BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00023135
         (1303 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004243235.1| PREDICTED: ATP-dependent DNA helicase PIF1-l...   432   e-118
ref|XP_007216310.1| hypothetical protein PRUPE_ppa019701mg [Prun...   431   e-118
ref|XP_006586570.1| PREDICTED: ATP-dependent DNA helicase PIF1-l...   426   e-117
ref|XP_007048817.1| DNA repair and recombination protein pif1, p...   426   e-117
ref|XP_004306279.1| PREDICTED: DNA repair and recombination prot...   420   e-115
ref|XP_006380622.1| hypothetical protein POPTR_0007s09900g [Popu...   413   e-113
ref|XP_002520397.1| conserved hypothetical protein [Ricinus comm...   387   e-105
ref|XP_002975258.1| hypothetical protein SELMODRAFT_451567 [Sela...   341   5e-91
ref|XP_002987435.1| hypothetical protein SELMODRAFT_451566 [Sela...   341   5e-91
gb|EKC25648.1| ATP-dependent DNA helicase PIF1 [Crassostrea gigas]    291   4e-76
ref|XP_004359275.1| hypothetical protein DFA_01309 [Dictyosteliu...   290   7e-76
ref|XP_004343985.1| zinc knuckle domain containing protein [Acan...   285   2e-74
ref|XP_003755701.1| PREDICTED: ATP-dependent DNA helicase PIF1 [...   285   3e-74
ref|XP_003507209.1| PREDICTED: ATP-dependent DNA helicase PIF1, ...   283   9e-74
gb|EGW10989.1| ATP-dependent DNA helicase PIF1 [Cricetulus grise...   283   9e-74
ref|XP_785439.2| PREDICTED: ATP-dependent DNA helicase PIF1-like...   282   3e-73
ref|XP_004914012.1| PREDICTED: ATP-dependent DNA helicase PIF1-l...   281   3e-73
ref|XP_004914011.1| PREDICTED: ATP-dependent DNA helicase PIF1-l...   281   3e-73
ref|NP_001016603.1| PIF1 5'-to-3' DNA helicase [Xenopus (Siluran...   281   3e-73
gb|AAI70996.1| PIF1 5'-to-3' DNA helicase homolog [Xenopus (Silu...   281   3e-73

>ref|XP_004243235.1| PREDICTED: ATP-dependent DNA helicase PIF1-like [Solanum
            lycopersicum]
          Length = 498

 Score =  432 bits (1110), Expect = e-118
 Identities = 235/403 (58%), Positives = 287/403 (71%), Gaps = 14/403 (3%)
 Frame = +2

Query: 137  GRSVFITGSAGTGTSFLLQQAIKLLKQTHNPQEVFVTASTGVDACALNGRTLHSFAGGRL 316
            G SVFITGSAGTG ++LLQ  I  LK+ H    VFVTASTGV AC+LNG+TLHSFAG  +
Sbjct: 63   GNSVFITGSAGTGKTYLLQHIITKLKKIHGKSRVFVTASTGVAACSLNGQTLHSFAG--I 120

Query: 317  GLGDSDRELLLTDVSNNRQVRKRWRVAKALVIDEVSMISGEFFDKLEYIARKIRPQSR-- 490
            GLGD+    LL+ VS +++  +RW   +ALVIDE+SM+SGE FD LE+IAR IR +    
Sbjct: 121  GLGDASCVDLLSRVSLDKRAYRRWNKVRALVIDEISMVSGEVFDNLEFIARSIRSEELGC 180

Query: 491  IKAPWGGIQLIVSGDFFQLPPVIDLS-VKKEFAFEAECWNNSFDLQIELTRVFRQSDTQL 667
             +  WGGIQL+VSGDFFQLPPVI+    +KEFAFEA+CWN SFD QIEL  +FRQSD QL
Sbjct: 181  EEKIWGGIQLVVSGDFFQLPPVINKKGQQKEFAFEADCWNASFDEQIELKTIFRQSDAQL 240

Query: 668  IDLLQGIRRGCKDEKHLRILHQC--NAEPGDIMKDVPVEVPRLYPRNQDVKRVNEEKLKR 841
            I LLQGIR+G  D + L++L QC    EP            +LYPR +DV RVN E+L  
Sbjct: 241  IKLLQGIRKGKYDSEDLKLLDQCCSKVEPDS-------SAVQLYPRIEDVSRVNAERLDC 293

Query: 842  LGGDIVKYIAVDSGKEPWKRQLKQGIAPEELEICLGARVMLVKNKDLESGLVNGATGTVT 1021
            L   +  Y A+DSGK+PWK+QLK GIAPE L++C+G+RV+L KN D+  GLVNGATGT+ 
Sbjct: 294  LDEVLFNYQALDSGKDPWKKQLKNGIAPELLKLCVGSRVLLTKNIDVVGGLVNGATGTIL 353

Query: 1022 DFVK--------DGRVWGICERG-VLPKVKFDCGVEMVVEPERWDVMEGERVFATRKQVP 1174
            DF          D  +  IC  G +LP V+FD G E+++  ERW VMEG+   A RKQ+P
Sbjct: 354  DFAAVQDTHKLYDHEISDICGNGNLLPVVRFDSGQELMIGVERWYVMEGDEAVAMRKQIP 413

Query: 1175 LILSWALSIHKCQGMTLDILHTDLSRAFGCGMVYVALSRVRSL 1303
            LIL+WALSIHKCQGMTL+ LHTDL R FG GMVYVALSRV+SL
Sbjct: 414  LILAWALSIHKCQGMTLNNLHTDLYRVFGFGMVYVALSRVKSL 456


>ref|XP_007216310.1| hypothetical protein PRUPE_ppa019701mg [Prunus persica]
            gi|462412460|gb|EMJ17509.1| hypothetical protein
            PRUPE_ppa019701mg [Prunus persica]
          Length = 549

 Score =  431 bits (1109), Expect = e-118
 Identities = 236/396 (59%), Positives = 289/396 (72%), Gaps = 6/396 (1%)
 Frame = +2

Query: 134  KGRSVFITGSAGTGTSFLLQQAIKLLKQTHNPQEVFVTASTGVDACALNGRTLHSFAGGR 313
            +G+SVFITGSAGTG + L++  IK LK+ H P +VFVTA TGV ACA++G+TLHSFAG  
Sbjct: 68   EGKSVFITGSAGTGKTILVKHIIKQLKKRHGPSKVFVTAPTGVAACAISGQTLHSFAG-- 125

Query: 314  LGLGDSDRELLLTDVSNNRQVRKRWRVAKALVIDEVSMISGEFFDKLEYIARKIRPQSRI 493
            +G   +DR+ LL  +S N +  KRWR A+ALV+DE SM+  E F+ L++IAR I+    +
Sbjct: 126  IGCAMADRDTLLHRISKNDKAYKRWRKAEALVLDESSMVDAELFESLDFIARAIKQVDEV 185

Query: 494  KAPWGGIQLIVSGDFFQLPPVIDL--SVKKEFAFEAECWNNSFDLQIELTRVFRQSDTQL 667
               WGGIQL+VSGDFFQLPPV     S  KEFAFEAECW++SFDLQ+ LT+VFRQSD QL
Sbjct: 186  ---WGGIQLVVSGDFFQLPPVKPQQNSGGKEFAFEAECWDSSFDLQVNLTKVFRQSDPQL 242

Query: 668  IDLLQGIRRGCKDEKHLRILHQC--NAEPGDIMKDVPVEVPRLYPRNQDVKRVNEEKLKR 841
            I LLQGIRRG  D + L++L Q    AEP          V +LYPRN+DV RVN  +L  
Sbjct: 243  IKLLQGIRRGESDPEDLKLLEQSCSKAEPDPT-------VVQLYPRNEDVNRVNSSRLAS 295

Query: 842  LGGDIVKYIAVDSGKEPWKRQLKQGIAPEELEICLGARVMLVKNKDLESGLVNGATGTVT 1021
            LG ++V Y AVDSG++  KRQL+QGIAP+E+ +C  ARVMLVKN +   GLVNGATGTVT
Sbjct: 296  LGNELVVYTAVDSGEDSLKRQLEQGIAPKEIALCEDARVMLVKNLNTWRGLVNGATGTVT 355

Query: 1022 DFV--KDGRVWGICERGVLPKVKFDCGVEMVVEPERWDVMEGERVFATRKQVPLILSWAL 1195
             F   +D  V  IC+ G+LP V+FD G+EM +EP  W   EG+ V A R+Q+PLIL+WA 
Sbjct: 356  GFYESEDVGVTRICDDGLLPVVRFDSGLEMTIEPNTWTANEGDSV-AKREQLPLILAWAS 414

