BLASTX nr result
ID: Sinomenium21_contig00022854
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Sinomenium21_contig00022854 (309 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002319145.2| hypothetical protein POPTR_0013s05120g [Popu... 94 3e-17 ref|XP_006443354.1| hypothetical protein CICLE_v10020067mg [Citr... 87 2e-15 ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Viti... 85 9e-15 ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ... 84 3e-14 emb|CBI36673.3| unnamed protein product [Vitis vinifera] 84 3e-14 ref|XP_007030223.1| RNA-binding family protein isoform 6 [Theobr... 74 2e-11 ref|XP_007030221.1| RNA-binding family protein isoform 4 [Theobr... 74 2e-11 ref|XP_007030218.1| RNA-binding family protein isoform 1 [Theobr... 74 2e-11 ref|XP_006605188.1| PREDICTED: RNA-binding protein 40-like [Glyc... 72 6e-11 ref|XP_002325403.2| RNA recognition motif-containing family prot... 72 8e-11 ref|XP_004493140.1| PREDICTED: RNA-binding protein 40-like isofo... 72 8e-11 ref|XP_004493139.1| PREDICTED: RNA-binding protein 40-like isofo... 72 8e-11 ref|XP_002525464.1| RNA binding protein, putative [Ricinus commu... 72 8e-11 ref|XP_003624600.1| RNA-binding protein [Medicago truncatula] gi... 72 1e-10 dbj|BAH57015.1| AT1G09230 [Arabidopsis thaliana] 70 4e-10 ref|NP_172394.1| RNA-binding (RRM/RBD/RNP motifs) family protein... 70 4e-10 ref|XP_006304585.1| hypothetical protein CARUB_v10011629mg [Caps... 69 7e-10 ref|XP_002465331.1| hypothetical protein SORBIDRAFT_01g036600 [S... 69 7e-10 ref|XP_003548764.1| PREDICTED: RNA-binding protein 40-like [Glyc... 68 2e-09 ref|XP_002892494.1| RNA recognition motif-containing protein [Ar... 67 3e-09 >ref|XP_002319145.2| hypothetical protein POPTR_0013s05120g [Populus trichocarpa] gi|550325000|gb|EEE95068.2| hypothetical protein POPTR_0013s05120g [Populus trichocarpa] Length = 479 Score = 93.6 bits (231), Expect = 3e-17 Identities = 53/102 (51%), Positives = 66/102 (64%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAGKPSANTKNRDGEAQFIKDSSN 182 RLRNCAFVDF FLGKVLSVERA K + ++K + EAQ KDS Sbjct: 71 RLRNCAFVDFQSEGLAYQAHRQLNGLRFLGKVLSVERASKLNEDSKFKQSEAQQGKDSV- 129 Query: 183 LPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 LP +LMK+A T ++ +G + G LP++EPIA RLGVD+PFPP Sbjct: 130 LPTSLMKDASVTRDVIEGSNFGSLPASEPIAPRLGVDYPFPP 171 >ref|XP_006443354.1| hypothetical protein CICLE_v10020067mg [Citrus clementina] gi|567901734|ref|XP_006443355.1| hypothetical protein CICLE_v10020067mg [Citrus clementina] gi|568850729|ref|XP_006479053.1| PREDICTED: RNA-binding protein 40-like isoform X1 [Citrus sinensis] gi|557545616|gb|ESR56594.1| hypothetical protein CICLE_v10020067mg [Citrus clementina] gi|557545617|gb|ESR56595.1| hypothetical protein CICLE_v10020067mg [Citrus clementina] Length = 461 Score = 87.0 bits (214), Expect = 2e-15 Identities = 50/102 (49%), Positives = 58/102 (56%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAGKPSANTKNRDGEAQFIKDSSN 182 RLRNC FVDF FLGKVLSVERA KP+ K++ EAQ I Sbjct: 55 RLRNCVFVDFGNEPLASQAQMQLNGLRFLGKVLSVERASKPNEENKHKHFEAQSISS--- 111 Query: 183 LPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 MKEA T N +G + G +P+AEPIA RLGVD+PFPP Sbjct: 112 -----MKEAAVTRNQREGLNSGSVPAAEPIAPRLGVDYPFPP 148 >ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Vitis vinifera] gi|298205172|emb|CBI17231.3| unnamed protein product [Vitis vinifera] Length = 463 Score = 85.1 bits (209), Expect = 9e-15 Identities = 48/102 (47%), Positives = 62/102 (60%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAGKPSANTKNRDGEAQFIKDSSN 