BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00022189
         (2697 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007030612.1| Pseudouridine synthase family protein isofor...   927   0.0  
gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus no...   913   0.0  
ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synt...   912   0.0  
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   910   0.0  
ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Popu...   908   0.0  
ref|XP_007030611.1| Pseudouridine synthase family protein, putat...   904   0.0  
emb|CBI34194.3| unnamed protein product [Vitis vinifera]              894   0.0  
ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citr...   884   0.0  
ref|XP_007208186.1| hypothetical protein PRUPE_ppa020985mg [Prun...   880   0.0  
ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric...   879   0.0  
ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synt...   877   0.0  
gb|EYU22643.1| hypothetical protein MIMGU_mgv1a002284mg [Mimulus...   869   0.0  
ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synt...   863   0.0  
ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C...   857   0.0  
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g...   855   0.0  
ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synt...   849   0.0  
ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synt...   849   0.0  
ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synt...   847   0.0  
ref|XP_004494684.1| PREDICTED: multisubstrate pseudouridine synt...   845   0.0  
ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synt...   837   0.0  

>ref|XP_007030612.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
            gi|508719217|gb|EOY11114.1| Pseudouridine synthase family
            protein isoform 2 [Theobroma cacao]
          Length = 732

 Score =  927 bits (2397), Expect = 0.0
 Identities = 472/731 (64%), Positives = 569/731 (77%), Gaps = 22/731 (3%)
 Frame = -1

Query: 2625 LSRLKPFQLKPYCNCNSNSINTESISMKTP--------------EEADVGIICYISQCPG 2488
            +S LKP+    Y +C S   +++S   KTP               E+DVGI+C+IS  PG
Sbjct: 6    VSILKPYH---YFHCKSCPADSKSNLTKTPVIKSSNSLTLMTTITESDVGILCFISHLPG 62

Query: 2487 FRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVEDSKVEKETEIS--HESQIESFRS 2314
            FRG+LKQRYSDFIVNEVD +GNV HLTSLDAPPE V++ + +   +++  + S+I  FRS
Sbjct: 63   FRGILKQRYSDFIVNEVDTEGNVVHLTSLDAPPEAVQEGETKTPDQLNKCYASEIIKFRS 122

Query: 2313 LSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHRTAVHNFFKENFKFLVTDTVDG 2134
            L+GD+DA+ L++FI++I SG+ ED  PIVLSPDS+KSHRTA+HNFFKEN +FLVTDTVDG
Sbjct: 123  LAGDTDADRLEAFINQITSGSEEDICPIVLSPDSDKSHRTAMHNFFKENLRFLVTDTVDG 182

Query: 2133 PDVGSKCIRVRLNSGGNDKGTNKRKRKERGERPYDSRGFDDWPEQVGKFLRFHLYKENKD 1954
            PD  SKCIRVRLNSG N+KG N +KRKERG++PYDSRG   WPE +GKFLRFHLYKENKD
Sbjct: 183  PDSSSKCIRVRLNSGNNNKGRNSKKRKERGDKPYDSRGSSHWPEHLGKFLRFHLYKENKD 242

Query: 1953 TQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFKQQAKRLAALNERLIGIKVGNF 1774
            TQEALGLIGKMLGIQ RSFGFAGTKDKRSVSTQRVTVFKQ A RLAALNERLIGIKVG+F
Sbjct: 243  TQEALGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNERLIGIKVGDF 302

Query: 1773 CYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSLGKKGFINYFGLQRFGSASVPT 1594
            CYV +        GNRFTI LRG+VA S++TIK +  SLG+ GFINYFGLQRFGS S+PT
Sbjct: 303  CYVKDDFLLGQLLGNRFTIILRGIVADSEETIKASVESLGRHGFINYFGLQRFGSGSIPT 362

Query: 1593 HLIGAALLRGEWKAAVNMILDPREGERDSIREVREYYKESCDIEGTIRQLPRYLVAERAI 1414
            H IGA LLRGEW+AA + ILDPREGERD + + REYYKE+ DIEGT+RQLPR+LVAERA+
Sbjct: 363  HRIGATLLRGEWQAAASTILDPREGERDFVSKAREYYKETGDIEGTLRQLPRHLVAERAM 422

Query: 1413 LQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASVRVQKHGISEVKLGDLVYCK 1234
            LQCL+KCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS+RV+K+G +EV LGDLVYCK
Sbjct: 423  LQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVEKYGSNEVVLGDLVYCK 482

Query: 1233 GTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGMELLEGKDNSVKEVSADDLLGGDYTI 1054
            G   +K ++ V +E E +N ++AYDC   DEI G +L EGK+N VK ++A D+  G+YTI
Sbjct: 483  GNDAEK-VKVVPSEHEDNNFEDAYDCSQLDEISGTDLPEGKNNLVKAITAADISTGNYTI 541

Query: 1053 DDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTESAHNVKEFSITRLSGGYRRVFQKP 874
            +DVVLP+PGSR++YP+ND+A+VYHD+AKKDGISLTES HN+KEFSIT ++G YRRVFQKP
Sbjct: 542  EDVVLPMPGSRIIYPVNDIANVYHDMAKKDGISLTESVHNIKEFSITSMTGSYRRVFQKP 601

Query: 873  IDFEWELLQYTDGNVPLAETDLDIIAKSKSFIIEENNSKT------LSVDCKKQVEGLQN 712
            IDFEWELL YTDG++ L+ETDLD IAK+K   + +    T       S D  + +E  ++
Sbjct: 602  IDFEWELLSYTDGSIALSETDLDKIAKTKPVNLVKEEKPTDGTEGQDSSDHMEHIESFED 661

Query: 711  EMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKALKMGFTLPASCYATMAIRELLKTS 532
            +                      S+  S++  T KALK+ FTLPASCYATMAIRELLKTS
Sbjct: 662  DKKFSTGNVEVEGSREAEPPQIHSLPESNSLGTQKALKLAFTLPASCYATMAIRELLKTS 721

Query: 531  TSVSFHKTLNQ 499
            TSV+FHKTLNQ
Sbjct: 722  TSVAFHKTLNQ 732


>gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus notabilis]
          Length = 784

 Score =  913 bits (2359), Expect = 0.0
 Identities = 467/702 (66%), Positives = 553/702 (78%), Gaps = 9/702 (1%)
 Frame = -1