Query: 1196 SIHKCQGMTLDILHTDLSRAFGCGMVYVALSRVRSL 1303
            SIHKCQGMTLD LHTDLSRAF  GMVYVALSRVRSL
Sbjct: 415  SIHKCQGMTLDRLHTDLSRAFENGMVYVALSRVRSL 450


>ref|XP_006586570.1| PREDICTED: ATP-dependent DNA helicase PIF1-like [Glycine max]
          Length = 516

 Score =  426 bits (1096), Expect = e-117
 Identities = 227/412 (55%), Positives = 288/412 (69%), Gaps = 10/412 (2%)
 Frame = +2

Query: 98   NETIRTARTNPEKGRSVFITGSAGTGTSFLLQQAIKLLKQTHNPQEVFVTASTGVDACAL 277
            +E  +   ++  +G+SVFITGSAGTG + LL++ IK L + H P  V+VTASTGV ACAL
Sbjct: 55   SEEQKQVLSSVSEGKSVFITGSAGTGKTLLLEEIIKFLNRLHTPYGVYVTASTGVAACAL 114

Query: 278  NGRTLHSFAGGRLGLGDSDRELLLTDVSNNRQVRKRWRVAKALVIDEVSMISGEFFDKLE 457
             G+TLHSFAG  +   D D +LL+  V +N+   +RWR  +ALVIDE+SM+S + F+ LE
Sbjct: 115  KGQTLHSFAGIGIIFSDDDPQLLVERVLSNQGACRRWRKVEALVIDEISMVSAKLFESLE 174

Query: 458  YIARKIRPQSRIKAPWGGIQLIVSGDFFQLPPVID------LSVKKEFAFEAECWNNSFD 619
            ++AR++R    +   WGGIQL+VSGDFFQLPPV+        S    +AFEAECWN SFD
Sbjct: 175  FVAREMR---GVDETWGGIQLVVSGDFFQLPPVVSNKDYCCSSQGVMYAFEAECWNRSFD 231

Query: 620  LQIELTRVFRQSDTQLIDLLQGIRRGCKDEKHLRILHQCNAEPGDIMKDVPVEVPRLYPR 799
            LQ+ELTRVFRQSD  L  LL+GIRRG  D + L  L   N   G    D    + +L+P 
Sbjct: 232  LQVELTRVFRQSDYGLTRLLEGIRRGESDPQDLEFLE--NLCLGSSECDHDPSIVQLFPL 289

Query: 800  NQDVKRVNEEKLKRLGGDIVKYIAVDSGKEPWKRQLKQGIAPEELEICLGARVMLVKNKD 979
            N+DV+RVN+E+L+ L  D+V Y AVDSGK  WK  L+ GI P+E+ +C GARVMLVKN D
Sbjct: 290  NKDVERVNDERLRSLQKDVVVYRAVDSGKGHWKGNLRYGIVPDEISLCEGARVMLVKNLD 349

Query: 980  LESGLVNGATGTVTDFV----KDGRVWGICERGVLPKVKFDCGVEMVVEPERWDVMEGER 1147
             E GLVNGATG V  F     ++  + GIC   VLP VKFD G  + ++P +W +M+G  
Sbjct: 350  TEHGLVNGATGVVVGFSWSLGEEEHLSGICNDKVLPVVKFDGGKFLTIKPAKWHLMDGPE 409

Query: 1148 VFATRKQVPLILSWALSIHKCQGMTLDILHTDLSRAFGCGMVYVALSRVRSL 1303
            V A RKQ+PLIL+WA+SIHKCQGMTL+ +HTDLSRAFGCGMVYVALSRVRSL
Sbjct: 410  VVACRKQIPLILAWAMSIHKCQGMTLERVHTDLSRAFGCGMVYVALSRVRSL 461


>ref|XP_007048817.1| DNA repair and recombination protein pif1, putative [Theobroma cacao]
            gi|508701078|gb|EOX92974.1| DNA repair and recombination
            protein pif1, putative [Theobroma cacao]
          Length = 475

 Score =  426 bits (1096), Expect = e-117
 Identities = 225/393 (57%), Positives = 287/393 (73%), Gaps = 4/393 (1%)
 Frame = +2

Query: 137  GRSVFITGSAGTGTSFLLQQAIKLLKQTHNPQEVFVTASTGVDACALNGRTLHSFAGGRL 316
            G SVFITGSAGTG + LL+  IK+LK+T+    VFVTASTG+ ACAL G+TLHSFAG R+
Sbjct: 68   GLSVFITGSAGTGKTVLLKHIIKILKKTYGESGVFVTASTGIAACALGGQTLHSFAGIRI 127

Query: 317  GLGDSDRELLLTDVSNNRQVRKRWRVAKALVIDEVSMISGEFFDKLEYIARKIRPQSRIK 496
            G  D +R +LL  V N+R+ R+RW  A+ LVIDE+S++  + FDKLEYIA+ +R   ++ 
Sbjct: 128  G--DGNRGMLLDLVLNDREARRRWNKAQVLVIDEISLVDADLFDKLEYIAKTVRESDKV- 184

Query: 497  APWGGIQLIVSGDFFQLPPVI---DLSVKKEFAFEAECWNNSFDLQIELTRVFRQSDTQL 667
              WGGI+L+VSGDFFQLPP+    D S +KEFAFEA+CW+ SFD+Q+ELT++FRQS+ + 
Sbjct: 185  --WGGIRLVVSGDFFQLPPIFKGHDPS-RKEFAFEADCWDASFDIQVELTKIFRQSENRF 241

Query: 668  IDLLQGIRRGCKDEKHLRILHQ-CNAEPGDIMKDVPVEVPRLYPRNQDVKRVNEEKLKRL 844
            I LLQG+RRG  D + L+ L Q C+A       +      RLYPR  DV +VNEEK+K L
Sbjct: 242  IKLLQGVRRGNSDPEDLQFLKQSCSAS------EPHPSAVRLYPRIDDVNKVNEEKMKAL 295

Query: 845  GGDIVKYIAVDSGKEPWKRQLKQGIAPEELEICLGARVMLVKNKDLESGLVNGATGTVTD 1024
              + V Y A+D GK+PWKRQL  G+AP++L +C GARVML+KN ++   LVNGATG VT 
Sbjct: 296  SEEQVIYEAIDRGKKPWKRQLALGLAPDKLVLCKGARVMLIKNLNVMHRLVNGATGIVTG 355

Query: 1025 FVKDGRVWGICERGVLPKVKFDCGVEMVVEPERWDVMEGERVFATRKQVPLILSWALSIH 1204
            F +      +    +LP VKFD G EMV+EP++W VM G R  A R Q+PL+L+WALSIH
Sbjct: 356  FTETKGGTVLSPDNLLPVVKFDSGPEMVIEPQKWYVMVGSRPVAWRLQLPLVLAWALSIH 415

Query: 1205 KCQGMTLDILHTDLSRAFGCGMVYVALSRVRSL 1303
            KCQGM+LD +HTDLSRAFG GMVYVALSRVRSL
Sbjct: 416  KCQGMSLDRIHTDLSRAFGYGMVYVALSRVRSL 448


>ref|XP_004306279.1| PREDICTED: DNA repair and recombination protein pif1,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 515

 Score =  420 bits (1080), Expect = e-115
 Identities = 230/394 (58%), Positives = 279/394 (70%), Gaps = 4/394 (1%)
 Frame = +2

Query: 134  KGRSVFITGSAGTGTSFLLQQAIKLLKQTHNPQEVFVTASTGVDACALNGRTLHSFAGGR 313
            +G+SVFITGSAGTG + L+Q  IKLLK+ H   +VFVTA TGV ACA+ G+TLH FAG  
Sbjct: 67   EGKSVFITGSAGTGKTILVQHVIKLLKRQHRASKVFVTAPTGVAACAIGGQTLHCFAG-- 124

Query: 314  LGLGDSDRELLLTDVSNNRQVRKRWRVAKALVIDEVSMISGEFFDKLEYIARKIRPQSRI 493
            +G   +DRE LL  +  N +   RW   KALVIDE+SM+  EFF+ LEYIAR IR   ++
Sbjct: 125  IGYPMADRETLLHRIVLNNKAYNRWLKVKALVIDEISMVDTEFFESLEYIARNIR---QV 181

