BLASTX nr result
ID: Sinomenium21_contig00022764
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00022764
(1086 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts... 92 3e-16
ref|XP_006858514.1| hypothetical protein AMTR_s00071p00142490 [A... 91 8e-16
ref|XP_007039605.1| Regulator of nonsense transcripts 1 [Theobro... 87 9e-15
ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putati... 87 2e-14
ref|XP_006368472.1| RNA helicase family protein [Populus trichoc... 86 2e-14
gb|ABK96558.1| unknown [Populus trichocarpa x Populus deltoides] 86 2e-14
ref|XP_006385597.1| RNA helicase family protein [Populus trichoc... 84 8e-14
ref|XP_007210428.1| hypothetical protein PRUPE_ppa000334mg [Prun... 82 3e-13
ref|XP_004300289.1| PREDICTED: regulator of nonsense transcripts... 82 5e-13
ref|XP_006358610.1| PREDICTED: regulator of nonsense transcripts... 79 3e-12
ref|XP_004245855.1| PREDICTED: regulator of nonsense transcripts... 79 3e-12
ref|XP_006658577.1| PREDICTED: regulator of nonsense transcripts... 79 3e-12
ref|XP_006485359.1| PREDICTED: regulator of nonsense transcripts... 79 3e-12
ref|XP_006436834.1| hypothetical protein CICLE_v10031552mg [Citr... 79 3e-12
ref|XP_006362492.1| PREDICTED: regulator of nonsense transcripts... 79 4e-12
gb|EXC26734.1| Regulator of nonsense transcripts 1-like protein ... 77 1e-11
ref|XP_004244550.1| PREDICTED: regulator of nonsense transcripts... 76 2e-11
ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts... 76 3e-11
ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of... 76 3e-11
ref|XP_007156615.1| hypothetical protein PHAVU_002G003300g [Phas... 75 4e-11
>ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis
vinifera] gi|297742168|emb|CBI33955.3| unnamed protein
product [Vitis vinifera]
Length = 1267
Score = 92.4 bits (228), Expect = 3e-16
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNT 946
LFTQVGFNDPSQDD+SQ+ FGV PNPLQSQGLMNPLYSQPF HYNT
Sbjct: 1186 LFTQVGFNDPSQDDASQSHFGVANPNPLQSQGLMNPLYSQPFAHYNT 1232
>ref|XP_006858514.1| hypothetical protein AMTR_s00071p00142490 [Amborella trichopoda]
gi|548862623|gb|ERN19981.1| hypothetical protein
AMTR_s00071p00142490 [Amborella trichopoda]
Length = 1252
Score = 90.9 bits (224), Expect = 8e-16
Identities = 47/76 (61%), Positives = 49/76 (64%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNTXXXXXXXXXXXXX 907
LFTQVGFNDPSQDDSSQ FG+ GP PLQSQG+MNPLYSQPFT YNT
Sbjct: 1182 LFTQVGFNDPSQDDSSQTHFGMAGPGPLQSQGVMNPLYSQPFTQYNT-----QPLNMQAP 1236
Query: 906 XXXXXXXXNHKLHYNG 859
N KLHYNG
Sbjct: 1237 QQQNQSTQNQKLHYNG 1252
>ref|XP_007039605.1| Regulator of nonsense transcripts 1 [Theobroma cacao]
gi|508776850|gb|EOY24106.1| Regulator of nonsense
transcripts 1 [Theobroma cacao]
Length = 1266
Score = 87.4 bits (215), Expect = 9e-15
Identities = 46/76 (60%), Positives = 48/76 (63%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNTXXXXXXXXXXXXX 907
LFTQVGFNDPSQDD+SQ+ FGV PN LQSQGLMN LYSQPF HYNT
Sbjct: 1192 LFTQVGFNDPSQDDASQSHFGVANPNQLQSQGLMNSLYSQPFAHYNT-QPLNLQAPQQQQ 1250
Query: 906 XXXXXXXXNHKLHYNG 859
N KLHYNG
Sbjct: 1251 PQQGQGSQNQKLHYNG 1266
>ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay
protein, putative [Ricinus communis]
Length = 1280
Score = 86.7 bits (213), Expect = 2e-14
Identities = 44/76 (57%), Positives = 47/76 (61%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNTXXXXXXXXXXXXX 907
LFTQ+GFND SQDD SQN FG+ PNPLQSQGLMN LYSQPF HYNT