182 RLRNCAFVDF FLGKVL VERA KP+ + K + EA F KD + Sbjct: 56 RLRNCAFVDFKSEMLASQALRQLNGLRFLGKVLLVERANKPTEDDKQKS-EALFGKDLTK 114 Query: 183 LPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 P++L+K+ +L +G LP++EPIAARLG+D+PFPP Sbjct: 115 -PVSLIKDFTMARDLDEGLKSSSLPASEPIAARLGIDYPFPP 155 >ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 40-like [Vitis vinifera] Length = 463 Score = 83.6 bits (205), Expect = 3e-14 Identities = 48/102 (47%), Positives = 61/102 (59%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAGKPSANTKNRDGEAQFIKDSSN 182 RLRNCAFVDF FLGKVL VERA KP+ + K + EA F KD + Sbjct: 56 RLRNCAFVDFKSEMLASQALRQLNGLRFLGKVLLVERANKPTEDDKQKS-EALFGKDLTK 114 Query: 183 LPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 P +L+K+ +L +G LP++EPIAARLG+D+PFPP Sbjct: 115 -PASLIKDFTMARDLGEGLKSSSLPASEPIAARLGIDYPFPP 155 >emb|CBI36673.3| unnamed protein product [Vitis vinifera] Length = 190 Score = 83.6 bits (205), Expect = 3e-14 Identities = 48/102 (47%), Positives = 61/102 (59%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAGKPSANTKNRDGEAQFIKDSSN 182 RLRNCAFVDF FLGKVL VERA KP+ + K + EA F KD + Sbjct: 56 RLRNCAFVDFKSEMLASQALRQLNGLRFLGKVLLVERANKPTEDDKQKS-EALFGKDLTK 114 Query: 183 LPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 P +L+K+ +L +G LP++EPIAARLG+D+PFPP Sbjct: 115 -PASLIKDFTMARDLGEGLKSSSLPASEPIAARLGIDYPFPP 155 >ref|XP_007030223.1| RNA-binding family protein isoform 6 [Theobroma cacao] gi|508718828|gb|EOY10725.1| RNA-binding family protein isoform 6 [Theobroma cacao] Length = 436 Score = 73.9 bits (180), Expect = 2e-11 Identities = 43/102 (42%), Positives = 58/102 (56%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAGKPSANTKNRDGEAQFIKDSSN 182 +LRNCAFVDF FLGKVLSVERA K + + K + Q KD Sbjct: 72 KLRNCAFVDFKNEALASQAQRQLNGLRFLGKVLSVERASKTTEDNKPQQTGVQPGKDFPQ 131 Query: 183 LPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 +++K+A +L++G +P++EPIA RLGVD+PFPP Sbjct: 132 -SASMVKDASLARDLNQGSRLRSVPTSEPIAPRLGVDYPFPP 172 >ref|XP_007030221.1| RNA-binding family protein isoform 4 [Theobroma cacao] gi|508718826|gb|EOY10723.1| RNA-binding family protein isoform 4 [Theobroma cacao] Length = 487 Score = 73.9 bits (180), Expect = 2e-11 Identities = 43/102 (42%), Positives = 58/102 (56%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAGKPSANTKNRDGEAQFIKDSSN 182 +LRNCAFVDF FLGKVLSVERA K + + K + Q KD Sbjct: 72 KLRNCAFVDFKNEALASQAQRQLNGLRFLGKVLSVERASKTTEDNKPQQTGVQPGKDFPQ 131 Query: 183 LPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 +++K+A +L++G +P++EPIA RLGVD+PFPP Sbjct: 132 -SASMVKDASLARDLNQGSRLRSVPTSEPIAPRLGVDYPFPP 172 >ref|XP_007030218.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|590641397|ref|XP_007030219.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|590641400|ref|XP_007030220.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508718823|gb|EOY10720.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508718824|gb|EOY10721.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508718825|gb|EOY10722.1| RNA-binding family protein isoform 1 [Theobroma cacao] Length = 479 Score = 73.9 bits (180), Expect = 2e-11 Identities = 43/102 (42%), Positives = 58/102 (56%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAGKPSANTKNRDGEAQFIKDSSN 182 +LRNCAFVDF FLGKVLSVERA K + + K + Q KD Sbjct: 72 KLRNCAFVDFKNEALASQAQRQLNGLRFLGKVLSVERASKTTEDNKPQQTGVQPGKDFPQ 131 Query: 183 LPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 +++K+A +L++G +P++EPIA RLGVD+PFPP Sbjct: 132 -SASMVKDASLARDLNQGSRLRSVPTSEPIAPRLGVDYPFPP 172 >ref|XP_006605188.1| PREDICTED: RNA-binding protein 40-like [Glycine max] Length = 453 Score = 72.4 bits (176), Expect = 6e-11 Identities = 44/102 (43%), Positives = 53/102 (51%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAGKPSANTKNRDGEAQFIKDSSN 182 RLRNCAF DF FLGKVLS ERA P+ N + G+ Q KDS Sbjct: 69 RLRNCAFADFKNEIVASQAQRQLNGLRFLGKVLSAERASNPTENGEKSSGD-QLGKDSKT 127 Query: 183 LPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 +++K A T + G LP EPIA RLGV++PFPP Sbjct: 128 ---SMLKNANVTKPIDGDTKSGALPIPEPIADRLGVNYPFPP 166 >ref|XP_002325403.2| RNA recognition motif-containing family protein, partial [Populus trichocarpa] gi|550316797|gb|EEE99784.2| RNA recognition motif-containing family protein, partial [Populus trichocarpa] Length = 420 Score = 72.0 bits (175), Expect = 8e-11 Identities = 46/102 (45%), Positives = 57/102 (55%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAGKPSANTKNRDGEAQFIKDSSN 182 RL+NCAFVDF FLGKVLSVERA K S EAQ K+S Sbjct: 71 RLKNCAFVDFKSESLAYQAHTQLNGLRFLGKVLSVERASKLS--------EAQQGKESVP 122 Query: 183 LPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 P +L+++A T ++ G P++EPIA RLGVD+PFPP Sbjct: 123 -PTSLIEDASVTRDVGDGSKFRSFPASEPIAPRLGVDYPFPP 163 >ref|XP_004493140.1| PREDICTED: RNA-binding protein 40-like isoform X2 [Cicer arietinum] Length = 439 Score = 72.0 bits (175), Expect = 8e-11 Identities = 47/102 (46%), Positives = 51/102 (50%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAGKPSANTKNRDGEAQFIKDSSN 182 RLRNCAFVDF FLGKVLS ERA KP N G AQ KDS Sbjct: 61 RLRNCAFVDFKNDMLASQAHRQLNGLKFLGKVLSAERASKPIENGDKSRG-AQLGKDSKT 119 Query: 183 LPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 + +K T + G LP EPIA RLGVD+PFPP Sbjct: 120 ---SAVKNENVTKPIDGDTKSGGLPIPEPIAHRLGVDYPFPP 158 >ref|XP_004493139.1| PREDICTED: RNA-binding protein 40-like isoform X1 [Cicer arietinum] Length = 459 Score = 72.0 bits (175), Expect = 8e-11 Identities = 47/102 (46%), Positives = 51/102 (50%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAGKPSANTKNRDGEAQFIKDSSN 182 RLRNCAFVDF FLGKVLS ERA KP N G AQ KDS Sbjct: 61 RLRNCAFVDFKNDMLASQAHRQLNGLKFLGKVLSAERASKPIENGDKSRG-AQLGKDSKT 119 Query: 183 LPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 + +K T + G LP EPIA RLGVD+PFPP Sbjct: 120 ---SAVKNENVTKPIDGDTKSGGLPIPEPIAHRLGVDYPFPP 158 >ref|XP_002525464.1| RNA binding protein, putative [Ricinus communis] gi|223535277|gb|EEF36954.1| RNA binding protein, putative [Ricinus communis] Length = 450 Score = 72.0 bits (175), Expect = 8e-11 Identities = 44/104 (42%), Positives = 58/104 (55%), Gaps = 2/104 (1%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAG--KPSANTKNRDGEAQFIKDS 176 RL NCAFVDF FLGKVL+ E+A KP+ N EAQ KD Sbjct: 44 RLTNCAFVDFKNEALAYQAQRQLNGLRFLGKVLAAEKANNNKPNENNVLTQSEAQIRKDH 103 Query: 177 SNLPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 + LP ++ K+A + ++ G +P++EPIA RLGVD+PFPP Sbjct: 104 T-LPTSVDKDASAMIDTD--GRSKSVPASEPIAPRLGVDYPFPP 144 >ref|XP_003624600.1| RNA-binding protein [Medicago truncatula] gi|355499615|gb|AES80818.1| RNA-binding protein [Medicago truncatula] Length = 492 Score = 71.6 bits (174), Expect = 1e-10 Identities = 44/102 (43%), Positives = 51/102 (50%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAGKPSANTKNRDGEAQFIKDSSN 182 RLRNCAFVDF FLGKVLS ERAGKP+ N G AQ KDS Sbjct: 61 RLRNCAFVDFKNDMLASQAQRQLNGLKFLGKVLSAERAGKPNENVGKSSG-AQLGKDSKT 119 Query: 183 LPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 + ++ + G P EPIA R+GVD+PFPP Sbjct: 120 ---SAVRSEDVIKPIDGEAKSGGFPIPEPIAHRIGVDYPFPP 158 >dbj|BAH57015.1| AT1G09230 [Arabidopsis thaliana] Length = 375 Score = 69.7 bits (169), Expect = 4e-10 Identities = 41/102 (40%), Positives = 53/102 (51%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAGKPSANTKNRDGEAQFIKDSSN 182 +LRN AFVDF FLGKVL V+RA KP+ N K+R E K + Sbjct: 63 KLRNAAFVDFKNEAFASQAHRQLNGLRFLGKVLQVQRANKPNDNKKSRQIEESVTKGN-- 120 Query: 183 LPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 A STV+ + G++ S EPIA +LG+D+PFPP Sbjct: 121 --------AFSTVSTNNDSKSGQILSGEPIAPKLGIDYPFPP 154 >ref|NP_172394.