Query: 494  KAPWGGIQLIVSGDFFQLPPVIDL--SVKKEFAFEAECWNNSFDLQIELTRVFRQSDTQL 667
               WGGIQ++V GDFFQLPP+     S  +EFAFEA+CWN+SFDLQ+ LT+VFRQSD +L
Sbjct: 182  NKSWGGIQIVVGGDFFQLPPIKPQQNSGGREFAFEADCWNSSFDLQVSLTKVFRQSDPRL 241

Query: 668  IDLLQGIRRGCKDEKHLRILHQCNAEPGDIMKDVPVEVPRLYPRNQDVKRVNEEKLKRLG 847
            I LL GIRRG  D + L  L Q  +E      +    V +LYPR +DV RVN  +L  LG
Sbjct: 242  IKLLNGIRRGESDPEDLMFLEQSCSEA-----EPDPSVVQLYPRIEDVNRVNASRLVSLG 296

Query: 848  GDIVKYIAVDSGKEPWKRQLKQGIAPEELEICLGARVMLVKNKDLESGLVNGATGTVTDF 1027
             + V Y A+DSG+E  K QL+QGIAP+E+ +C  ARVMLVKN +   GLVNGATGTV  F
Sbjct: 297  NEFVIYTAIDSGEESRKSQLEQGIAPKEVTLCKDARVMLVKNLNTWRGLVNGATGTVQGF 356

Query: 1028 V--KDGRVWGICERGVLPKVKFDCGVEMVVEPERWDVMEGERVFATRKQVPLILSWALSI 1201
               K+  + G+C    LP VKFD G EM++EPE W V EG++V A RKQVPLIL+WA SI
Sbjct: 357  YVPKNKDIAGVCH--ALPIVKFDSGPEMLIEPETWAVTEGDKVVAERKQVPLILAWASSI 414

Query: 1202 HKCQGMTLDILHTDLSRAFGCGMVYVALSRVRSL 1303
            HKCQGMTLD LHTDLS+AF  GMVYVALSRVRSL
Sbjct: 415  HKCQGMTLDCLHTDLSKAFENGMVYVALSRVRSL 448


>ref|XP_006380622.1| hypothetical protein POPTR_0007s09900g [Populus trichocarpa]
            gi|550334512|gb|ERP58419.1| hypothetical protein
            POPTR_0007s09900g [Populus trichocarpa]
          Length = 540

 Score =  413 bits (1062), Expect = e-113
 Identities = 230/423 (54%), Positives = 292/423 (69%), Gaps = 7/423 (1%)
 Frame = +2

Query: 56   VTKTSSALQQQFGINETIRTARTNPEKGRSVFITGSAGTGTSFLLQQAIKLLKQTHNPQE 235
            + K +   Q  F   +  +   ++  +G SVFITGSAGTG + LL+  I +LK  H   +
Sbjct: 89   IPKDTKTHQPLFEWAQEQKNIFSHVHRGASVFITGSAGTGKTVLLKHIIDILKDVHGKSK 148

Query: 236  VFVTASTGVDACALNGRTLHSFAGGRLGLGDSDRELLLTDVSNNRQVRKRWRVAKALVID 415
            VFVTASTG+ ACAL G+TLHSFA   +G+ ++D   LL  V  N+   KRW+ AKALVID
Sbjct: 149  VFVTASTGIAACALQGQTLHSFAS--IGIQNADSGTLLDKVKMNKHACKRWKKAKALVID 206

Query: 416  EVSMISGEFFDKLEYIARKIRPQSRIKAPWGGIQLIVSGDFFQLPPVIDLSVK--KEFAF 589
            E+SMIS + F+ LEYIAR IR    +   WGGIQLIV GDFFQLPPVI       KEFAF
Sbjct: 207  EISMISADLFESLEYIARDIRGSEVV---WGGIQLIVCGDFFQLPPVIKQQKLSGKEFAF 263

Query: 590  EAECWNNSFDLQIELTRVFRQSDTQLIDLLQGIRRGCKDEKHLRILHQ-CNAEPGDIMKD 766
            EA+CWN SFDLQ+ELT+VFRQSD +LI +LQGIR+G  D + L++L + C+    D +  
Sbjct: 264  EADCWNASFDLQVELTQVFRQSDPRLIKMLQGIRKGETDAEDLQLLEESCSMNKQDSL-- 321

Query: 767  VPVEVPRLYPRNQDVKRVNEEKLKRLGGDIVKYIAVDSGKEPWKRQLKQGIAPEELEICL 946
                V  LYPR  DV++VNEE++K LG   V Y A DSG E  K+QL QGI P++L +C+
Sbjct: 322  ----VVWLYPRINDVEKVNEERMKSLGESTVTYAAADSGLEHRKKQLNQGIVPDQLVLCV 377

Query: 947  GARVMLVKNKDLESGLVNGATGTVTDFV----KDGRVWGICERGVLPKVKFDCGVEMVVE 1114
            GARVML+ N ++E  L NGATGTVT FV    K+ R   I    + P+VKFD G E+++E
Sbjct: 378  GARVMLIMNLNIERNLCNGATGTVTGFVPVEDKNARKSDI----LFPQVKFDRGPEILIE 433

Query: 1115 PERWDVMEGERVFATRKQVPLILSWALSIHKCQGMTLDILHTDLSRAFGCGMVYVALSRV 1294
            P+++++ EG+ V A R Q+PLIL+WA+SIHKCQGMTLD   TDLSRAFG GMVYVALSRV
Sbjct: 434  PQKFEIFEGDIVVAWRYQIPLILAWAISIHKCQGMTLDHAQTDLSRAFGYGMVYVALSRV 493

Query: 1295 RSL 1303
            RSL
Sbjct: 494  RSL 496


>ref|XP_002520397.1| conserved hypothetical protein [Ricinus communis]
            gi|223540444|gb|EEF42013.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 512

 Score =  387 bits (994), Expect = e-105
 Identities = 216/395 (54%), Positives = 270/395 (68%), Gaps = 5/395 (1%)
 Frame = +2

Query: 134  KGRSVFITGSAGTGTSFLLQQAIKLLKQTHNPQEVFVTASTGVDACALNGRTLHSFAGGR 313
            +G+SVFITGSAGTG + LL   I +LK+ H    V VTASTG  ACA+ G+TLHSFAG  
Sbjct: 53   RGKSVFITGSAGTGKTVLLGHIISILKRAHGSSGVVVTASTGSAACAIKGQTLHSFAG-- 110

Query: 314  LGLGDSDRELLLTDVSNNRQVRKRWRVAKALVIDEVSMISGEFFDKLEYIARKIRPQSRI 493
             G+GD D + LL  V  N +  KRW   K LV+DE+SMI G  FD LE+IAR+IR  + +
Sbjct: 111  FGIGDGDPKALLERVVRNSRACKRWNQVKVLVVDEISMIGGNTFDTLEFIARQIRGSNNV 170

Query: 494  KAPWGGIQLIVSGDFFQLPPVIDLSVK--KEFAFEAECWNNSFDLQIELTRVFRQSDTQL 667
               WGGIQLIVSGDFFQLP V+  S    KEFAFEA+CWN SF  Q+E+T+VFRQ+D QL
Sbjct: 171  ---WGGIQLIVSGDFFQLPLVLKKSNPSGKEFAFEADCWNRSFHAQVEITKVFRQTDPQL 227

Query: 668  IDLLQGIRRGCKDEKHLRILHQC--NAEPGDIMKDVPVEVPRLYPRNQDVKRVNEEKLKR 841
            I+LLQGIR+G  D + L++L QC  N EP            RLYPR +DV +VNE++LK 
Sbjct: 228  INLLQGIRKGVIDTEDLKLLEQCCSNNEPDP-------SAVRLYPRIEDVNKVNEKRLKS 280

Query: 842  LGGDIVKYIAVDSGKEPWKRQLKQGIAPEELEICLGARVMLVKNKDLESGLVNGATGTVT 1021
            LG  IV Y AVD G    K  LKQG+A ++LEIC GARVML+KN  + S L NGATGTV 
Sbjct: 281  LGEKIVAYKAVDGGTR--KELLKQGMAQDQLEICKGARVMLIKNLHVWSKLCNGATGTVI 338

Query: 1022 DFVKD-GRVWGICERGVLPKVKFDCGVEMVVEPERWDVMEGERVFATRKQVPLILSWALS 1198
             FV+    V  +    +LP +KFD G   V++P++W+  EG+   A R Q+PL L++ALS
Sbjct: 339  GFVEPYDDVIDLFPDNLLPVIKFDSGKVTVIKPQKWECYEGDDFVAWRSQLPLRLAYALS 398