Query: 2601 LKPYCNCNSNSINTE----SISMKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVD 2434
            LKPY  CN  +I       + +MKT +E+DVGI CYIS  PGFRG+LKQRYSDFIVNEVD
Sbjct: 38   LKPYSLCNYTTIAASHKALTTAMKTLDESDVGIFCYISNLPGFRGILKQRYSDFIVNEVD 97

Query: 2433 CDGNVAHLTSLDAPPEIVEDSKVEK--ETEISHESQIESFRSLSGDSDAESLKSFIDRIN 2260
             DGNV HLTSLDAPPE  E+++ E       S+ S+IESFR L+GDSDAESL++ I++IN
Sbjct: 98   TDGNVVHLTSLDAPPETREETRTETIDAGTKSYTSEIESFRCLAGDSDAESLEALINQIN 157

Query: 2259 SGAGEDASPIVLSPDSNKSHRTAVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGG-N 2083
            SG GE+ SPIVLSP S+KSHRT +HNFFK+NFKFLVTDTVDGPD  SKCIRVRLNSG  N
Sbjct: 158  SGGGEEVSPIVLSPSSDKSHRTEIHNFFKKNFKFLVTDTVDGPDASSKCIRVRLNSGRHN 217

Query: 2082 DKGTNKRKRKERGERPYDSRGFDDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQR 1903
            + G N +KRKERG++P+D RG DDWPE VGKFLRFHLYKENKD+QEALGLIGKMLGIQ R
Sbjct: 218  NHGRNSKKRKERGDKPFDRRGSDDWPEHVGKFLRFHLYKENKDSQEALGLIGKMLGIQPR 277

Query: 1902 SFGFAGTKDKRSVSTQRVTVFKQQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRF 1723
            SFGFAGTKDKRSVSTQRVTVFKQ+A RLAALN+RLIGI+VG+FCYV E        GNRF
Sbjct: 278  SFGFAGTKDKRSVSTQRVTVFKQRASRLAALNDRLIGIQVGDFCYVKEELVLGQLSGNRF 337

Query: 1722 TITLRGVVAKSDDTIKVAANSLGKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVN 1543
            T+TLRGVVA S++TIK +A++LG++GFINYFGLQRFGS SVPT+LIGA L RGEWK AV+
Sbjct: 338  TVTLRGVVADSEETIKASASALGRRGFINYFGLQRFGSGSVPTYLIGAMLFRGEWKDAVH 397

Query: 1542 MILDPREGE--RDSIREVREYYKESCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQAL 1369
            MILDPREG+   D I + REYYKE+ DI+GT+RQLPR+LVAE AILQCL+KCPGNYLQAL
Sbjct: 398  MILDPREGDILLDVITKAREYYKETNDIDGTLRQLPRHLVAENAILQCLKKCPGNYLQAL 457

Query: 1368 KAIPRTLRMMYVHSYQSYLWNHAASVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTEC 1189
            KAIPRTLRMMYVHSYQSYLWNHAAS RVQK+G  +V +GDLV+CK  + +K       +C
Sbjct: 458  KAIPRTLRMMYVHSYQSYLWNHAASTRVQKYGTDQVVVGDLVFCKEHNIEKVKGTASADC 517

Query: 1188 EKDNCDEAYDCGDQDEILGMELLEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYP 1009
            + ++ +  +   D DE+ G EL E ++N VK V+A+D+L G++ IDDVVLPLPGSRV+ P
Sbjct: 518  KDEDSNAIFGSHDIDEVSGAELPEERNNPVKVVAAEDILAGNFAIDDVVLPLPGSRVILP 577

Query: 1008 MNDVADVYHDLAKKDGISLTESAHNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNV 829
             ND+A VYHDLAKKD ISLTESAHNVKEFSIT ++G YRRVFQKP+D+EWELL YT+G +
Sbjct: 578  TNDIAQVYHDLAKKDAISLTESAHNVKEFSITSMTGSYRRVFQKPVDYEWELLTYTNGTI 637

Query: 828  PLAETDLDIIAKSKSFIIEENNSKTLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXX 649
            PLAETDLDIIAKSK   + E N    + +  K+ + ++NE   L                
Sbjct: 638  PLAETDLDIIAKSKPAHVAEENEVNGNEESTKRSKRVENEAV-LQTDDNKVDGEREAELQ 696

Query: 648  XXSICGSDAQTTMKALKMGFTLPASCYATMAIRELLKTSTSV 523
              S CG+++Q    ALK+ FTLPASCYATMAIRELLKTSTSV
Sbjct: 697  AESTCGTNSQEPQMALKLSFTLPASCYATMAIRELLKTSTSV 738


>ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Citrus sinensis]
          Length = 739

 Score =  912 bits (2356), Expect = 0.0
 Identities = 469/720 (65%), Positives = 557/720 (77%), Gaps = 13/720 (1%)
 Frame = -1

Query: 2622 SRLKPFQLKPYCNCNSNSINTESISMKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVN 2443
            S LKP+ L  Y +    ++ T +  MKT +E+D GI+C+IS  PGFRG+LKQRY DFIVN
Sbjct: 22   SALKPYPLFCYNSRFCKTLTTTT--MKTVDESDAGILCFISNLPGFRGILKQRYCDFIVN 79

Query: 2442 EVDCDGNVAHLTSLDAPPEIV----EDSKVEKETEISHESQIESFRSLSGDSDAESLKSF 2275
            EVD D  V HLTSLD PPE       ++K   +   S+ S+IESFRSL+GDSDA+ L++ 
Sbjct: 80   EVDTDRKVVHLTSLDVPPEEAAVEHNETKASDQLNRSYASEIESFRSLAGDSDAQCLETL 139

Query: 2274 IDRINSGAGEDA-SPIVLSPDSNKSHRTAVHNFFKENFKFLVTDTVDGPDVGSKCIRVRL 2098
            I+++ SG  ED+  PIVLS +S+KSHRTA+HNFFK+NFKFLVTDTVDGPD  SKCIRVRL
Sbjct: 140  INQVTSGKNEDSIPPIVLSANSDKSHRTAIHNFFKDNFKFLVTDTVDGPDASSKCIRVRL 199

Query: 2097 NSGGNDK--GTNKRKRKERGERPYDSRGFDDWPEQVGKFLRFHLYKENKDTQEALGLIGK 1924
            NSGGN+   G N +KRKERG+ P+DSRG ++WPEQ+GKFLRFHLYKENKDTQEALGLI K
Sbjct: 200  NSGGNNNSMGRNSKKRKERGDNPFDSRGSENWPEQLGKFLRFHLYKENKDTQEALGLISK 259

