BLASTX nr result
ID: Sinomenium21_contig00022715
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00022715
(270 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI40586.3| unnamed protein product [Vitis vinifera] 96 5e-18
ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III s... 96 5e-18
ref|XP_003552163.1| PREDICTED: DNA-directed RNA polymerase III s... 95 1e-17
ref|XP_006647672.1| PREDICTED: DNA-directed RNA polymerase III s... 94 2e-17
ref|XP_007140305.1| hypothetical protein PHAVU_008G101000g [Phas... 90 4e-16
ref|XP_007051490.1| DNA-directed RNA polymerase subunit [Theobro... 90 4e-16
ref|XP_004141147.1| PREDICTED: DNA-directed RNA polymerase III s... 90 4e-16
ref|NP_001047708.1| Os02g0672700 [Oryza sativa Japonica Group] g... 89 5e-16
ref|NP_001238101.1| uncharacterized protein LOC100527062 [Glycin... 89 8e-16
ref|XP_004953422.1| PREDICTED: DNA-directed RNA polymerase III s... 87 3e-15
ref|XP_002318427.1| hypothetical protein POPTR_0012s02290g [Popu... 86 5e-15
ref|XP_004158339.1| PREDICTED: DNA-directed RNA polymerase III s... 85 9e-15
ref|XP_002454492.1| hypothetical protein SORBIDRAFT_04g032090 [S... 85 9e-15
gb|EXB83864.1| DNA-directed RNA polymerase subunit M [Morus nota... 85 1e-14
ref|XP_002523512.1| DNA-directed RNA polymerase III, putative [R... 84 2e-14
ref|XP_004239689.1| PREDICTED: DNA-directed RNA polymerase III s... 83 5e-14
gb|AFK43219.1| unknown [Lotus japonicus] 83 5e-14
ref|XP_006444795.1| hypothetical protein CICLE_v10022957mg [Citr... 82 8e-14
gb|EAY87036.1| hypothetical protein OsI_08435 [Oryza sativa Indi... 82 8e-14
ref|XP_006345812.1| PREDICTED: DNA-directed RNA polymerase III s... 82 1e-13
>emb|CBI40586.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 95.9 bits (237), Expect = 5e-18
Identities = 43/68 (63%), Positives = 52/68 (76%)
Frame = -3
Query: 208 MEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQIKIKKRQRLAKKSVDPIFSGED 29
MEFCP+CGN LQYE + GR AR FCPTCPYV IE ++KIK++QRL KK ++PIFS +D
Sbjct: 65 MEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEPIFSKDD 124
Query: 28 AMKFAPKT 5
MK P T
Sbjct: 125 -MKNGPTT 131
>ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
[Vitis vinifera]
Length = 111
Score = 95.9 bits (237), Expect = 5e-18
Identities = 43/68 (63%), Positives = 52/68 (76%)
Frame = -3
Query: 208 MEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQIKIKKRQRLAKKSVDPIFSGED 29
MEFCP+CGN LQYE + GR AR FCPTCPYV IE ++KIK++QRL KK ++PIFS +D
Sbjct: 1 MEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEPIFSKDD 60
Query: 28 AMKFAPKT 5
MK P T
Sbjct: 61 -MKNGPTT 67
>ref|XP_003552163.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
isoform X1 [Glycine max]
gi|571546939|ref|XP_006602584.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC10-like isoform X2
[Glycine max]
Length = 111
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/69 (60%), Positives = 53/69 (76%)
Frame = -3
Query: 208 MEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQIKIKKRQRLAKKSVDPIFSGED 29
MEFCPSCGN+LQYE Y GR +R FC CPYV IEN+++IK++QRL +K ++PIFS ED
Sbjct: 1 MEFCPSCGNMLQYELPYMGRPSRFFCSACPYVCHIENRVEIKRKQRLVRKEIEPIFS-ED 59