Query: 1199 IHKCQGMTLDILHTDLSRAFGCGMVYVALSRVRSL 1303
            IHKCQGMT+D L+TDLSR+F  GMVY  LSR R++
Sbjct: 399  IHKCQGMTIDCLYTDLSRSFIYGMVYAVLSRGRTM 433


>ref|XP_002975258.1| hypothetical protein SELMODRAFT_451567 [Selaginella moellendorffii]
            gi|300156832|gb|EFJ23459.1| hypothetical protein
            SELMODRAFT_451567 [Selaginella moellendorffii]
          Length = 580

 Score =  341 bits (874), Expect = 5e-91
 Identities = 195/396 (49%), Positives = 256/396 (64%), Gaps = 8/396 (2%)
 Frame = +2

Query: 140  RSVFITGSAGTGTSFLLQQAIKLLKQTHNPQEVFVTASTGVDACALNGRTLHSFAGGRLG 319
            +SVF+TGSAGTG S++L++AI++L+  ++P  V+VTASTG+ ACA+ G T H+FAG  +G
Sbjct: 171  QSVFVTGSAGTGKSYILERAIQVLRTVYHPSAVYVTASTGIAACAIGGTTFHAFAG--VG 228

Query: 320  LGDSDRELLLTDVSNNRQVRKRWRVAKALVIDEVSMISGEFFDKLEYIARKIRPQSRIKA 499
            +G S +E L+  V  +++ ++RW  A ALVIDE+SMI  E FDK++++ R +R   R K 
Sbjct: 229  IGLSKKEQLVDMVMRSKEKKQRWLNAAALVIDEISMIDAELFDKVDFVGRAVR---RSKE 285

Query: 500  PWGGIQLIVSGDFFQLPPVIDLSVKKEFAFEAECWNNSFDLQIELTRVFRQSDTQLIDLL 679
             +GG+QLIV+GDFFQLPPV      K F F A+CW   FDLQ+ELT+VFRQSD + + +L
Sbjct: 286  RFGGLQLIVTGDFFQLPPVQKPGETKSFVFSAKCWKECFDLQMELTQVFRQSDREFVGML 345

Query: 680  QGIRRG-CK--DEKHLRILHQCNAEPGDIMKDVPVEVPRLYPRNQDVKRVNEEKLKRLG- 847
              IRRG C    E  L+     +  PG       +E  RLYPR  DV R NE+KL+ L  
Sbjct: 346  NEIRRGECSFATETRLKSCTSISTAPG-------IEPTRLYPRRADVDRENEQKLRSLNP 398

Query: 848  -GDIVKYIAVDSGKEPWKRQLKQGIAPEELEICLGARVMLVKNKDLESGLVNGATGTVTD 1024
                V + A DSG+    + L    A  E+ + +GA+VML+KN   E GLVNGA G V  
Sbjct: 399  SSKSVTFSAKDSGRT---QMLNGSRAEAEITLAIGAQVMLIKNLGTEQGLVNGARGIVVG 455

Query: 1025 FVKDGRV-WGICERGVLPKVKFDCG--VEMVVEPERWDVMEGERVFATRKQVPLILSWAL 1195
            F    +    I   G LP V+F+     E ++ PE W VMEGE   A R Q+PLIL+WAL
Sbjct: 456  FTAPEKSELRISPGGGLPVVRFNHSGSSEWIIRPEAWSVMEGEVEVAKRLQLPLILAWAL 515

Query: 1196 SIHKCQGMTLDILHTDLSRAFGCGMVYVALSRVRSL 1303
            S+HKCQGMTLD + TDLSR F  GMVYVALSRVRSL
Sbjct: 516  SVHKCQGMTLDCVETDLSRTFEYGMVYVALSRVRSL 551


>ref|XP_002987435.1| hypothetical protein SELMODRAFT_451566 [Selaginella moellendorffii]
            gi|300144841|gb|EFJ11522.1| hypothetical protein
            SELMODRAFT_451566 [Selaginella moellendorffii]
          Length = 580

 Score =  341 bits (874), Expect = 5e-91
 Identities = 195/396 (49%), Positives = 256/396 (64%), Gaps = 8/396 (2%)
 Frame = +2

Query: 140  RSVFITGSAGTGTSFLLQQAIKLLKQTHNPQEVFVTASTGVDACALNGRTLHSFAGGRLG 319
            +SVF+TGSAGTG S++L++AI++L+  ++P  V+VTASTG+ ACA+ G T H+FAG  +G
Sbjct: 171  QSVFVTGSAGTGKSYILERAIQVLRTVYHPSAVYVTASTGIAACAIGGTTFHAFAG--VG 228

Query: 320  LGDSDRELLLTDVSNNRQVRKRWRVAKALVIDEVSMISGEFFDKLEYIARKIRPQSRIKA 499
            +G S +E L+  V  +++ ++RW  A ALVIDE+SMI  E FDK++++ R +R   R K 
Sbjct: 229  IGLSKKEQLVDMVMRSKEKKQRWLNAAALVIDEISMIDAELFDKVDFVGRAVR---RSKE 285

Query: 500  PWGGIQLIVSGDFFQLPPVIDLSVKKEFAFEAECWNNSFDLQIELTRVFRQSDTQLIDLL 679
             +GG+QLIV+GDFFQLPPV      K F F A+CW   FDLQ+ELT+VFRQSD + + +L
Sbjct: 286  RFGGLQLIVTGDFFQLPPVQKPGETKSFVFNAKCWKECFDLQMELTQVFRQSDREFVGML 345

Query: 680  QGIRRG-CK--DEKHLRILHQCNAEPGDIMKDVPVEVPRLYPRNQDVKRVNEEKLKRLG- 847
              IRRG C    E  L+     +  PG       +E  RLYPR  DV R NE+KL+ L  
Sbjct: 346  NEIRRGECSFATETRLKSCTSISTAPG-------IEPTRLYPRRADVDRENEQKLRSLNP 398

Query: 848  -GDIVKYIAVDSGKEPWKRQLKQGIAPEELEICLGARVMLVKNKDLESGLVNGATGTVTD 1024
                V + A DSG+    + L    A  E+ + +GA+VML+KN   E GLVNGA G V  
Sbjct: 399  SSKSVTFSAKDSGRT---QMLNGSRAEAEITLAIGAQVMLIKNLGTEQGLVNGARGIVVG 455

Query: 1025 FVKDGRV-WGICERGVLPKVKFDCG--VEMVVEPERWDVMEGERVFATRKQVPLILSWAL 1195
            F    +    I   G LP V+F+     E ++ PE W VMEGE   A R Q+PLIL+WAL
Sbjct: 456  FTAPEKSELRISPGGGLPVVRFNHSGSSEWIIRPEAWSVMEGEVEVAKRLQLPLILAWAL 515

Query: 1196 SIHKCQGMTLDILHTDLSRAFGCGMVYVALSRVRSL 1303
            S+HKCQGMTLD + TDLSR F  GMVYVALSRVRSL
Sbjct: 516  SVHKCQGMTLDCVETDLSRTFEYGMVYVALSRVRSL 551


>gb|EKC25648.1| ATP-dependent DNA helicase PIF1 [Crassostrea gigas]
          Length = 619

 Score =  291 bits (745), Expect = 4e-76
 Identities = 177/392 (45%), Positives = 239/392 (60%), Gaps = 2/392 (0%)
 Frame = +2

Query: 134  KGRSVFITGSAGTGTSFLLQQAIKLLKQTHNPQEVFVTASTGVDACALNGRTLHSFAGGR 313
            KG++VF TGSAGTG SFL+++ I  L     PQ  + TASTGV AC + G TLH+FAG  
Sbjct: 210  KGKNVFFTGSAGTGKSFLMRRIIGSLP----PQHTYATASTGVAACHIGGTTLHAFAG-- 263

Query: 314  LGLGDSDRELLLTDVSNNRQVRKRWRVAKALVIDEVSMISGEFFDKLEYIARKIRPQSRI 493
            +G G +  E  +  +++  Q+ ++WR    LVIDE+SM+SG FFDKLE +AR +R     
Sbjct: 264  IGSGSAPLEQCV-QLASRPQIAQQWRKCHHLVIDEISMVSGAFFDKLETVARVVRKNDN- 321

Query: 494  KAPWGGIQLIVSGDFFQLPPVIDLSVKKEFAFEAECWNNSFDLQIELTRVFRQSDTQLID 673
              P+GGIQLI+ GDF QLPPV   + KK F F+A+ W+    + +EL  V RQ+D   I 
Sbjct: 322  --PFGGIQLIICGDFLQLPPVTKGTDKKTFCFQAKSWSRCVQVNMELKEVRRQNDLSFIS 379