Sbjct: 1208 LFTQIGFNDASQDDVSQNHFGIANPNPLQSQGLMNSLYSQPFAHYNT---QPLNMQSTQQ 1264
Query: 906 XXXXXXXXNHKLHYNG 859
N K+HYNG
Sbjct: 1265 PQQGQGSQNQKIHYNG 1280
>ref|XP_006368472.1| RNA helicase family protein [Populus trichocarpa]
gi|550346386|gb|ERP65041.1| RNA helicase family protein
[Populus trichocarpa]
Length = 1256
Score = 86.3 bits (212), Expect = 2e-14
Identities = 44/76 (57%), Positives = 48/76 (63%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNTXXXXXXXXXXXXX 907
LFTQVGFNDPSQDD+SQ+ FG+ PN LQSQGLMN LYSQPF HYNT
Sbjct: 1183 LFTQVGFNDPSQDDASQSHFGIANPNQLQSQGLMNSLYSQPFAHYNT--QPVNLQAPQQQ 1240
Query: 906 XXXXXXXXNHKLHYNG 859
N K+HYNG
Sbjct: 1241 SQQGQGTQNQKIHYNG 1256
>gb|ABK96558.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 582
Score = 86.3 bits (212), Expect = 2e-14
Identities = 44/76 (57%), Positives = 48/76 (63%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNTXXXXXXXXXXXXX 907
LFTQVGFNDPSQDD+SQ+ FG+ PN LQSQGLMN LYSQPF HYNT
Sbjct: 509 LFTQVGFNDPSQDDASQSHFGITNPNQLQSQGLMNSLYSQPFAHYNT--QPVNLQAPQQQ 566
Query: 906 XXXXXXXXNHKLHYNG 859
N K+HYNG
Sbjct: 567 SQQGQGTQNQKIHYNG 582
>ref|XP_006385597.1| RNA helicase family protein [Populus trichocarpa]
gi|550342726|gb|ERP63394.1| RNA helicase family protein
[Populus trichocarpa]
Length = 1242
Score = 84.3 bits (207), Expect = 8e-14
Identities = 43/76 (56%), Positives = 48/76 (63%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNTXXXXXXXXXXXXX 907
LFTQVG+NDPSQDD+SQ+ FG+ PN LQSQGLMN LYSQPF HYNT
Sbjct: 1169 LFTQVGYNDPSQDDASQSHFGIANPNQLQSQGLMNSLYSQPFGHYNT--QQLNLQAPQQQ 1226
Query: 906 XXXXXXXXNHKLHYNG 859
N K+HYNG
Sbjct: 1227 PQQGQGTQNQKIHYNG 1242
>ref|XP_007210428.1| hypothetical protein PRUPE_ppa000334mg [Prunus persica]
gi|462406163|gb|EMJ11627.1| hypothetical protein
PRUPE_ppa000334mg [Prunus persica]
Length = 1276
Score = 82.4 bits (202), Expect = 3e-13
Identities = 37/47 (78%), Positives = 39/47 (82%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNT 946
LFTQVGFNDPSQDD+SQN +GV N LQSQG MN LYSQPF HYNT
Sbjct: 1198 LFTQVGFNDPSQDDASQNHYGVANANQLQSQGFMNSLYSQPFAHYNT 1244
>ref|XP_004300289.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Fragaria
vesca subsp. vesca]
Length = 1277
Score = 81.6 bits (200), Expect = 5e-13
Identities = 43/76 (56%), Positives = 46/76 (60%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNTXXXXXXXXXXXXX 907
LFTQVG+NDPSQDD SQN +GV N LQSQG MN LYSQPFTHYNT
Sbjct: 1203 LFTQVGYNDPSQDDGSQNHYGVGNANALQSQGYMNSLYSQPFTHYNT-QPMNLQAPQQQP 1261
Query: 906 XXXXXXXXNHKLHYNG 859
N K+HYNG
Sbjct: 1262 PQQGQSSQNQKIHYNG 1277
>ref|XP_006358610.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Solanum
tuberosum]
Length = 1267
Score = 79.3 bits (194), Expect = 3e-12
Identities = 41/76 (53%), Positives = 46/76 (60%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNTXXXXXXXXXXXXX 907
LFTQ G++DPSQ+DS QN FG+ NPLQSQ L+NPLYSQPF HYNT
Sbjct: 1196 LFTQAGYSDPSQEDSPQNHFGMSNANPLQSQSLLNPLYSQPFGHYNT----QPLNMQSSQ 1251
Query: 906 XXXXXXXXNHKLHYNG 859
N KLHYNG
Sbjct: 1252 PQQPQGSQNQKLHYNG 1267
>ref|XP_004245855.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Solanum
lycopersicum]
Length = 1274
Score = 79.3 bits (194), Expect = 3e-12
Identities = 40/77 (51%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNTXXXXXXXXXXXXX 907
LFTQ G++DPSQ+DSSQN FG+ NPL SQ L+NPLYSQPF HYNT
Sbjct: 1198 LFTQAGYSDPSQEDSSQNHFGMSNANPLHSQSLLNPLYSQPFGHYNTQPLNMQSSQPQQP 1257
Query: 906 XXXXXXXXNH-KLHYNG 859
+ KLHYNG
