BLASTX nr result

ID: Sinomenium21_contig00022510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00022510
         (271 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001077989.1| poly(ADP-ribose) glycohydrolase 1 [Arabidops...    57   2e-06
dbj|BAD95273.1| poly(ADP-ribose) like glycohydrolase [Arabidopsi...    57   2e-06
ref|NP_565730.1| poly(ADP-ribose) glycohydrolase 1 [Arabidopsis ...    57   2e-06
ref|XP_002881202.1| hypothetical protein ARALYDRAFT_482111 [Arab...    57   3e-06
ref|XP_006293957.1| hypothetical protein CARUB_v10022947mg [Caps...    56   6e-06

>ref|NP_001077989.1| poly(ADP-ribose) glycohydrolase 1 [Arabidopsis thaliana]
           gi|330253504|gb|AEC08598.1| poly(ADP-ribose)
           glycohydrolase 1 [Arabidopsis thaliana]
          Length = 547

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = -1

Query: 271 QATKCILSRRWTV*ELWNMLG**KYSSQILKGETHDNFFSWLLPSFAVSSTAILDP 104
           Q TK ILS +WTV +LWNM+   +YS+Q L  +T   FFSWLLPS A ++ AI  P
Sbjct: 494 QVTKWILSHKWTVGDLWNMML--EYSAQRLYKQTSVGFFSWLLPSLATTNKAIQPP 547


>dbj|BAD95273.1| poly(ADP-ribose) like glycohydrolase [Arabidopsis thaliana]
          Length = 547

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = -1

Query: 271 QATKCILSRRWTV*ELWNMLG**KYSSQILKGETHDNFFSWLLPSFAVSSTAILDP 104
           Q TK ILS +WTV +LWNM+   +YS+Q L  +T   FFSWLLPS A ++ AI  P
Sbjct: 494 QVTKWILSHKWTVGDLWNMML--EYSAQRLYKQTSVGFFSWLLPSLATTNKAIQPP 547


>ref|NP_565730.1| poly(ADP-ribose) glycohydrolase 1 [Arabidopsis thaliana]
           gi|75206423|sp|Q9SKB3.2|PARG1_ARATH RecName:
           Full=Poly(ADP-ribose) glycohydrolase 1
           gi|14701908|gb|AAK72256.1|AF394690_1 poly(ADP-ribose)
           glycohydrolase [Arabidopsis thaliana]
           gi|20197842|gb|AAD32285.2| putative poly(ADP-ribose)
           glycohydrolase [Arabidopsis thaliana]
           gi|330253503|gb|AEC08597.1| poly(ADP-ribose)
           glycohydrolase 1 [Arabidopsis thaliana]
          Length = 548

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = -1

Query: 271 QATKCILSRRWTV*ELWNMLG**KYSSQILKGETHDNFFSWLLPSFAVSSTAILDP 104
           Q TK ILS +WTV +LWNM+   +YS+Q L  +T   FFSWLLPS A ++ AI  P
Sbjct: 495 QVTKWILSHKWTVGDLWNMML--EYSAQRLYKQTSVGFFSWLLPSLATTNKAIQPP 548


>ref|XP_002881202.1| hypothetical protein ARALYDRAFT_482111 [Arabidopsis lyrata subsp.
           lyrata] gi|297327041|gb|EFH57461.1| hypothetical protein
           ARALYDRAFT_482111 [Arabidopsis lyrata subsp. lyrata]
          Length = 557

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/56 (50%), Positives = 39/56 (69%)
 Frame = -1

Query: 271 QATKCILSRRWTV*ELWNMLG**KYSSQILKGETHDNFFSWLLPSFAVSSTAILDP 104
           Q TK I+S +WTV +LWNM+   +YS+Q L  +T+  FFSWLLPS A ++ A+  P
Sbjct: 504 QVTKWIISHKWTVGDLWNMML--EYSAQRLYKQTNLGFFSWLLPSLATTNKAVQPP 557


>ref|XP_006293957.1| hypothetical protein CARUB_v10022947mg [Capsella rubella]
           gi|482562665|gb|EOA26855.1| hypothetical protein
           CARUB_v10022947mg [Capsella rubella]
          Length = 543

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/53 (52%), Positives = 38/53 (71%)
 Frame = -1

Query: 271 QATKCILSRRWTV*ELWNMLG**KYSSQILKGETHDNFFSWLLPSFAVSSTAI 113
           Q TK ILS +WTV +LWNM+   +YS+Q L  +T+  FFSWLLPS A ++ +I
Sbjct: 492 QVTKWILSHKWTVGDLWNMML--EYSAQRLNKQTNLGFFSWLLPSLATTNKSI 542


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