Query: 674  LLQGIRRG-CKDEKHLRILHQCNAEPGDIMKDVPVEVPRLYPRNQDVKRVNEEKLKRLGG 850
            +LQ IR G C +E H +IL Q      +I K+  +   RL    +DV ++N+  L +L G
Sbjct: 380  ILQNIRLGKCSEETH-QILRQTVHH--EIQKN-GILATRLCTHKEDVNKINQYHLGKLQG 435

Query: 851  DIVKYIAVDSGKEPWKRQLKQ-GIAPEELEICLGARVMLVKNKDLESGLVNGATGTVTDF 1027
            +   ++AVD G+E +K QL+     P+++ + +GA+VML KN D++ GLVNGA G V  F
Sbjct: 436  EEKTFVAVD-GEEAYKDQLEVLSPVPKKVVLKVGAQVMLAKNLDVQRGLVNGARGVVVGF 494

Query: 1028 VKDGRVWGICERGVLPKVKFDCGVEMVVEPERWDVMEGERVFATRKQVPLILSWALSIHK 1207
             K  + +        P VKF  G E V+ P RW       VF  RKQVPL L+WA+SIHK
Sbjct: 495  DKKNQDY--------PLVKFVSGEEEVIRPVRWTFKVSGAVFINRKQVPLKLAWAISIHK 546

Query: 1208 CQGMTLDILHTDLSRAFGCGMVYVALSRVRSL 1303
             QGMTLD +   LSR F  G  YVALSR +SL
Sbjct: 547  SQGMTLDCVEMSLSRVFEAGQTYVALSRAKSL 578


>ref|XP_004359275.1| hypothetical protein DFA_01309 [Dictyostelium fasciculatum]
            gi|328873058|gb|EGG21425.1| hypothetical protein
            DFA_01309 [Dictyostelium fasciculatum]
          Length = 1554

 Score =  290 bits (743), Expect = 7e-76
 Identities = 172/418 (41%), Positives = 243/418 (58%), Gaps = 28/418 (6%)
 Frame = +2

Query: 134  KGRSVFITGSAGTGTSFLLQQAIKLLKQTHNPQEVFVTASTGVDACALNGRTLHSFAGGR 313
            +G+++F TGSAGTG SF+L++ +K L+Q +   +V VTASTG+ AC++ G TLHSFAG  
Sbjct: 285  EGKNLFFTGSAGTGKSFVLKEIVKCLRQLYGSDKVHVTASTGIAACSVGGTTLHSFAG-- 342

Query: 314  LGLGDSDRELLLTDVSNNRQVRKRWRVAKALVIDEVSMISGEFFDKLEYIARKIRPQSRI 493
            + LGD      +T + NN+ V  RWR  KAL++DEVSMIS + FDK+E IAR IR   R 
Sbjct: 343  VSLGDKSARDYITYIENNQTVFNRWRTCKALIVDEVSMISSDLFDKIEEIARSIRKSKR- 401

Query: 494  KAPWGGIQLIVSGDFFQLPPV--------------------------IDLSVKKE--FAF 589
               +GG+Q+I+ GDFFQL PV                          +D S K+   + F
Sbjct: 402  --SFGGVQVILVGDFFQLSPVTNNQQNQNNNNNYGGGGDPADDLLSMLDQSAKRASPYCF 459

Query: 590  EAECWNNSFDLQIELTRVFRQSDTQLIDLLQGIRRGCKDEKHLRILHQCNAEPGDIMKDV 769
            +A+CW +  +  I L +VFRQ D+Q +DLL  IR G  D K +  L+Q      ++ +  
Sbjct: 460  DAKCWESVIERCILLRQVFRQKDSQFVDLLNQIRFGTFDYKSIDYLNQ-KCVNNNLQRSD 518

Query: 770  PVEVPRLYPRNQDVKRVNEEKLKRLGGDIVKYIAVDSGKEPWKRQLKQGIAPEELEICLG 949
             +    LYP+   V + N++KL +L  + + + AVD G + +++      AP+ L + +G
Sbjct: 519  GIIPTILYPKRIQVDKENQQKLDQLTTEGMTFTAVDVGSDNYRKTFDNMQAPQSLTLKIG 578

Query: 950  ARVMLVKNKDLESGLVNGATGTVTDFVKDGRVWGICERGVLPKVKFDCGVEMVVEPERWD 1129
            ++V+L+KN D E GLVNGA G V  F  D  +       V P V+F  G E+VV  E W 
Sbjct: 579  SQVILLKNLDFEQGLVNGARGVVIGF-SDSDI-------VQPVVRFASGAEVVVGIEIWK 630

Query: 1130 VMEGERVFATRKQVPLILSWALSIHKCQGMTLDILHTDLSRAFGCGMVYVALSRVRSL 1303
            +  G    A+R+Q+PL L+WAL+IHK QGMT+D L  DL   F  G  YVALSR  SL
Sbjct: 631  IEIGSLTVASRRQLPLALAWALTIHKSQGMTIDRLIVDLDGTFQNGQAYVALSRATSL 688


>ref|XP_004343985.1| zinc knuckle domain containing protein [Acanthamoeba castellanii str.
            Neff] gi|440799538|gb|ELR20582.1| zinc knuckle domain
            containing protein [Acanthamoeba castellanii str. Neff]
          Length = 668

 Score =  285 bits (730), Expect = 2e-74
 Identities = 173/400 (43%), Positives = 230/400 (57%), Gaps = 10/400 (2%)
 Frame = +2

Query: 134  KGRSVFITGSAGTGTSFLLQQAIKLLKQTHNPQEVFVTASTGVDACALNGRTLHSFAGGR 313
            +G S+F TGSAGTG S LL++ ++LL++ H    V VTASTG+ AC + G TLHS+AG  
Sbjct: 243  RGNSLFFTGSAGTGKSLLLREMVRLLREIHGDDAVHVTASTGLAACNIGGCTLHSYAG-- 300

Query: 314  LGLGDSDRELLLTDVSNNRQVRKRWRVAKALVIDEVSMISGEFFDKLEYIARKIRPQSRI 493
            +GLG+  +E+L+T V + ++ R RW   K L+IDEVSM+ G  FDKLEY+ARK+R     
Sbjct: 301  VGLGEQSQEVLVTKVLSTKRSRDRWVSTKVLIIDEVSMLEGTLFDKLEYVARKVR---NY 357

Query: 494  KAPWGGIQLIVSGDFFQLPPVIDLSVKKEFAFEAECWNNSFDLQIELTRVFRQSDTQLID 673
             AP+GGIQLI+SGDF Q          K F FE+  W       I LT VFRQSD   + 
Sbjct: 358  DAPFGGIQLILSGDFLQ---------TKFFCFESAAWKKVVREVIVLTHVFRQSDNAFVA 408

Query: 674  LLQGIRRGCKDEKHLRILHQCNAEPGDIMK-----DVPVEVPRLYPRNQDVKRVNEEKLK 838
            LL  +R G   E+   +L +C     D  +     D  ++   LYP  +DV   N ++L 
Sbjct: 409  LLNDLRVGKVTEEGRSMLARCMIPYHDRARSIHRGDDRIQATLLYPHRRDVDGENTKRLA 468

Query: 839  RLGGDIVKYIAVDSGKEPWKRQLKQGI-APEELEICLGARVMLVKNKDLESGLVNGATGT 1015
             L G    Y AVDSG EP++  L +   AP+ LE+ L A+V+L+KN D    LVNGA G 
Sbjct: 469  ELAGTSRVYRAVDSGVEPYRSMLARNCSAPDVLELKLNAQVILLKNLDSALELVNGARGV 528

Query: 1016 VTDFVK----DGRVWGICERGVLPKVKFDCGVEMVVEPERWDVMEGERVFATRKQVPLIL 1183
            V DF K    D +     E    P+V F  GV  ++ PE W++       A R Q PL L
Sbjct: 529  VVDFKKPVKQDNKEESYDESKEYPEVLFTSGVRRLITPEEWNIGVAGEPQAWRVQCPLAL 588

Query: 1184 SWALSIHKCQGMTLDILHTDLSRAFGCGMVYVALSRVRSL 1303
            +WALSIHK QGM++  +  DL + +  G  YVALSR  SL
Sbjct: 589  AWALSIHKAQGMSISKVQMDLGKVWEYGQGYVALSRATSL 628