Query: 1923 MLGIQQRSFGFAGTKDKRSVSTQRVTVFKQQAKRLAALNERLIGIKVGNFCYVNEXXXXX 1744
            MLGI  RSFGFAGTKDKRSVSTQRVTVFKQ+A +LAALN+RLIGI++G+FCYV E     
Sbjct: 260  MLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAALNKRLIGIRLGDFCYVKEGLLLG 319

Query: 1743 XXXGNRFTITLRGVVAKSDDTIKVAANSLGKKGFINYFGLQRFGSASVPTHLIGAALLRG 1564
               GNRFTITLRGVV  S+D IK +ANSLG+ GFINYFGLQRFGS SVPTHL+GA LLRG
Sbjct: 320  QLLGNRFTITLRGVVVDSEDVIKASANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRG 379

Query: 1563 EWKAAVNMILDPREGERDSIREVREYYKESCDIEGTIRQLPRYLVAERAILQCLRKCPGN 1384
            EWK+AV MILDPREGER+ I + REYYKE+ DI+GT+R+LPR+LVAERAILQCL+KCPGN
Sbjct: 380  EWKSAVKMILDPREGERNEISKAREYYKETDDIDGTLRKLPRHLVAERAILQCLKKCPGN 439

Query: 1383 YLQALKAIPRTLRMMYVHSYQSYLWNHAASVRVQKHGISEVKLGDLVYCKGTSEQKPIEG 1204
            YLQALKAIPRTLRMMYVHSYQS+LWNHAAS RVQKHG   V +GDLV+CKG   +K +  
Sbjct: 440  YLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGC 499

Query: 1203 VDTECEKDNCDEAYDCGDQDEILGMELLEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGS 1024
            V+ E E ++ ++A D    DE+   +  +G+ N VK V+A+D+  G YTIDDVVLPLPGS
Sbjct: 500  VNPEFEYESSNDADDSSHLDEVPETDHPDGRHNLVKTVTAEDINSGKYTIDDVVLPLPGS 559

Query: 1023 RVLYPMNDVADVYHDLAKKDGISLTESAHNVKEFSITRLSGGYRRVFQKPIDFEWELLQY 844
            RV+YPMNDVA+VYH LA+KDGI+LTES HNVKEFSIT ++G YRRVFQKP+DFEWELL Y
Sbjct: 560  RVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTY 619

Query: 843  TDGNVPLAETDLDIIAKSK-SFIIEE-----NNSKTLSVDCKKQVEGLQNEMTPLGXXXX 682
             DGN PLAETDLD IAK K + I++E      N K    DC KQ E L  ++        
Sbjct: 620  IDGNKPLAETDLDKIAKDKLANIVKEEEAVCGNKKKDPSDCMKQSESLSKDIKLSTENNE 679

Query: 681  XXXXXXXXXXXXXSICGSDAQTTMKALKMGFTLPASCYATMAIRELLKTSTSVSFHKTLN 502
                         S+CG+D+Q    ALK+G TLP+SCYATMAIRELLKTSTSV+FHKTLN
Sbjct: 680  AACAKEVKQPHVESVCGADSQGKQMALKLGLTLPSSCYATMAIRELLKTSTSVAFHKTLN 739


>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
            vinifera]
          Length = 694

 Score =  910 bits (2352), Expect = 0.0
 Identities = 468/691 (67%), Positives = 538/691 (77%), Gaps = 9/691 (1%)
 Frame = -1

Query: 2547 MKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVE--D 2374
            MK  EE+DVGI  YISQ PGFRG+LKQRY DFIVNEVD DGNV HLTSLDAPPE +E  +
Sbjct: 1    MKHLEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESMEKNE 60

Query: 2373 SKVEKETEISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHRT 2194
            +K+  ++   + S+IE FRSL GDSD E LK  ID++ SG  +  SPIVLS  S+KSHRT
Sbjct: 61   TKISDQSNKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSHRT 120

Query: 2193 AVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGGN-DKGTNKRKRKERGERPYDSRGF 2017
            AVHNFFKEN KFLVTDT+DGPD  SKCIRVRLNSGG+ + G N RKRK+R ++P+DSRG 
Sbjct: 121  AVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDRRDKPFDSRGS 180

Query: 2016 DDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFK 1837
            D+W E VGKFLRFHLYKENKDTQEA+GLIGKMLGIQ RSFGFAGTKDKRSVSTQRVTVFK
Sbjct: 181  DNWSEHVGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFK 240

Query: 1836 QQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSL 1657
            Q A RLAALNERLIGIKVG+FC+V E        GNRFTITLRGVVA S++TIK +A++L
Sbjct: 241  QHANRLAALNERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEETIKASADAL 300

Query: 1656 GKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVREYYKE 1477
            G+ GFINYFGLQRFGS SVPTHLIGAALLRGEW+ AV++ILDPREGERD+IR+ REYYKE
Sbjct: 301  GRLGFINYFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGERDAIRKAREYYKE 360

Query: 1476 SCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 1297
            S DIEGT+RQ PR+LVAERAILQCL+K PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA
Sbjct: 361  SDDIEGTLRQFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 420

Query: 1296 SVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGMELLE 1117
            S+RVQ +G  +V LGDLVYCKG + +K    V++E + D C +A+D    DEI   +L E
Sbjct: 421  SMRVQNYGTKQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPE 480

Query: 1116 GKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTESAH 937
             +++ VK + A+DLL G+YTIDDVVLPLPGSR +YP ND+A VYHD AKKD ISLTESAH
Sbjct: 481  ERNDPVKALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAH 540

Query: 936  NVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSKSFII------ 775
            +VKEFSIT ++GG+RRVFQKPIDFEWELL YT+GN+PLAETD D I KSK   I      
Sbjct: 541  SVKEFSITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGEDS 600

Query: 774  EENNSKTLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKALKM 595
               N K  S  C KQ E  ++ +                         S A    +ALK+
Sbjct: 601  RNGNEKENSFQCMKQSESFEHNVNLSTDNNEPNGVTEIGLPQVEPQFESGAPEAQRALKL 660

Query: 594  GFTLPASCYATMAIRELLKTSTSVSFHKTLN 502
             FTLPASCYATMAIRELLKTSTSV+F KTLN
Sbjct: 661  SFTLPASCYATMAIRELLKTSTSVAFQKTLN 691


>ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Populus trichocarpa]
            gi|550338143|gb|ERP60572.1| hypothetical protein
            POPTR_0005s05300g [Populus trichocarpa]
          Length = 752

 Score =  908 bits (2347), Expect = 0.0
 Identities = 479/744 (64%), Positives = 567/744 (76%), Gaps = 29/744 (3%)
 Frame = -1

Query: 2643 PSFATV-LSRLKPFQLKPYCNCNSNSINTESISMKTP-----EEADVGIICYISQCPGFR 2482
            PSF    L++L    LKPY       + T  + +  P     EE+DVGI+CYISQ PGFR
Sbjct: 15   PSFEIYGLTQLLKQVLKPYKG-QPTRLATSRVPVPVPSTASMEESDVGILCYISQLPGFR 73

Query: 2481 GVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVEDSKV-------EKETEI-SHESQIE 2326
            G+LKQRY+DFIVNEVD DGNV HLT L+ PP++VE++K        EK +E  S+E++IE
Sbjct: 74   GILKQRYADFIVNEVDTDGNVVHLTCLEPPPQMVEETKECGAKVSDEKMSESKSYEAEIE 133

Query: 2325 SFRSLSGDSDAESLKSFIDRINSGAG-EDASP-IVLSPDSNKSHRTAVHNFFKENFKFLV 2152
             FRSL+GDSDAE L+S I +++S  G ED+ P IVLSPDS+K+HRTAVHNFFK+NFKFLV
Sbjct: 134  LFRSLAGDSDAEKLESLISQVDSCTGSEDSVPHIVLSPDSDKTHRTAVHNFFKQNFKFLV 193

Query: 2151 TDTVDGPDVGSKCIRVRLNSGGN-DKGTNKRKRKERGERPYDSRGFDDWPEQVGKFLRFH 1975
            TDT DGPD  SKCIRVRL+SGG+ + G N +KRKERGE+P+DSRG  +WPE +GKFLRFH
Sbjct: 194  TDTTDGPDASSKCIRVRLDSGGHKNNGRNSKKRKERGEKPFDSRGSSNWPEHLGKFLRFH 253

Query: 1974 LYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFKQQAKRLAALNERLI 1795
            LYKENKDTQEALG+IGKMLGIQ +SFGFAGTKDKR+VSTQRVTVFKQQA RLAALN+RLI
Sbjct: 254  LYKENKDTQEALGIIGKMLGIQSKSFGFAGTKDKRAVSTQRVTVFKQQASRLAALNDRLI 313

Query: 1794 GIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSLGKKGFINYFGLQRF 1615
            GIKVG+FC+V E        GNRFT+TLRGV+A S+DTIK AA+SLG+ GFINYFGLQRF
Sbjct: 314  GIKVGDFCHVKEGLLLGRLLGNRFTVTLRGVIADSEDTIKAAADSLGRHGFINYFGLQRF 373

Query: 1614 GSASVPTHLIGAALLRGEWKAAVNMILDPREGE-----RDSIREVREYYKESCDIEGTIR 1450
            G+ SVPTHLIGAALLRGEWK AV+MILDPREG+        IR+ REYYKES DIEGT+R
Sbjct: 374  GTGSVPTHLIGAALLRGEWKTAVSMILDPREGDILLLFPYVIRKAREYYKESNDIEGTLR 433

Query: 1449 QLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASVRVQKHGI 1270
            QLPR+LVAERA+LQCL+KCPG+YLQA+KAIPRTLRMMYVH YQSYLWNHAAS RVQK+G 
Sbjct: 434  QLPRHLVAERAVLQCLKKCPGDYLQAMKAIPRTLRMMYVHGYQSYLWNHAASERVQKYGF 493

Query: 1269 SEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGMELLEGKDNSVKEV 1090
             +V LGDLVYCKG   +K   GV++EC  DNCD+ YDC   DE  G +LLE K+  VK V
Sbjct: 494  DQVLLGDLVYCKGDDSEKETVGVNSECNDDNCDDTYDCSHLDETSGTDLLERKNTLVKVV 553

Query: 1089 SADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTESAHNVKEFSITR 910
            + +D+  G+YT+DDVVLP+PGSRV++P N++A VYHDLAKKD I+LTES H VKEFSIT 
Sbjct: 554  TVEDMSTGNYTVDDVVLPMPGSRVIFPTNEIAKVYHDLAKKDAINLTESVHRVKEFSITS 613

Query: 909  LSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAK--SKSFIIEENNSK-----TL 751
            ++G YRRVFQKP+DFEWELL Y D N PLAETDLD I+K  S + I +E   K      L
Sbjct: 614  MTGSYRRVFQKPLDFEWELLTYNDSNKPLAETDLDKISKTGSTNIIKQEEQGKGDEDNDL 673

Query: 750  SVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKALKMGFTLPASC 571
            S DC K     +N +                      + GS+ Q T  ALK+  TLPASC
Sbjct: 674  S-DCTKLPVCSRNSIA----LSSDTNEESEREVESEQVSGSNWQETQMALKLSLTLPASC 728

Query: 570  YATMAIRELLKTSTSVSFHKTLNQ 499
            YATMAIRELLKTSTSV++HKTLNQ
Sbjct: 729  YATMAIRELLKTSTSVAYHKTLNQ 752


>ref|XP_007030611.1| Pseudouridine synthase family protein, putative isoform 1 [Theobroma
            cacao] gi|508719216|gb|EOY11113.1| Pseudouridine synthase
            family protein, putative isoform 1 [Theobroma cacao]
          Length = 763

 Score =  904 bits (2337), Expect = 0.0
 Identities = 471/762 (61%), Positives = 566/762 (74%), Gaps = 53/762 (6%)
 Frame = -1

Query: 2625 LSRLKPFQLKPYCNCNSNSINTESISMKTP--------------EEADVGIICYISQCPG 2488
            +S LKP+    Y +C S   +++S   KTP               E+DVGI+C+IS  PG
Sbjct: 6    VSILKPYH---YFHCKSCPADSKSNLTKTPVIKSSNSLTLMTTITESDVGILCFISHLPG 62

Query: 2487 FRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVED---------------SKVEKET 2353
            FRG+LKQRYSDFIVNEVD +GNV HLTSLDAPPE++ D               +K   + 
Sbjct: 63   FRGILKQRYSDFIVNEVDTEGNVVHLTSLDAPPEVMIDVFSLNKFTQAVQEGETKTPDQL 122