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana] gi|20258828|gb|AAM13896.1| unknown protein [Arabidopsis thaliana] gi|21689717|gb|AAM67480.1| unknown protein [Arabidopsis thaliana] gi|332190295|gb|AEE28416.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana] Length = 442 Score = 69.7 bits (169), Expect = 4e-10 Identities = 41/102 (40%), Positives = 53/102 (51%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAGKPSANTKNRDGEAQFIKDSSN 182 +LRN AFVDF FLGKVL V+RA KP+ N K+R E K + Sbjct: 63 KLRNAAFVDFKNEAFASQAHRQLNGLRFLGKVLQVQRANKPNDNKKSRQIEESVTKGN-- 120 Query: 183 LPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 A STV+ + G++ S EPIA +LG+D+PFPP Sbjct: 121 --------AFSTVSTNNDSKSGQILSGEPIAPKLGIDYPFPP 154 >ref|XP_006304585.1| hypothetical protein CARUB_v10011629mg [Capsella rubella] gi|482573296|gb|EOA37483.1| hypothetical protein CARUB_v10011629mg [Capsella rubella] Length = 425 Score = 68.9 bits (167), Expect = 7e-10 Identities = 41/102 (40%), Positives = 53/102 (51%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAGKPSANTKNRDGEAQFIKDSSN 182 +LRN AFVDF FLGKVL V+RA KP+ N K+R E IK + Sbjct: 63 KLRNAAFVDFKNEAFASQAHRQLNGLRFLGKVLQVQRANKPNENKKSRQIEESMIKGN-- 120 Query: 183 LPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 A STV + P ++ S EPIA +LG+++PFPP Sbjct: 121 --------AFSTVVANSDSKPEQMLSGEPIAPKLGINYPFPP 154 >ref|XP_002465331.1| hypothetical protein SORBIDRAFT_01g036600 [Sorghum bicolor] gi|241919185|gb|EER92329.1| hypothetical protein SORBIDRAFT_01g036600 [Sorghum bicolor] Length = 467 Score = 68.9 bits (167), Expect = 7e-10 Identities = 39/102 (38%), Positives = 52/102 (50%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAGKPSANTKNRDGEAQFIKDSSN 182 +LRNCAFVDF FLGKVL+VERA +P+AN + + Q + S Sbjct: 78 KLRNCAFVDFRDEAAANHAHSLLNRLRFLGKVLTVERANRPNANDSHLKHQDQLVHGVSQ 137 Query: 183 LPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 +P ++S +AEPIA +LGVD+PFPP Sbjct: 138 VP-----------SISSQNQKDHTSTAEPIAPKLGVDYPFPP 168 >ref|XP_003548764.1| PREDICTED: RNA-binding protein 40-like [Glycine max] Length = 456 Score = 67.8 bits (164), Expect = 2e-09 Identities = 42/102 (41%), Positives = 51/102 (50%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAGKPSANTKNRDGEAQFIKDSSN 182 RLRNCAF DF FLGKVLS ERA P+ N + G+ Q KD Sbjct: 59 RLRNCAFADFKNEIVASQAQRQLNGLRFLGKVLSAERASNPTENGEKSSGD-QLGKDPKT 117 Query: 183 LPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 +++ A T + G LP EPIA RLGV++PFPP Sbjct: 118 ---SMLMNANVTKPIDGDTKSGGLPIPEPIADRLGVNYPFPP 156 >ref|XP_002892494.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297338336|gb|EFH68753.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 438 Score = 66.6 bits (161), Expect = 3e-09 Identities = 39/102 (38%), Positives = 52/102 (50%) Frame = +3 Query: 3 RLRNCAFVDFXXXXXXXXXXXXXXXXXFLGKVLSVERAGKPSANTKNRDGEAQFIKDSSN 182 +LRN AFVDF FLGKVL V+RA KP+ N K+R E K + Sbjct: 63 KLRNAAFVDFKNEAFASQAHRQLNGLRFLGKVLQVQRANKPNENKKSRQIEESVTKGNPF 122 Query: 183 LPITLMKEAPSTVNLSKGGDPGKLPSAEPIAARLGVDHPFPP 308 STV+ + G++ S EPIA +LG+++PFPP Sbjct: 123 ----------STVSTNNDSKSGQMLSGEPIAPKLGINYPFPP 154