>ref|XP_003755701.1| PREDICTED: ATP-dependent DNA helicase PIF1 [Sarcophilus harrisii]
          Length = 641

 Score =  285 bits (729), Expect = 3e-74
 Identities = 175/391 (44%), Positives = 224/391 (57%), Gaps = 1/391 (0%)
 Frame = +2

Query: 134  KGRSVFITGSAGTGTSFLLQQAIKLLKQTHNPQEVFVTASTGVDACALNGRTLHSFAGGR 313
            +G+S+F TGSAGTG S+LL++ +  L     P+   VTASTGV AC + G TLH+FAG  
Sbjct: 218  RGKSIFFTGSAGTGKSYLLKRILGSLP----PKGTVVTASTGVAACHIGGTTLHAFAGIG 273

Query: 314  LGLGDSDRELLLTDVSNNRQVRKRWRVAKALVIDEVSMISGEFFDKLEYIARKIRPQSRI 493
             G     + + L   +N   VR+ W   + LVIDEVSM+    FDKLE +AR +R Q + 
Sbjct: 274  SGKAPLAQCVALAQRAN---VRQSWVSCQRLVIDEVSMVEASLFDKLEAVARAVRQQDK- 329

Query: 494  KAPWGGIQLIVSGDFFQLPPVIDLSVKKEFAFEAECWNNSFDLQIELTRVFRQSDTQLID 673
              P+GGIQLI+ GDF QLPPV   +   +F F+A+ W     L +ELT V+RQ+D   I 
Sbjct: 330  --PFGGIQLIICGDFLQLPPVTKNNQPPQFCFQAKSWRKCIQLTMELTEVWRQTDQTFIS 387

Query: 674  LLQGIRRG-CKDEKHLRILHQCNAEPGDIMKDVPVEVPRLYPRNQDVKRVNEEKLKRLGG 850
            LLQ +R G C DE    +  Q  A     ++   +   RL     DV   NE +L++L G
Sbjct: 388  LLQAVRLGRCSDE----VTQQLKATAKHKVEHDGILATRLCTHQDDVALTNERRLQQLPG 443

Query: 851  DIVKYIAVDSGKEPWKRQLKQGIAPEELEICLGARVMLVKNKDLESGLVNGATGTVTDFV 1030
             +  Y AVDS  +  K    Q      L++ LGA+VMLVKN  +  GLVNGA G V  F 
Sbjct: 444  QVYSYEAVDSDPDMVKTIDSQCPVSHLLQLKLGAQVMLVKNLAVSQGLVNGARGVVVGFE 503

Query: 1031 KDGRVWGICERGVLPKVKFDCGVEMVVEPERWDVMEGERVFATRKQVPLILSWALSIHKC 1210
             DGR         LP+VKF CGV  V+  ERW V        TR+Q+PL L+WALSIHK 
Sbjct: 504  ADGRG--------LPRVKFLCGVTEVIRTERWTVHGPGGQLLTRQQLPLRLAWALSIHKS 555

Query: 1211 QGMTLDILHTDLSRAFGCGMVYVALSRVRSL 1303
            QGMTLD +   L+R F  G  YVALSR RSL
Sbjct: 556  QGMTLDCVEISLARVFESGQAYVALSRARSL 586


>ref|XP_003507209.1| PREDICTED: ATP-dependent DNA helicase PIF1, partial [Cricetulus
            griseus]
          Length = 649

 Score =  283 bits (725), Expect = 9e-74
 Identities = 171/391 (43%), Positives = 225/391 (57%), Gaps = 1/391 (0%)
 Frame = +2

Query: 134  KGRSVFITGSAGTGTSFLLQQAIKLLKQTHNPQEVFVTASTGVDACALNGRTLHSFAGGR 313
            KG+S+F TGSAGTG S+LL+Q +  L     P     TASTGV AC + G TLH+FAG  
Sbjct: 228  KGQSIFFTGSAGTGKSYLLKQILGSLP----PTGTVATASTGVAACHIGGTTLHAFAG-- 281

Query: 314  LGLGDSDRELLLTDVSNNRQVRKRWRVAKALVIDEVSMISGEFFDKLEYIARKIRPQSRI 493
            +G G +     +  +++   VR+ W   + LVIDE+SM+  + FDKLE +AR +R Q   
Sbjct: 282  IGSGQAPLAQCVA-LAHRPGVRQGWLNCQRLVIDEISMVEADLFDKLEAVARAVRQQ--- 337

Query: 494  KAPWGGIQLIVSGDFFQLPPVIDLSVKKEFAFEAECWNNSFDLQIELTRVFRQSDTQLID 673
            K P+GGIQLI+ GDF QLPPV   S    F F+A+ W     + +ELT V+RQ+D   I 
Sbjct: 338  KKPFGGIQLIICGDFLQLPPVTKGSQHPRFCFQAKSWRKCVPVTLELTEVWRQADPTFIS 397

Query: 674  LLQGIRRG-CKDEKHLRILHQCNAEPGDIMKDVPVEVPRLYPRNQDVKRVNEEKLKRLGG 850
            LLQ +R G C DE    + HQ  A     +    +   RL     DV   NE++LK L G
Sbjct: 398  LLQAVRLGRCSDE----VTHQLRATAAHKVGRDGIVATRLCTHQDDVALTNEKRLKELPG 453

Query: 851  DIVKYIAVDSGKEPWKRQLKQGIAPEELEICLGARVMLVKNKDLESGLVNGATGTVTDFV 1030
            ++  + A+DS  E  +    Q      L++ LGA+VMLVKN  L  GLVNGA G V  F 
Sbjct: 454  EVHSFEAIDSDPELARTLDAQCPVSRVLQLKLGAQVMLVKNLSLSRGLVNGARGVVVGFE 513

Query: 1031 KDGRVWGICERGVLPKVKFDCGVEMVVEPERWDVMEGERVFATRKQVPLILSWALSIHKC 1210
             +GR         LP+V+F CGV  V+  +RW V      F +R+Q+PL L+WA+SIHK 
Sbjct: 514  SEGRG--------LPQVRFLCGVTEVIRTDRWTVQVTGGQFLSRQQLPLQLAWAMSIHKS 565

Query: 1211 QGMTLDILHTDLSRAFGCGMVYVALSRVRSL 1303
            QGM+LD +   L R F  G  YVALSR RSL
Sbjct: 566  QGMSLDCVEISLGRVFASGQAYVALSRARSL 596


>gb|EGW10989.1| ATP-dependent DNA helicase PIF1 [Cricetulus griseus]
            gi|537179139|gb|ERE75724.1| ATP-dependent DNA helicase
            PIF1 [Cricetulus griseus]
          Length = 637

 Score =  283 bits (725), Expect = 9e-74
 Identities = 171/391 (43%), Positives = 225/391 (57%), Gaps = 1/391 (0%)
 Frame = +2

Query: 134  KGRSVFITGSAGTGTSFLLQQAIKLLKQTHNPQEVFVTASTGVDACALNGRTLHSFAGGR 313
            KG+S+F TGSAGTG S+LL+Q +  L     P     TASTGV AC + G TLH+FAG  
Sbjct: 216  KGQSIFFTGSAGTGKSYLLKQILGSLP----PTGTVATASTGVAACHIGGTTLHAFAG-- 269

Query: 314  LGLGDSDRELLLTDVSNNRQVRKRWRVAKALVIDEVSMISGEFFDKLEYIARKIRPQSRI 493
            +G G +     +  +++   VR+ W   + LVIDE+SM+  + FDKLE +AR +R Q   
Sbjct: 270  IGSGQAPLAQCVA-LAHRPGVRQGWLNCQRLVIDEISMVEADLFDKLEAVARAVRQQ--- 325

Query: 494  KAPWGGIQLIVSGDFFQLPPVIDLSVKKEFAFEAECWNNSFDLQIELTRVFRQSDTQLID 673
            K P+GGIQLI+ GDF QLPPV   S    F F+A+ W     + +ELT V+RQ+D   I 
Sbjct: 326  KKPFGGIQLIICGDFLQLPPVTKGSQHPRFCFQAKSWRKCVPVTLELTEVWRQADPTFIS 385

Query: 674  LLQGIRRG-CKDEKHLRILHQCNAEPGDIMKDVPVEVPRLYPRNQDVKRVNEEKLKRLGG 850
            LLQ +R G C DE    + HQ  A     +    +   RL     DV   NE++LK L G
Sbjct: 386  LLQAVRLGRCSDE----VTHQLRATAAHKVGRDGIVATRLCTHQDDVALTNEKRLKELPG 441