Query: 2352 EISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHRTAVHNFFK 2173
               + S+I  FRSL+GD+DA+ L++FI++I SG+ ED  PIVLSPDS+KSHRTA+HNFFK
Sbjct: 123  NKCYASEIIKFRSLAGDTDADRLEAFINQITSGSEEDICPIVLSPDSDKSHRTAMHNFFK 182

Query: 2172 ENFKFLVTDTVDGPDVGSKCIRVRLNSGGNDKGTNKRKRKERGERPYDSRGFDDWPEQVG 1993
            EN +FLVTDTVDGPD  SKCIRVRLNSG N+KG N +KRKERG++PYDSRG   WPE +G
Sbjct: 183  ENLRFLVTDTVDGPDSSSKCIRVRLNSGNNNKGRNSKKRKERGDKPYDSRGSSHWPEHLG 242

Query: 1992 KFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFKQQAKRLAA 1813
            KFLRFHLYKENKDTQEALGLIGKMLGIQ RSFGFAGTKDKRSVSTQRVTVFKQ A RLAA
Sbjct: 243  KFLRFHLYKENKDTQEALGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAA 302

Query: 1812 LNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSLGKKGFINY 1633
            LNERLIGIKVG+FCYV +        GNRFTI LRG+VA S++TIK +  SLG+ GFINY
Sbjct: 303  LNERLIGIKVGDFCYVKDDFLLGQLLGNRFTIILRGIVADSEETIKASVESLGRHGFINY 362

Query: 1632 FGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSI----------------- 1504
            FGLQRFGS S+PTH IGA LLRGEW+AA + ILDPREG+  S+                 
Sbjct: 363  FGLQRFGSGSIPTHRIGATLLRGEWQAAASTILDPREGDILSLTFFFPFLLGKALFRCLT 422

Query: 1503 -REVREYYKESCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHS 1327
             +  REYYKE+ DIEGT+RQLPR+LVAERA+LQCL+KCPGNYLQALKAIPRTLRMMYVHS
Sbjct: 423  TQRAREYYKETGDIEGTLRQLPRHLVAERAMLQCLKKCPGNYLQALKAIPRTLRMMYVHS 482

Query: 1326 YQSYLWNHAASVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQ 1147
            YQSYLWNHAAS+RV+K+G +EV LGDLVYCKG   +K ++ V +E E +N ++AYDC   
Sbjct: 483  YQSYLWNHAASMRVEKYGSNEVVLGDLVYCKGNDAEK-VKVVPSEHEDNNFEDAYDCSQL 541

Query: 1146 DEILGMELLEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKK 967
            DEI G +L EGK+N VK ++A D+  G+YTI+DVVLP+PGSR++YP+ND+A+VYHD+AKK
Sbjct: 542  DEISGTDLPEGKNNLVKAITAADISTGNYTIEDVVLPMPGSRIIYPVNDIANVYHDMAKK 601

Query: 966  DGISLTESAHNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSK 787
            DGISLTES HN+KEFSIT ++G YRRVFQKPIDFEWELL YTDG++ L+ETDLD IAK+K
Sbjct: 602  DGISLTESVHNIKEFSITSMTGSYRRVFQKPIDFEWELLSYTDGSIALSETDLDKIAKTK 661

Query: 786  SFIIEENNSKT------LSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSD 625
               + +    T       S D  + +E  +++                      S+  S+
Sbjct: 662  PVNLVKEEKPTDGTEGQDSSDHMEHIESFEDDKKFSTGNVEVEGSREAEPPQIHSLPESN 721

Query: 624  AQTTMKALKMGFTLPASCYATMAIRELLKTSTSVSFHKTLNQ 499
            +  T KALK+ FTLPASCYATMAIRELLKTSTSV+FHKTLNQ
Sbjct: 722  SLGTQKALKLAFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 763


>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  894 bits (2311), Expect = 0.0
 Identities = 463/691 (67%), Positives = 534/691 (77%), Gaps = 9/691 (1%)
 Frame = -1

Query: 2547 MKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVE--D 2374
            MK  EE+DVGI  YISQ PGFRG+LKQRY DFIVNEVD DGNV HLTSLDAPPE +E  +
Sbjct: 1    MKHLEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESMEKNE 60

Query: 2373 SKVEKETEISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHRT 2194
            +K+  ++   + S+IE FRSL GDSD E LK  ID++ SG  +  SPIVLS  S+KSHRT
Sbjct: 61   TKISDQSNKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSHRT 120

Query: 2193 AVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGGN-DKGTNKRKRKERGERPYDSRGF 2017
            AVHNFFKEN KFLVTDT+DGPD  SKCIRVRLNSGG+ + G N RKRK+R ++P+DSRG 
Sbjct: 121  AVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDRRDKPFDSRGS 180

Query: 2016 DDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFK 1837
            D+W E VGKFLRFHLYKENKDTQEA+GLIGKMLGIQ RSFGFAGTKDKRSVSTQRVTVFK
Sbjct: 181  DNWSEHVGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFK 240

Query: 1836 QQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSL 1657
            Q A RLAALNERLIGIKVG+FC+V E        GNRFTITLRGVVA S++TIK +A++L
Sbjct: 241  QHANRLAALNERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEETIKASADAL 300

Query: 1656 GKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVREYYKE 1477
            G+ GFINYFGLQRFGS SVPTHLIGAALLRGEW+ AV++ILDPREG+   + + REYYKE
Sbjct: 301  GRLGFINYFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGDI-LLLKAREYYKE 359

Query: 1476 SCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 1297
            S DIEGT+RQ PR+LVAERAILQCL+K PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA
Sbjct: 360  SDDIEGTLRQFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 419

Query: 1296 SVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGMELLE 1117
            S+RVQ +G  +V LGDLVYCKG + +K    V++E + D C +A+D    DEI   +L E
Sbjct: 420  SMRVQNYGTKQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPE 479

Query: 1116 GKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTESAH 937
             +++ VK + A+DLL G+YTIDDVVLPLPGSR +YP ND+A VYHD AKKD ISLTESAH
Sbjct: 480  ERNDPVKALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAH 539

Query: 936  NVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSKSFII------ 775
            +VKEFSIT ++GG+RRVFQKPIDFEWELL YT+GN+PLAETD D I KSK   I      
Sbjct: 540  SVKEFSITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGEDS 599