Query: 28 AMKFAPKTQ 2
M AP T+
Sbjct: 60 DMTNAPSTE 68
>ref|XP_006647672.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
[Oryza brachyantha]
Length = 110
Score = 94.0 bits (232), Expect = 2e-17
Identities = 43/68 (63%), Positives = 51/68 (75%)
Frame = -3
Query: 208 MEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQIKIKKRQRLAKKSVDPIFSGED 29
M+FCP+CG LLQ +PA G + R FCPTCPYV + N KI K+ RL KK V+PIFSG+D
Sbjct: 1 MDFCPACGMLLQIQPATGGNRMRFFCPTCPYVCPVRN--KIVKKARLVKKEVEPIFSGDD 58
Query: 28 AMKFAPKT 5
AMK APKT
Sbjct: 59 AMKLAPKT 66
>ref|XP_007140305.1| hypothetical protein PHAVU_008G101000g [Phaseolus vulgaris]
gi|561013438|gb|ESW12299.1| hypothetical protein
PHAVU_008G101000g [Phaseolus vulgaris]
Length = 111
Score = 89.7 bits (221), Expect = 4e-16
Identities = 41/69 (59%), Positives = 51/69 (73%)
Frame = -3
Query: 208 MEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQIKIKKRQRLAKKSVDPIFSGED 29
MEFCP+CGN+L YE Y R AR FC CPYV I N++KIK++QRL KK ++PI S +D
Sbjct: 1 MEFCPTCGNMLLYELPYLDRPARFFCFACPYVCNIHNRVKIKRKQRLVKKEIEPIISPDD 60
Query: 28 AMKFAPKTQ 2
MK APKT+
Sbjct: 61 -MKNAPKTE 68
>ref|XP_007051490.1| DNA-directed RNA polymerase subunit [Theobroma cacao]
gi|508703751|gb|EOX95647.1| DNA-directed RNA polymerase
subunit [Theobroma cacao]
Length = 112
Score = 89.7 bits (221), Expect = 4e-16
Identities = 34/60 (56%), Positives = 49/60 (81%)
Frame = -3
Query: 208 MEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQIKIKKRQRLAKKSVDPIFSGED 29
MEFCP+CGN+LQ+E + GR +R CPTCPYV ++EN++KIK+RQ L KK ++P+F+ +D
Sbjct: 1 MEFCPTCGNMLQFELPHMGRPSRFVCPTCPYVCQLENKVKIKRRQHLVKKEIEPVFNSDD 60
>ref|XP_004141147.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
[Cucumis sativus]
Length = 111
Score = 89.7 bits (221), Expect = 4e-16
Identities = 39/69 (56%), Positives = 54/69 (78%)
Frame = -3
Query: 208 MEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQIKIKKRQRLAKKSVDPIFSGED 29
MEFCP+CGN+LQ+E G+ +R FCPTCPYVS +EN++KIK++Q L KK ++PI S +D
Sbjct: 1 MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 60
Query: 28 AMKFAPKTQ 2
MK A +T+
Sbjct: 61 -MKNAAQTE 68
>ref|NP_001047708.1| Os02g0672700 [Oryza sativa Japonica Group]
gi|50251233|dbj|BAD27819.1| putative DNA-directed RNA
polymerase III [Oryza sativa Japonica Group]
gi|50251924|dbj|BAD27861.1| putative DNA-directed RNA
polymerase II [Oryza sativa Japonica Group]
gi|113537239|dbj|BAF09622.1| Os02g0672700 [Oryza sativa
Japonica Group] gi|215708708|dbj|BAG93977.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215765354|dbj|BAG87051.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 110
Score = 89.4 bits (220), Expect = 5e-16
Identities = 42/68 (61%), Positives = 49/68 (72%)
Frame = -3
Query: 208 MEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQIKIKKRQRLAKKSVDPIFSGED 29
MEFCP CG LLQ +PA G + R +CPTCPYV ++N KI K+ RL KK V+PIFS D
Sbjct: 1 MEFCPGCGMLLQIQPATGGNRLRFYCPTCPYVCPVKN--KIVKKARLVKKEVEPIFSDSD 58
Query: 28 AMKFAPKT 5
AMK APKT
Sbjct: 59 AMKNAPKT 66
>ref|NP_001238101.1| uncharacterized protein LOC100527062 [Glycine max]
gi|255631470|gb|ACU16102.1| unknown [Glycine max]
Length = 111