Query: 851  DIVKYIAVDSGKEPWKRQLKQGIAPEELEICLGARVMLVKNKDLESGLVNGATGTVTDFV 1030
            ++  + A+DS  E  +    Q      L++ LGA+VMLVKN  L  GLVNGA G V  F 
Sbjct: 442  EVHSFEAIDSDPELARTLDAQCPVSRVLQLKLGAQVMLVKNLSLSRGLVNGARGVVVGFE 501

Query: 1031 KDGRVWGICERGVLPKVKFDCGVEMVVEPERWDVMEGERVFATRKQVPLILSWALSIHKC 1210
             +GR         LP+V+F CGV  V+  +RW V      F +R+Q+PL L+WA+SIHK 
Sbjct: 502  SEGRG--------LPQVRFLCGVTEVIRTDRWTVQVTGGQFLSRQQLPLQLAWAMSIHKS 553

Query: 1211 QGMTLDILHTDLSRAFGCGMVYVALSRVRSL 1303
            QGM+LD +   L R F  G  YVALSR RSL
Sbjct: 554  QGMSLDCVEISLGRVFASGQAYVALSRARSL 584


>ref|XP_785439.2| PREDICTED: ATP-dependent DNA helicase PIF1-like [Strongylocentrotus
            purpuratus]
          Length = 592

 Score =  282 bits (721), Expect = 3e-73
 Identities = 167/398 (41%), Positives = 227/398 (57%), Gaps = 10/398 (2%)
 Frame = +2

Query: 140  RSVFITGSAGTGTSFLLQQAIKLLKQTHNPQEVFVTASTGVDACALNGRTLHSFAGGRLG 319
            +S+F TGSAGTG SFLL+  I  L     P   F TASTGV AC + G TLH FAG   G
Sbjct: 176  QSIFFTGSAGTGKSFLLRHIISALP----PDSTFATASTGVAACHIGGTTLHQFAGIGSG 231

Query: 320  LGDSDRELLLTDVSNNRQVRKRWRVAKALVIDEVSMISGEFFDKLEYIARKIRPQSRIKA 499
             G   +   L ++++    R++WR  K L++DE+SMI G+FF KLE +AR I+   R   
Sbjct: 232  TGQLPQ---LIELASRPTRRQQWRKCKHLIVDEISMIDGDFFTKLEAVARVIK---RCDE 285

Query: 500  PWGGIQLIVSGDFFQLPPVIDLSVKKEFAFEAECWNNSFDLQIELTRVFRQSDTQLIDLL 679
            P+GGIQLI+ GDF QLPPV+    K++F F++  W+    +  EL  V RQ D   I++L
Sbjct: 286  PFGGIQLILCGDFLQLPPVVKRGEKQKFCFQSPAWHRCIQVNFELMEVKRQKDPAFINIL 345

Query: 680  QGIRRGCKDEKHLRILHQCNAEPGDIMKDVP--------VEVPRLYPRNQDVKRVNEEKL 835
            Q IR G           +C+AE  D +            +   RL    +DV ++N   L
Sbjct: 346  QKIRVG-----------RCSAEVTDCLTGTAKHCVDTEGIHATRLCTHKEDVDQLNNVHL 394

Query: 836  KRLGGDIVKYIAVDSGKEPWKRQLKQGIAPEELEICLGARVMLVKNKDLESGLVNGATGT 1015
             +L GD+  + A+DS     K+   Q    + +++ +GA+VML KN D+  GLVNGA G 
Sbjct: 395  NKLIGDVRVFEAMDSDPSLVKQTNSQCPVRQRIDLKIGAQVMLAKNLDVHKGLVNGARGV 454

Query: 1016 VTDFVKDGRVWGICERGVL--PKVKFDCGVEMVVEPERWDVMEGERVFATRKQVPLILSW 1189
            VT F          E G+   PKV+F  G+E V+ PERW +  G+ +  TR+Q+PL L+W
Sbjct: 455  VTGF----------ESGMKGNPKVRFMSGLEEVIRPERWSMCIGQSLILTRRQLPLKLAW 504

Query: 1190 ALSIHKCQGMTLDILHTDLSRAFGCGMVYVALSRVRSL 1303
            A+SIHK QGM+LD +   LSR F CG  YVALSR  SL
Sbjct: 505  AISIHKSQGMSLDCVEISLSRVFECGQAYVALSRATSL 542


>ref|XP_004914012.1| PREDICTED: ATP-dependent DNA helicase PIF1-like isoform X2 [Xenopus
            (Silurana) tropicalis]
          Length = 704

 Score =  281 bits (720), Expect = 3e-73
 Identities = 168/390 (43%), Positives = 233/390 (59%), Gaps = 1/390 (0%)
 Frame = +2

Query: 137  GRSVFITGSAGTGTSFLLQQAIKLLKQTHNPQEVFVTASTGVDACALNGRTLHSFAGGRL 316
            GR+VF TGSAGTG S+LL++ +  L     P+  + TASTGV AC + G TLH+FAG  +
Sbjct: 290  GRNVFFTGSAGTGKSYLLKRIVGALP----PKSTYATASTGVAACHIGGTTLHAFAG--I 343

Query: 317  GLGDSDRELLLTDVSNNRQVRKRWRVAKALVIDEVSMISGEFFDKLEYIARKIRPQSRIK 496
            G G +  E  + +++    VR+ W   K L+IDE+SM+ GEFFDKLE +AR +R +    
Sbjct: 344  GTGKASIEQCI-ELAKRPGVRQHWTGCKHLIIDEISMVEGEFFDKLEAVARAVRGKDE-- 400

Query: 497  APWGGIQLIVSGDFFQLPPVIDLSVKKEFAFEAECWNNSFDLQIELTRVFRQSDTQLIDL 676
             P+GGIQLIV GDF QLPPV   S + +F F+A  W     L +ELT V RQ+D   I L
Sbjct: 401  -PFGGIQLIVCGDFLQLPPVTQASSQTKFCFQARSWRKCIHLTMELTEVRRQTDKNFISL 459

Query: 677  LQGIRRG-CKDEKHLRILHQCNAEPGDIMKDVPVEVPRLYPRNQDVKRVNEEKLKRLGGD 853
            LQ IR G C D+   ++L   + +   + +D  +   RL     DV+  NE +L++L G+
Sbjct: 460  LQAIRLGRCTDDVSRKLLQTSSHK---VERD-GILATRLCTHKDDVEITNERRLQQLPGE 515

Query: 854  IVKYIAVDSGKEPWKRQLKQGIAPEELEICLGARVMLVKNKDLESGLVNGATGTVTDFVK 1033
               Y A+DS     K    Q    +++++  GA+VML KN D+  GLVNGA G VT F +
Sbjct: 516  SHLYEALDSDPMLVKTINAQCPVNQQIQLKKGAQVMLAKNLDVSRGLVNGARGVVTKFEE 575

Query: 1034 DGRVWGICERGVLPKVKFDCGVEMVVEPERWDVMEGERVFATRKQVPLILSWALSIHKCQ 1213
              +         LP V+F CGV  V++P+RW       ++ +R+Q+PL L+WA+SIHK Q
Sbjct: 576  GNKN--------LPVVRFLCGVTEVIKPDRWVFKGHGGIYLSRQQLPLKLAWAISIHKSQ 627

Query: 1214 GMTLDILHTDLSRAFGCGMVYVALSRVRSL 1303
            GM+LD +   LSR F  G  YVALSR R+L
Sbjct: 628  GMSLDCVEISLSRVFESGQAYVALSRARNL 657


>ref|XP_004914011.1| PREDICTED: ATP-dependent DNA helicase PIF1-like isoform X1 [Xenopus
            (Silurana) tropicalis]
          Length = 706

 Score =  281 bits (720), Expect = 3e-73
 Identities = 168/390 (43%), Positives = 233/390 (59%), Gaps = 1/390 (0%)
 Frame = +2

Query: 137  GRSVFITGSAGTGTSFLLQQAIKLLKQTHNPQEVFVTASTGVDACALNGRTLHSFAGGRL 316
            GR+VF TGSAGTG S+LL++ +  L     P+  + TASTGV AC + G TLH+FAG  +
Sbjct: 290  GRNVFFTGSAGTGKSYLLKRIVGALP----PKSTYATASTGVAACHIGGTTLHAFAG--I 343

Query: 317  GLGDSDRELLLTDVSNNRQVRKRWRVAKALVIDEVSMISGEFFDKLEYIARKIRPQSRIK 496
            G G +  E  + +++    VR+ W   K L+IDE+SM+ GEFFDKLE +AR +R +    
Sbjct: 344  GTGKASIEQCI-ELAKRPGVRQHWTGCKHLIIDEISMVEGEFFDKLEAVARAVRGKDE-- 400