Query: 774  EENNSKTLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKALKM 595
               N K  S  C KQ E  ++ +                         S A    +ALK+
Sbjct: 600  RNGNEKENSFQCMKQSESFEHNVNLSTDNNEPNGVTEIGLPQVEPQFESGAPEAQRALKL 659

Query: 594  GFTLPASCYATMAIRELLKTSTSVSFHKTLN 502
             FTLPASCYATMAIRELLKTSTSV+F KTLN
Sbjct: 660  SFTLPASCYATMAIRELLKTSTSVAFQKTLN 690


>ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citrus clementina]
            gi|557535111|gb|ESR46229.1| hypothetical protein
            CICLE_v10003382mg [Citrus clementina]
          Length = 697

 Score =  884 bits (2283), Expect = 0.0
 Identities = 454/689 (65%), Positives = 537/689 (77%), Gaps = 13/689 (1%)
 Frame = -1

Query: 2547 MKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIV---- 2380
            MKT +E+D GI+C+IS  PGFRG+LKQRY DFIVNEVD D  V HLTSLD PPE      
Sbjct: 1    MKTVDESDAGILCFISNLPGFRGILKQRYCDFIVNEVDTDRKVVHLTSLDVPPEEAAVEH 60

Query: 2379 EDSKVEKETEISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDA-SPIVLSPDSNKS 2203
             ++K   +   S+ S+IESFRSL+GDSDA+ L++ I+++ SG  ED+  PIVLS +S+KS
Sbjct: 61   NETKASDQLNRSYASEIESFRSLAGDSDAQCLETLINQVTSGKNEDSIPPIVLSANSDKS 120

Query: 2202 HRTAVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGGNDK--GTNKRKRKERGERPYD 2029
            HRTA+HNFFK+NFKFLVTDTVDGPD  SKCIRVRLNSGGN+   G N +KRKERG+ P+D
Sbjct: 121  HRTAIHNFFKDNFKFLVTDTVDGPDASSKCIRVRLNSGGNNNSMGRNSKKRKERGDNPFD 180

Query: 2028 SRGFDDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRV 1849
            SRG ++WPEQ+GKFLRFHLYKENKDTQEALGLI KMLGI  RSFGFAGTKDKRSVSTQRV
Sbjct: 181  SRGSENWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRV 240

Query: 1848 TVFKQQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVA 1669
            TVFKQ+A +LAALN+RLIGI++G+FCYV E        GNRFTITLRGVV  S+D IK +
Sbjct: 241  TVFKQRASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKAS 300

Query: 1668 ANSLGKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVRE 1489
            ANSLG+ GFINYFGLQRFGS SVPTHL+GA LLRGEWK+AV MILDPREG+   + + RE
Sbjct: 301  ANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGDI-LLFKARE 359

Query: 1488 YYKESCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLW 1309
            YYKE+ DI+GT+R+LPR+LVAERAILQCL+KCPGNYLQALKAIPRTLRMMYVHSYQS+LW
Sbjct: 360  YYKETDDIDGTLRKLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLW 419

Query: 1308 NHAASVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGM 1129
            NHAAS RVQKHG   V +GDLV+CKG   +K +  V+ E E ++ ++A D    DE+   
Sbjct: 420  NHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYESSNDADDSSHLDEVPET 479

Query: 1128 ELLEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLT 949
            +  +G+ N VK V+A+D+  G YTIDDVVLPLPGSRV+YPMNDVA+VYH LA+KDGI+LT
Sbjct: 480  DHPDGRHNLVKTVTAEDINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLT 539

Query: 948  ESAHNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSK-SFIIE 772
            ES HNVKEFSIT ++G YRRVFQKP+DFEWELL Y DGN PLAETDLD IAK K + I++
Sbjct: 540  ESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAKDKLANIVK 599

Query: 771  E-----NNSKTLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMK 607
            E      N K    DC KQ E L  ++                     S+CG+D+Q    
Sbjct: 600  EEEAVCGNKKKDPSDCMKQSESLSKDIKLSTENNEAACAKEVKQPHVESVCGADSQGKQM 659

Query: 606  ALKMGFTLPASCYATMAIRELLKTSTSVS 520
            ALK+G TLP+SCYATMAIRELLKTSTSVS
Sbjct: 660  ALKLGLTLPSSCYATMAIRELLKTSTSVS 688


>ref|XP_007208186.1| hypothetical protein PRUPE_ppa020985mg [Prunus persica]
            gi|462403828|gb|EMJ09385.1| hypothetical protein
            PRUPE_ppa020985mg [Prunus persica]
          Length = 691

 Score =  880 bits (2273), Expect = 0.0
 Identities = 453/683 (66%), Positives = 530/683 (77%), Gaps = 8/683 (1%)
 Frame = -1

Query: 2547 MKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVED-- 2374
            MKT EE DVGI CYISQ PGFRG+LKQRYSDF+VNEVD + NV HLT+LDAP E V++  
Sbjct: 1    MKTTEEPDVGIFCYISQLPGFRGILKQRYSDFMVNEVDTEENVVHLTNLDAPAETVKEIE 60

Query: 2373 SKVEKETEISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHRT 2194
            +K    T   + ++IESFRSL    DAE L++ I++INSG+ +   PIVLSPD +KSHRT
Sbjct: 61   TKTHDATSKDYTTEIESFRSLVDPDDAERLEAIINQINSGSEDSILPIVLSPDYDKSHRT 120

Query: 2193 AVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGG-NDKGTNKRKRKERGERPYDSRGF 2017
            AVHNFFKENFKFLVTDTVDGPD  SKCIRVR+NSGG N +G N RKRKERG++P+DSRG 
Sbjct: 121  AVHNFFKENFKFLVTDTVDGPDASSKCIRVRINSGGQNSRGRNSRKRKERGDKPFDSRGS 180

Query: 2016 DDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFK 1837
            DDW E VGKFLRFHLYKENKDTQEALG+I KMLGIQ RSFGFAGTKDKR+V+TQRVTVFK
Sbjct: 181  DDWSENVGKFLRFHLYKENKDTQEALGIIAKMLGIQPRSFGFAGTKDKRAVTTQRVTVFK 240