Score = 88.6 bits (218), Expect = 8e-16
Identities = 40/69 (57%), Positives = 51/69 (73%)
Frame = -3
Query: 208 MEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQIKIKKRQRLAKKSVDPIFSGED 29
MEFCP+CGN+LQYE Y GR +R FC CPYV IEN+++IK++QRL K ++PIFS ED
Sbjct: 1 MEFCPTCGNMLQYELPYMGRPSRFFCSACPYVCLIENRVEIKRKQRLVSKEIEPIFS-ED 59
Query: 28 AMKFAPKTQ 2
M A T+
Sbjct: 60 DMTNAASTE 68
>ref|XP_004953422.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
[Setaria italica]
Length = 110
Score = 86.7 bits (213), Expect = 3e-15
Identities = 41/68 (60%), Positives = 48/68 (70%)
Frame = -3
Query: 208 MEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQIKIKKRQRLAKKSVDPIFSGED 29
MEFCPSCG LLQ +P + RLFCP CPYV I+N KI ++ +L KK V+PIFS D
Sbjct: 1 MEFCPSCGLLLQIDPGTGSHRLRLFCPLCPYVCAIQN--KIVRKAKLVKKEVEPIFSNAD 58
Query: 28 AMKFAPKT 5
AMK APKT
Sbjct: 59 AMKLAPKT 66
>ref|XP_002318427.1| hypothetical protein POPTR_0012s02290g [Populus trichocarpa]
gi|566196382|ref|XP_006376652.1| DNA-directed RNA
polymerase 3 family protein [Populus trichocarpa]
gi|566196384|ref|XP_006376653.1| hypothetical protein
POPTR_0012s02290g [Populus trichocarpa]
gi|222859100|gb|EEE96647.1| hypothetical protein
POPTR_0012s02290g [Populus trichocarpa]
gi|550326208|gb|ERP54449.1| DNA-directed RNA polymerase
3 family protein [Populus trichocarpa]
gi|550326209|gb|ERP54450.1| hypothetical protein
POPTR_0012s02290g [Populus trichocarpa]
Length = 112
Score = 85.9 bits (211), Expect = 5e-15
Identities = 35/60 (58%), Positives = 49/60 (81%)
Frame = -3
Query: 208 MEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQIKIKKRQRLAKKSVDPIFSGED 29
MEFCP+CG LL+YE G+ AR +CPTCPY + IE+++KIK++Q+LAKK ++PIF+ ED
Sbjct: 1 MEFCPTCGMLLRYETPNMGQAARFYCPTCPYFASIESRVKIKRKQKLAKKEIEPIFTLED 60
>ref|XP_004158339.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
[Cucumis sativus]
Length = 112
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/70 (55%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = -3
Query: 208 MEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQI-KIKKRQRLAKKSVDPIFSGE 32
MEFCP+CGN+LQ+E G+ +R FCPTCPYVS +EN++ KIK++Q L KK ++PI S +
Sbjct: 1 MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVCKIKRKQHLVKKELEPIISDD 60
Query: 31 DAMKFAPKTQ 2
D MK A +T+
Sbjct: 61 D-MKNAAQTE 69
>ref|XP_002454492.1| hypothetical protein SORBIDRAFT_04g032090 [Sorghum bicolor]
gi|241934323|gb|EES07468.1| hypothetical protein
SORBIDRAFT_04g032090 [Sorghum bicolor]
Length = 166
Score = 85.1 bits (209), Expect = 9e-15
Identities = 42/70 (60%), Positives = 47/70 (67%)
Frame = -3
Query: 214 RAMEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQIKIKKRQRLAKKSVDPIFSG 35
RAMEFCP CG LLQ +P + RLFC CPYV I+N KI K+ RL KK V+PIFS
Sbjct: 55 RAMEFCPVCGMLLQIDPGTASHRLRLFCSVCPYVCPIQN--KIVKKARLVKKEVEPIFST 112
Query: 34 EDAMKFAPKT 5
D MK APKT
Sbjct: 113 ADEMKSAPKT 122
>gb|EXB83864.1| DNA-directed RNA polymerase subunit M [Morus notabilis]
Length = 110
Score = 84.7 bits (208), Expect = 1e-14
Identities = 37/68 (54%), Positives = 49/68 (72%)
Frame = -3
Query: 208 MEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQIKIKKRQRLAKKSVDPIFSGED 29
