ref|XP_007024939.1| Pentatricopeptide repeat (PPR-like) superfam... 58 2e-06
ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223... 58 2e-06
ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
ref|XP_004233900.1| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06
ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06
emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera] 57 2e-06
ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containi... 57 4e-06
>ref|XP_002322376.2| hypothetical protein POPTR_0015s15360g [Populus trichocarpa]
gi|550322786|gb|EEF06503.2| hypothetical protein
POPTR_0015s15360g [Populus trichocarpa]
Length = 594
Score = 64.7 bits (156), Expect = 1e-08
Identities = 27/42 (64%), Positives = 36/42 (85%)
Frame = +1
Query: 1 FFHKFLDEEQNVDQITLTGFMTACYDRNNYSVASELSKRISK 126
FFHK LD++QNVD++TLT F TACY+ N Y++ S+LS+RISK
Sbjct: 550 FFHKLLDKDQNVDRVTLTAFTTACYESNKYALVSDLSERISK 591
>ref|XP_006362578.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like isoform X1 [Solanum tuberosum]
gi|565393841|ref|XP_006362579.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X2 [Solanum tuberosum]
gi|565393843|ref|XP_006362580.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X3 [Solanum tuberosum]
Length = 716
Score = 59.7 bits (143), Expect = 4e-07
Identities = 23/42 (54%), Positives = 35/42 (83%)
Frame = +1
Query: 1 FFHKFLDEEQNVDQITLTGFMTACYDRNNYSVASELSKRISK 126
FFHK LD++Q+VD++TL FM+ACY+ NNY + S +++RI+K
Sbjct: 667 FFHKLLDKQQSVDRVTLAAFMSACYESNNYDLVSSMNERITK 708
>ref|XP_004293756.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Fragaria vesca subsp. vesca]
Length = 705
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/42 (57%), Positives = 35/42 (83%)
Frame = +1
Query: 1 FFHKFLDEEQNVDQITLTGFMTACYDRNNYSVASELSKRISK 126
FFHK +D++QNVD++TL F TACY+ N Y++ S+L++RISK
Sbjct: 661 FFHKLVDKDQNVDRVTLQAFTTACYESNKYALLSDLTERISK 702
>ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532238|gb|EEF34042.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 712
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/42 (59%), Positives = 34/42 (80%)
Frame = +1
Query: 1 FFHKFLDEEQNVDQITLTGFMTACYDRNNYSVASELSKRISK 126
FFHK LD++ NVD+ITL F TACY+ N +++ S+LS+RISK
Sbjct: 668 FFHKLLDKDLNVDRITLAAFTTACYESNKFALVSDLSERISK 709
>ref|XP_007024941.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508780307|gb|EOY27563.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 738
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/42 (52%), Positives = 36/42 (85%)
Frame = +1
Query: 1 FFHKFLDEEQNVDQITLTGFMTACYDRNNYSVASELSKRISK 126
FFH+ LD+++NVD++TL FMTACY+ + +++ S+L++RISK
Sbjct: 694 FFHRLLDKDRNVDRVTLAAFMTACYETDKFALVSDLNERISK 735
>ref|XP_007024939.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao] gi|508780305|gb|EOY27561.1| Pentatricopeptide
repeat (PPR-like) superfamily protein [Theobroma cacao]
Length = 692
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/42 (52%), Positives = 36/42 (85%)
Frame = +1
Query: 1 FFHKFLDEEQNVDQITLTGFMTACYDRNNYSVASELSKRISK 126
FFH+ LD+++NVD++TL FMTACY+ + +++ S+L++RISK
Sbjct: 648 FFHRLLDKDRNVDRVTLAAFMTACYETDKFALVSDLNERISK 689
>ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +1
Query: 1 FFHKFLDEEQNVDQITLTGFMTACYDRNNYSVASELSKRISK 126
FFHK LD+E NVD++TL F TAC + N Y++ S+LS+RISK
Sbjct: 1271 FFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLSERISK 1312
>ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +1
Query: 1 FFHKFLDEEQNVDQITLTGFMTACYDRNNYSVASELSKRISK 126
FFHK LD+E NVD++TL F TAC + N Y++ S+LS+RISK
Sbjct: 684 FFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLSERISK 725
>ref|XP_004233900.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Solanum lycopersicum]
Length = 716
Score = 57.4 bits (137), Expect = 2e-06
Identities = 22/42 (52%), Positives = 34/42 (80%)
Frame = +1
Query: 1 FFHKFLDEEQNVDQITLTGFMTACYDRNNYSVASELSKRISK 126
FFHK LD++Q+VD++TL FM+ACY+ N Y + S +++RI+K
Sbjct: 667 FFHKLLDKQQSVDRVTLAAFMSACYESNKYDLVSSMNERITK 708
>ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +1
Query: 1 FFHKFLDEEQNVDQITLTGFMTACYDRNNYSVASELSKRI 120
FFHK LD+E NV+++TL GFM CY+ N Y + SELS+RI
Sbjct: 664 FFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSELSERI 703
>emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +1
Query: 1 FFHKFLDEEQNVDQITLTGFMTACYDRNNYSVASELSKRI 120
FFHK LD+E NV+++TL GFM CY+ N Y + SELS+RI
Sbjct: 664 FFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSELSERI 703
>ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like isoform X1 [Glycine max]
gi|571479155|ref|XP_006587776.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X2 [Glycine max]
gi|571479157|ref|XP_006587777.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X3 [Glycine max]
Length = 693
Score = 56.6 bits (135), Expect = 4e-06
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = +1
Query: 1 FFHKFLDEEQNVDQITLTGFMTACYDRNNYSVASELSKRISK 126
FFHK LD++ NV+++T+ FMTACY+ N Y + S+LS RI K
Sbjct: 642 FFHKLLDKDPNVNRVTIAAFMTACYESNKYDLVSDLSARIYK 683