Query: 1836 QQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSL 1657
            Q A RLAALN+RLIGIKVG+FCYV E        GNRFTITLRGVVA S+DTIK +  +L
Sbjct: 241  QLASRLAALNDRLIGIKVGDFCYVKEGLVLGQLLGNRFTITLRGVVADSEDTIKASVIAL 300

Query: 1656 GKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGE--RDSIREVREYY 1483
            GK+GFINYFGLQRFGS SVPTHLIGA LLRGEWK+ V++ LDPREG+     +   REYY
Sbjct: 301  GKQGFINYFGLQRFGSGSVPTHLIGATLLRGEWKSTVSLFLDPREGDILLMLLGIAREYY 360

Query: 1482 KESCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNH 1303
            KE+ DIEGT+RQLPR+LV+E+AILQCL+KCPGNYLQALKAIPRTLRMMYVHSYQSYLWNH
Sbjct: 361  KETNDIEGTLRQLPRHLVSEKAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNH 420

Query: 1302 AASVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGMEL 1123
            AAS+RVQK+G   V LGDLVYCKG   +K  E V ++C  +N ++  D  D D+I G  L
Sbjct: 421  AASMRVQKYGTDRVVLGDLVYCKGNETEKVSEVVSSKCVDENGNDTLDPIDLDDISGTNL 480

Query: 1122 LEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTES 943
             E + N VK V+A+D+L G+YTIDDVVLP+PGSRV++P ND+A V+HDLAKKD ISLTES
Sbjct: 481  PEERLNLVKAVTAEDILSGNYTIDDVVLPMPGSRVIFPENDIAHVFHDLAKKDAISLTES 540

Query: 942  AHNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSKSFIIEEN- 766
             HNVKEFSIT ++G YRRVFQKP+DFEWE+L+Y DGN PL +TD D IAK+K   + E+ 
Sbjct: 541  VHNVKEFSITSMTGSYRRVFQKPMDFEWEILKYIDGNKPLVDTDFDKIAKTKPSSLNEDG 600

Query: 765  --NSKTLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKALKMG 592
              + KT   +C     GLQ +                      S+C ++ Q T  ALK+ 
Sbjct: 601  RLHDKTKQSECLDNDIGLQTD-------DNGAKAKGEELPQAESLCDTNPQETQTALKLS 653

Query: 591  FTLPASCYATMAIRELLKTSTSV 523
            FTLPASCYATMAIRELLKTSTSV
Sbjct: 654  FTLPASCYATMAIRELLKTSTSV 676


>ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis]
            gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase
            d, putative [Ricinus communis]
          Length = 753

 Score =  879 bits (2270), Expect = 0.0
 Identities = 462/742 (62%), Positives = 560/742 (75%), Gaps = 41/742 (5%)
 Frame = -1

Query: 2601 LKPY------CNCNSNSINTESIS----------MKTPEEADVGIICYISQCPGFRGVLK 2470
            LKPY       +C++++  T + +          M T EE+DVGI CYIS+ PGFRG+LK
Sbjct: 15   LKPYYPPSFSSSCSNSTYRTTTATLVADHSFKTLMTTIEESDVGISCYISKVPGFRGILK 74

Query: 2469 QRYSDFIVNEVDCDGNVAHLTSLDAPPEIVEDSKVEKETEISHE------SQIESFRSLS 2308
            QRYSDFIVNEVD +GNV HLTSL  P EIVE ++ E+E EI+++      ++IESFR L+
Sbjct: 75   QRYSDFIVNEVDNNGNVVHLTSLHVPREIVEVAE-EREEEITNQVGKNYAAEIESFRELA 133

Query: 2307 GDSDAESLKSFIDRINSGAG-EDASPIVLSPDSNKSHRTAVHNFFKENFKFLVTDTVDGP 2131
            GD+D + L++FI+++ S     + SPI+LSPDS+K+HRTA HNFFKE  KFLVTDTVDGP
Sbjct: 134  GDADTQRLEAFINQVISEDNCINISPILLSPDSDKAHRTATHNFFKEKLKFLVTDTVDGP 193

Query: 2130 DVGSKCIRVRLNSGGN--DKGTNKRKRKERGERPYDSRGFDDWPEQVGKFLRFHLYKENK 1957
            D  SKCIRVRLNS GN  +   N +KRK+R ++P+DSRG D WPE +GKFLRFHLYKENK
Sbjct: 194  DASSKCIRVRLNSRGNINEGNRNSKKRKDRNDKPFDSRGSDHWPEHLGKFLRFHLYKENK 253

Query: 1956 DTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFKQQAKRLAALNERLIGIKVGN 1777
            DTQEA+GLIGKMLGIQ RSFGFAGTKDKRSVSTQRVTVFKQ A RLAALN+RLIGIKVG+
Sbjct: 254  DTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNDRLIGIKVGD 313

Query: 1776 FCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSLGKKGFINYFGLQRFGSASVP 1597
            FCYVNE        GNRFT+TLRGVVA S+DTIK +A+SLG+ GFINYFGLQRFGS SVP
Sbjct: 314  FCYVNEGLLLGQLLGNRFTVTLRGVVADSEDTIKGSADSLGRHGFINYFGLQRFGSGSVP 373

Query: 1596 THLIGAALLRGEWKAAVNMILDPREGERDSI-------REVREYYKESCDIEGTIRQLPR 1438
            THLIGAALLRGEWK AV+MILDPREG+   +       R  REYYKES DI+GT+RQLPR
Sbjct: 374  THLIGAALLRGEWKYAVSMILDPREGDILLLVICFMWMRMAREYYKESDDIDGTLRQLPR 433

Query: 1437 YLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASVRVQKHGISEVK 1258
            YL AERA+LQCL+KCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS+RVQK+G  +V 
Sbjct: 434  YLTAERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDQVV 493

Query: 1257 LGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGMELLEGKDNSVK---EVS 1087
            +GDLVYCKG   ++ I   ++ CE D+C++ Y C + DE  G +L E KD  VK    V+
Sbjct: 494  VGDLVYCKGDDTEREIGSANSACEDDDCEDMYGCSNLDETSGTDLSERKDTLVKVEQAVN 553

Query: 1086 ADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTESAHNVKEFSITRL 907
            A+DL  G+YTI+DV+LP+PGSRV YP ND+A VYHDLA+KD I+L ES H+ KEFSIT +
Sbjct: 554  AEDLSTGNYTINDVILPMPGSRVSYPTNDIAKVYHDLAEKDAINLAESVHSAKEFSITSM 613