MEFCP+CG +L YE GR AR +CPTCPYV +E+++KIK+RQ L KK ++P+FS D
Sbjct: 1 MEFCPTCGVMLLYELPDRGRSARFYCPTCPYVCSLESRVKIKRRQHLVKKEIEPVFSQND 60
Query: 28 AMKFAPKT 5
K P+T
Sbjct: 61 LTK-GPQT 67
>ref|XP_002523512.1| DNA-directed RNA polymerase III, putative [Ricinus communis]
gi|223537219|gb|EEF38851.1| DNA-directed RNA polymerase
III, putative [Ricinus communis]
Length = 112
Score = 84.3 bits (207), Expect = 2e-14
Identities = 35/69 (50%), Positives = 52/69 (75%)
Frame = -3
Query: 208 MEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQIKIKKRQRLAKKSVDPIFSGED 29
MEFCP+CG LL+YE G+ AR +C TCPYV IE+++KIK++Q+L KK ++P+F+ +D
Sbjct: 1 MEFCPTCGVLLRYELPNMGQSARFYCSTCPYVCSIESRVKIKRKQQLIKKEIEPVFTLDD 60
Query: 28 AMKFAPKTQ 2
MK +T+
Sbjct: 61 MMKGGSETE 69
>ref|XP_004239689.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
isoform 1 [Solanum lycopersicum]
Length = 111
Score = 82.8 bits (203), Expect = 5e-14
Identities = 36/60 (60%), Positives = 43/60 (71%)
Frame = -3
Query: 208 MEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQIKIKKRQRLAKKSVDPIFSGED 29
ME CP CG LLQYE + R AR FCP CPYV +EN+IK+K+RQ L KK +DP+ S ED
Sbjct: 1 MEVCPDCGMLLQYELPHMDRPARFFCPACPYVCNLENRIKMKRRQPLVKKQMDPVISTED 60
>gb|AFK43219.1| unknown [Lotus japonicus]
Length = 111
Score = 82.8 bits (203), Expect = 5e-14
Identities = 37/69 (53%), Positives = 49/69 (71%)
Frame = -3
Query: 208 MEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQIKIKKRQRLAKKSVDPIFSGED 29
MEFCPSC N+L++E G +RLFC TCPYV IE +KIK++QRL +K +DP+ S +D
Sbjct: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
Query: 28 AMKFAPKTQ 2
MK P T+
Sbjct: 61 -MKNGPTTE 68
>ref|XP_006444795.1| hypothetical protein CICLE_v10022957mg [Citrus clementina]
gi|557547057|gb|ESR58035.1| hypothetical protein
CICLE_v10022957mg [Citrus clementina]
Length = 110
Score = 82.0 bits (201), Expect = 8e-14
Identities = 35/69 (50%), Positives = 51/69 (73%)
Frame = -3
Query: 208 MEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQIKIKKRQRLAKKSVDPIFSGED 29
MEFCP+CG +LQYE + R +R CP CPYV +E+++KIK++Q L+KK + PIF+ +D
Sbjct: 1 MEFCPTCGTMLQYELPHMDRPSRFSCPACPYVCNMESRVKIKRKQPLSKKEIQPIFT-QD 59
Query: 28 AMKFAPKTQ 2
AM P+T+
Sbjct: 60 AMMEGPQTE 68
>gb|EAY87036.1| hypothetical protein OsI_08435 [Oryza sativa Indica Group]
gi|222623425|gb|EEE57557.1| hypothetical protein
OsJ_07898 [Oryza sativa Japonica Group]
Length = 106
Score = 82.0 bits (201), Expect = 8e-14
Identities = 40/68 (58%), Positives = 45/68 (66%)
Frame = -3
Query: 208 MEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQIKIKKRQRLAKKSVDPIFSGED 29
MEFCP CG LLQ +PA G + R +CPTCPYV I K+ RL KK V+PIFS D
Sbjct: 1 MEFCPGCGMLLQIQPATGGNRLRFYCPTCPYV------CPIVKKARLVKKEVEPIFSDSD 54
Query: 28 AMKFAPKT 5
AMK APKT
Sbjct: 55 AMKNAPKT 62
>ref|XP_006345812.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
[Solanum tuberosum]
Length = 111
Score = 81.6 bits (200), Expect = 1e-13
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = -3
Query: 208 MEFCPSCGNLLQYEPAYTGRKARLFCPTCPYVSEIENQIKIKKRQRLAKKSVDPIFSGED 29
ME CP CG LLQYE + R AR FCP CP+V +EN++K+KKRQ L KK +DP+ S ED
Sbjct: 1 MEVCPDCGMLLQYELPHMDRPARFFCPACPFVCNLENRLKMKKRQPLVKKQMDPVISTED 60