BLASTX nr result

ID: Sinomenium21_contig00023328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00023328
         (406 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                60   3e-07
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ...    59   7e-07
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...    59   9e-07
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic...    56   5e-06
gb|EXB80302.1| hypothetical protein L484_025158 [Morus notabilis]      55   8e-06
gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis]      55   8e-06
gb|EMT16285.1| hypothetical protein F775_32201 [Aegilops tauschii]     55   8e-06
gb|EMS53744.1| F-box/LRR-repeat protein 4 [Triticum urartu]            55   8e-06

>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/43 (60%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
 Frame = +1

Query: 280 RINAKLEIWREALESKGFKISRTKTEYIKCNFR-GNSDTDEEI 405
           R+NA+LE+WR+ LESKGF++SRTKTEY+ C F  G  +TD E+
Sbjct: 450 RVNARLEVWRQTLESKGFRLSRTKTEYLGCKFSDGLDETDVEV 492


>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
           jockey-like [Brachypodium distachyon]
          Length = 307

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 24/40 (60%), Positives = 32/40 (80%)
 Frame = +1

Query: 283 INAKLEIWREALESKGFKISRTKTEYIKCNFRGNSDTDEE 402
           +N KLE+WR+ LESKGF++SRTKTEY+KC F   +  +EE
Sbjct: 65  VNRKLELWRQTLESKGFRLSRTKTEYMKCGFSTTTPEEEE 104


>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
           distachyon]
          Length = 567

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 24/40 (60%), Positives = 32/40 (80%)
 Frame = +1

Query: 283 INAKLEIWREALESKGFKISRTKTEYIKCNFRGNSDTDEE 402
           +N KLE+WR+ LESKGF++SRTKTEY+KC F   +  +EE
Sbjct: 325 VNRKLELWRQILESKGFRLSRTKTEYMKCGFSTTTPEEEE 364


>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
          Length = 882

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 23/41 (56%), Positives = 31/41 (75%)
 Frame = +1

Query: 283 INAKLEIWREALESKGFKISRTKTEYIKCNFRGNSDTDEEI 405
           +N KLE+WR+ LESKGF++SRTKTEY+ C F      +EE+
Sbjct: 275 VNRKLELWRQTLESKGFRLSRTKTEYMMCGFSTTRCEEEEV 315


>gb|EXB80302.1| hypothetical protein L484_025158 [Morus notabilis]
          Length = 583

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = +1

Query: 283 INAKLEIWREALESKGFKISRTKTEYIKCNFRGNSDTDEEI 405
           IN KLE+WR+ LE+KGFK+SRTKTEY+ C F    D  + I
Sbjct: 58  INRKLELWRQTLETKGFKLSRTKTEYMHCRFSNLRDQSDGI 98


>gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis]
          Length = 670

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 22/41 (53%), Positives = 32/41 (78%)
 Frame = +1

Query: 283 INAKLEIWREALESKGFKISRTKTEYIKCNFRGNSDTDEEI 405
           +N KLE+W++ LE+KGFK+SRTKTEY+ C F  +S+  + I
Sbjct: 420 VNRKLELWKQTLETKGFKLSRTKTEYMHCRFSNSSNQSDGI 460


>gb|EMT16285.1| hypothetical protein F775_32201 [Aegilops tauschii]
          Length = 618

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 22/41 (53%), Positives = 31/41 (75%)
 Frame = +1

Query: 283 INAKLEIWREALESKGFKISRTKTEYIKCNFRGNSDTDEEI 405
           +N KLE+WR+ LE KGF++SRTKTEY++C F      +EE+
Sbjct: 378 VNRKLELWRQTLELKGFRLSRTKTEYMRCGFSTTRREEEEV 418


>gb|EMS53744.1| F-box/LRR-repeat protein 4 [Triticum urartu]
          Length = 795

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 23/41 (56%), Positives = 31/41 (75%)
 Frame = +1

Query: 283 INAKLEIWREALESKGFKISRTKTEYIKCNFRGNSDTDEEI 405
           +N KLE+WR+ LESKGF++SRTKTEY+ C F      +EE+
Sbjct: 579 VNRKLELWRQTLESKGFRLSRTKTEYMMCAFSTTRCEEEEV 619


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