Query: 497  APWGGIQLIVSGDFFQLPPVIDLSVKKEFAFEAECWNNSFDLQIELTRVFRQSDTQLIDL 676
             P+GGIQLIV GDF QLPPV   S + +F F+A  W     L +ELT V RQ+D   I L
Sbjct: 401  -PFGGIQLIVCGDFLQLPPVTQASSQTKFCFQARSWRKCIHLTMELTEVRRQTDKNFISL 459

Query: 677  LQGIRRG-CKDEKHLRILHQCNAEPGDIMKDVPVEVPRLYPRNQDVKRVNEEKLKRLGGD 853
            LQ IR G C D+   ++L   + +   + +D  +   RL     DV+  NE +L++L G+
Sbjct: 460  LQAIRLGRCTDDVSRKLLQTSSHK---VERD-GILATRLCTHKDDVEITNERRLQQLPGE 515

Query: 854  IVKYIAVDSGKEPWKRQLKQGIAPEELEICLGARVMLVKNKDLESGLVNGATGTVTDFVK 1033
               Y A+DS     K    Q    +++++  GA+VML KN D+  GLVNGA G VT F +
Sbjct: 516  SHLYEALDSDPMLVKTINAQCPVNQQIQLKKGAQVMLAKNLDVSRGLVNGARGVVTKFEE 575

Query: 1034 DGRVWGICERGVLPKVKFDCGVEMVVEPERWDVMEGERVFATRKQVPLILSWALSIHKCQ 1213
              +         LP V+F CGV  V++P+RW       ++ +R+Q+PL L+WA+SIHK Q
Sbjct: 576  GNKN--------LPVVRFLCGVTEVIKPDRWVFKGHGGIYLSRQQLPLKLAWAISIHKSQ 627

Query: 1214 GMTLDILHTDLSRAFGCGMVYVALSRVRSL 1303
            GM+LD +   LSR F  G  YVALSR R+L
Sbjct: 628  GMSLDCVEISLSRVFESGQAYVALSRARNL 657


>ref|NP_001016603.1| PIF1 5'-to-3' DNA helicase [Xenopus (Silurana) tropicalis]
          Length = 636

 Score =  281 bits (720), Expect = 3e-73
 Identities = 168/390 (43%), Positives = 233/390 (59%), Gaps = 1/390 (0%)
 Frame = +2

Query: 137  GRSVFITGSAGTGTSFLLQQAIKLLKQTHNPQEVFVTASTGVDACALNGRTLHSFAGGRL 316
            GR+VF TGSAGTG S+LL++ +  L     P+  + TASTGV AC + G TLH+FAG  +
Sbjct: 222  GRNVFFTGSAGTGKSYLLKRIVGALP----PKSTYATASTGVAACHIGGTTLHAFAG--I 275

Query: 317  GLGDSDRELLLTDVSNNRQVRKRWRVAKALVIDEVSMISGEFFDKLEYIARKIRPQSRIK 496
            G G +  E  + +++    VR+ W   K L+IDE+SM+ GEFFDKLE +AR +R +    
Sbjct: 276  GTGKASIEQCI-ELAKRPGVRQHWTGCKHLIIDEISMVEGEFFDKLEAVARAVRGKDE-- 332

Query: 497  APWGGIQLIVSGDFFQLPPVIDLSVKKEFAFEAECWNNSFDLQIELTRVFRQSDTQLIDL 676
             P+GGIQLIV GDF QLPPV   S + +F F+A  W     L +ELT V RQ+D   I L
Sbjct: 333  -PFGGIQLIVCGDFLQLPPVTQASSQTKFCFQARSWRKCIHLTMELTEVRRQTDKNFISL 391

Query: 677  LQGIRRG-CKDEKHLRILHQCNAEPGDIMKDVPVEVPRLYPRNQDVKRVNEEKLKRLGGD 853
            LQ IR G C D+   ++L   + +   + +D  +   RL     DV+  NE +L++L G+
Sbjct: 392  LQAIRLGRCTDDVSRKLLQTSSHK---VERD-GILATRLCTHKDDVEITNERRLQQLPGE 447

Query: 854  IVKYIAVDSGKEPWKRQLKQGIAPEELEICLGARVMLVKNKDLESGLVNGATGTVTDFVK 1033
               Y A+DS     K    Q    +++++  GA+VML KN D+  GLVNGA G VT F +
Sbjct: 448  SHLYEALDSDPMLVKTINAQCPVNQQIQLKKGAQVMLAKNLDVSRGLVNGARGVVTKFEE 507

Query: 1034 DGRVWGICERGVLPKVKFDCGVEMVVEPERWDVMEGERVFATRKQVPLILSWALSIHKCQ 1213
              +         LP V+F CGV  V++P+RW       ++ +R+Q+PL L+WA+SIHK Q
Sbjct: 508  GNKN--------LPVVRFLCGVTEVIKPDRWVFKGHGGIYLSRQQLPLKLAWAISIHKSQ 559

Query: 1214 GMTLDILHTDLSRAFGCGMVYVALSRVRSL 1303
            GM+LD +   LSR F  G  YVALSR R+L
Sbjct: 560  GMSLDCVEISLSRVFESGQAYVALSRARNL 589


>gb|AAI70996.1| PIF1 5'-to-3' DNA helicase homolog [Xenopus (Silurana) tropicalis]
          Length = 636

 Score =  281 bits (720), Expect = 3e-73
 Identities = 168/390 (43%), Positives = 233/390 (59%), Gaps = 1/390 (0%)
 Frame = +2

Query: 137  GRSVFITGSAGTGTSFLLQQAIKLLKQTHNPQEVFVTASTGVDACALNGRTLHSFAGGRL 316
            GR+VF TGSAGTG S+LL++ +  L     P+  + TASTGV AC + G TLH+FAG  +
Sbjct: 222  GRNVFFTGSAGTGKSYLLKRIVGALP----PKSTYATASTGVAACHIGGTTLHAFAG--I 275

Query: 317  GLGDSDRELLLTDVSNNRQVRKRWRVAKALVIDEVSMISGEFFDKLEYIARKIRPQSRIK 496
            G G +  E  + +++    VR+ W   K L+IDE+SM+ GEFFDKLE +AR +R +    
Sbjct: 276  GTGKASIEQCI-ELAKRPGVRQHWTGCKHLIIDEISMVEGEFFDKLEAVARAVRGKDE-- 332

Query: 497  APWGGIQLIVSGDFFQLPPVIDLSVKKEFAFEAECWNNSFDLQIELTRVFRQSDTQLIDL 676
             P+GGIQLIV GDF QLPPV   S + +F F+A  W     L +ELT V RQ+D   I L
Sbjct: 333  -PFGGIQLIVCGDFLQLPPVTQASSQTKFCFQARSWRKCIHLTMELTEVRRQTDKNFISL 391

Query: 677  LQGIRRG-CKDEKHLRILHQCNAEPGDIMKDVPVEVPRLYPRNQDVKRVNEEKLKRLGGD 853
            LQ IR G C D+   ++L   + +   + +D  +   RL     DV+  NE +L++L G+
Sbjct: 392  LQAIRLGRCTDDVSRKLLQTSSHK---VERD-GILATRLCTHKDDVEITNERRLQQLPGE 447

Query: 854  IVKYIAVDSGKEPWKRQLKQGIAPEELEICLGARVMLVKNKDLESGLVNGATGTVTDFVK 1033
               Y A+DS     K    Q    +++++  GA+VML KN D+  GLVNGA G VT F +
Sbjct: 448  SHLYEALDSDPMLVKTINAQCPVNQQIQLKKGAQVMLAKNLDVSRGLVNGARGVVTKFEE 507

Query: 1034 DGRVWGICERGVLPKVKFDCGVEMVVEPERWDVMEGERVFATRKQVPLILSWALSIHKCQ 1213
              +         LP V+F CGV  V++P+RW       ++ +R+Q+PL L+WA+SIHK Q
Sbjct: 508  GNKN--------LPVVRFLCGVTEVIKPDRWVFKGHGGIYLSRQQLPLKLAWAISIHKSQ 559

Query: 1214 GMTLDILHTDLSRAFGCGMVYVALSRVRSL 1303
            GM+LD +   LSR F  G  YVALSR R+L
Sbjct: 560  GMSLDCVEISLSRVFESGQAYVALSRARNL 589