Sbjct: 1258 QAPQVQGSQNQKLHYNG 1274
>ref|XP_006658577.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Oryza
brachyantha]
Length = 1174
Score = 79.0 bits (193), Expect = 3e-12
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNT 946
+FTQ G+NDPSQD+SSQ FG+ GP PLQSQ +MNPLYSQ + HYNT
Sbjct: 1118 MFTQAGYNDPSQDESSQMHFGMAGPGPLQSQAMMNPLYSQSYAHYNT 1164
>ref|XP_006485359.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Citrus
sinensis]
Length = 1274
Score = 79.0 bits (193), Expect = 3e-12
Identities = 33/47 (70%), Positives = 41/47 (87%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNT 946
LFTQ G+N+P+QDD+SQ+ FGVV PN LQ+QG+MN LYSQPF HYN+
Sbjct: 1201 LFTQAGYNEPTQDDASQSHFGVVNPNALQTQGMMNSLYSQPFAHYNS 1247
>ref|XP_006436834.1| hypothetical protein CICLE_v10031552mg [Citrus clementina]
gi|557539030|gb|ESR50074.1| hypothetical protein
CICLE_v10031552mg [Citrus clementina]
Length = 440
Score = 79.0 bits (193), Expect = 3e-12
Identities = 33/47 (70%), Positives = 41/47 (87%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNT 946
LFTQ G+N+P+QDD+SQ+ FGVV PN LQ+QG+MN LYSQPF HYN+
Sbjct: 367 LFTQAGYNEPTQDDASQSHFGVVNPNALQTQGMMNSLYSQPFAHYNS 413
>ref|XP_006362492.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Solanum
tuberosum]
Length = 1264
Score = 78.6 bits (192), Expect = 4e-12
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNT 946
LFTQ G+NDPSQDD SQN FG+ N LQSQ L+NP+YSQPF HYNT
Sbjct: 1188 LFTQAGYNDPSQDDGSQNHFGMSNVNSLQSQSLLNPIYSQPFAHYNT 1234
>gb|EXC26734.1| Regulator of nonsense transcripts 1-like protein [Morus notabilis]
Length = 1267
Score = 77.0 bits (188), Expect = 1e-11
Identities = 41/76 (53%), Positives = 45/76 (59%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNTXXXXXXXXXXXXX 907
LFTQV NDPSQDD+SQ+ +GV N LQSQG MN LYSQPFTHYNT
Sbjct: 1194 LFTQVCMNDPSQDDASQSHYGVANANQLQSQGFMNSLYSQPFTHYNT--QPMNLQAPQQQ 1251
Query: 906 XXXXXXXXNHKLHYNG 859
N K+HYNG
Sbjct: 1252 PQQSQSSQNQKIHYNG 1267
>ref|XP_004244550.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Solanum
lycopersicum]
Length = 1264
Score = 76.3 bits (186), Expect = 2e-11
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNT 946
LFTQ G+NDP QDD SQN FG+ N LQSQ L+NP+YSQPF HYNT
Sbjct: 1188 LFTQAGYNDPLQDDGSQNHFGMSNVNSLQSQSLLNPIYSQPFAHYNT 1234
>ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis
sativus]
Length = 1268
Score = 75.9 bits (185), Expect = 3e-11
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNT 946
LFTQVGF+DPS D++SQ+ + V NPLQSQG+MN LYSQPF HYNT
Sbjct: 1194 LFTQVGFSDPSLDEASQSHYNVTNANPLQSQGMMNSLYSQPFAHYNT 1240
>ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
homolog [Cucumis sativus]
Length = 1246
Score = 75.9 bits (185), Expect = 3e-11
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNT 946
LFTQVGF+DPS D++SQ+ + V NPLQSQG+MN LYSQPF HYNT
Sbjct: 1172 LFTQVGFSDPSLDEASQSHYNVTNANPLQSQGMMNSLYSQPFAHYNT 1218
>ref|XP_007156615.1| hypothetical protein PHAVU_002G003300g [Phaseolus vulgaris]
gi|561030030|gb|ESW28609.1| hypothetical protein
PHAVU_002G003300g [Phaseolus vulgaris]
Length = 1268
Score = 75.5 bits (184), Expect = 4e-11
Identities = 42/76 (55%), Positives = 45/76 (59%)
Frame = -1
Query: 1086 LFTQVGFNDPSQDDSSQNQFGVVGPNPLQSQGLMNPLYSQPFTHYNTXXXXXXXXXXXXX 907
LFTQVGFNDP QDDS+Q+ FGV NPLQSQ MN LYSQPF HYNT
Sbjct: 1198 LFTQVGFNDPLQDDSTQSHFGVANANPLQSQ--MNSLYSQPFAHYNT---QPLNMQASQQ 1252
Query: 906 XXXXXXXXNHKLHYNG 859
N K+HYNG
Sbjct: 1253 QSQTQNSQNQKIHYNG 1268