Query: 906  SGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSKSFII------EENNSKTLSV 745
            +G YRRVFQKP+DFEWE+L YTDG  PLAETD++ +AK+KS  +      ++N++K+ S 
Sbjct: 614  TGSYRRVFQKPMDFEWEILSYTDGTTPLAETDMEKLAKAKSIELNKEEETKKNDTKSPS- 672

Query: 744  DCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKALKMGFTLPASCYA 565
            DC +Q     N++  L                   + G + +    ALK+ FTLPASCYA
Sbjct: 673  DCMRQPMSSGNDL-HLSAEYNREGEREVEVAKVEPLYGPNTRGAQTALKLTFTLPASCYA 731

Query: 564  TMAIRELLKTSTSVSFHKTLNQ 499
            TMAIRELLKTSTSV+FHKTLNQ
Sbjct: 732  TMAIRELLKTSTSVAFHKTLNQ 753


>ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 2
            [Fragaria vesca subsp. vesca]
          Length = 693

 Score =  877 bits (2266), Expect = 0.0
 Identities = 444/693 (64%), Positives = 534/693 (77%), Gaps = 13/693 (1%)
 Frame = -1

Query: 2541 TPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVEDS--K 2368
            T +E++VGI CYIS  PGFRG+LKQRYSDF+VNEVD +GNV HLT+L+APPE+V+++  K
Sbjct: 2    TTQESEVGIFCYISPLPGFRGILKQRYSDFMVNEVDMEGNVVHLTNLEAPPEVVKENGAK 61

Query: 2367 VEKETEISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHRTAV 2188
             E      + ++IE FR L+   D E L++FI  +NSG+ +   PIVLSPD +K HRTAV
Sbjct: 62   TEDAASKDYSAEIEKFRCLASGEDVERLEAFIREVNSGSEDGVMPIVLSPDYDKVHRTAV 121

Query: 2187 HNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGG-NDKGTNKRKRKERGERPYDSRGFDD 2011
            HNFFKEN KFLVTD VDGPD  SKCIRVRLNSGG N +G N +KRKERG++P+DSRG DD
Sbjct: 122  HNFFKENLKFLVTDAVDGPDASSKCIRVRLNSGGQNGRGRNSKKRKERGDKPFDSRGVDD 181

Query: 2010 WPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFKQQ 1831
            W E VGKFLRFHL+KENKDTQEALG+IGKMLGIQ R+FGFAGTKDKR+V+ QRVTVFKQ 
Sbjct: 182  WSEHVGKFLRFHLFKENKDTQEALGVIGKMLGIQPRAFGFAGTKDKRAVTCQRVTVFKQF 241

Query: 1830 AKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSLGK 1651
            A RLAALN+RLIGIKVG+FCYV E        GNRFTITLRGVVA S+D I+ +AN+LGK
Sbjct: 242  ASRLAALNDRLIGIKVGDFCYVKEGLSLGQLLGNRFTITLRGVVADSEDIIQASANALGK 301

Query: 1650 KGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVREYYKESC 1471
            +GF+NYFGLQRFGS S+PTHLIGA+LLRGEWK+ V+M+L+PREGERD I E R+YYKES 
Sbjct: 302  QGFVNYFGLQRFGSGSIPTHLIGASLLRGEWKSTVSMMLEPREGERDVITEARKYYKESN 361

Query: 1470 DIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASV 1291
            DI+GT+R+LPRYLVAERA+LQCL+KCPGNY QALKA+PRTLRMMYVHSYQSYLWNHAAS+
Sbjct: 362  DIDGTLRKLPRYLVAERAVLQCLKKCPGNYSQALKAVPRTLRMMYVHSYQSYLWNHAASM 421

Query: 1290 RVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTEC-----EKDNCDEAYDCGDQDEILGME 1126
            RVQK+G   V +GDLVYCKG   +K    V +EC       +NCD+ +D    D+I    
Sbjct: 422  RVQKYGTDRVVVGDLVYCKGHETEKVTGIVSSECVDENVNDENCDDTFDPNHLDDISETN 481

Query: 1125 LLEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTE 946
            + E + + VK V+A+D+  G YTIDD+VLPLPGSRV++P ND+A V+HDLAKKDGISLTE
Sbjct: 482  VPEARVSLVKAVTAEDINNGTYTIDDIVLPLPGSRVIFPENDIAAVFHDLAKKDGISLTE 541

Query: 945  SAHNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSKSFIIEEN 766
            S HNVKEFSIT ++G YRRVFQKP+DFEW++L+Y DGN+PL ETD + IAK+K   + + 
Sbjct: 542  SVHNVKEFSITNVTGSYRRVFQKPVDFEWDILKYIDGNIPLVETDFEKIAKTKPVNVNKE 601

Query: 765  NSKTLSVDCK-----KQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKAL 601
                +S D       KQ E   N++  L                  S+ G   Q T  AL
Sbjct: 602  YPTGVSGDGSLHDRIKQSECSVNDV-QLPKKDNEVESEGEKLPHVESLGGPIPQGTQIAL 660

Query: 600  KMGFTLPASCYATMAIRELLKTSTSVSFHKTLN 502
            K+ FTLPASCYATMAIRELLKTSTSV+FHKTLN
Sbjct: 661  KLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 693


>gb|EYU22643.1| hypothetical protein MIMGU_mgv1a002284mg [Mimulus guttatus]
          Length = 691

 Score =  869 bits (2245), Expect = 0.0
 Identities = 442/691 (63%), Positives = 528/691 (76%), Gaps = 9/691 (1%)
 Frame = -1

Query: 2547 MKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVEDSK 2368
            M + EE+DVGI+CYIS  PGFRG+LKQRYSDFIVNEVD DGNV HLTSL+APP      K
Sbjct: 1    MTSAEESDVGILCYISPLPGFRGILKQRYSDFIVNEVDMDGNVVHLTSLEAPPSEAAGEK 60

Query: 2367 VEK---ETEISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHR 2197
             EK   + E  + S+IESFR+L GDSDAE LK FID+I+SG   +   IVLSP S+K+HR
Sbjct: 61   KEKVADQLEKDYASEIESFRTLVGDSDAEKLKFFIDQISSGVKTNDESIVLSPSSDKTHR 120

Query: 2196 TAVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSG--GNDKGTNKRKRKERGERPYDSR 2023
            TAVHNFFKE  KFLVTDTVDGPD  SKCIRVRLNSG   N +G N RKRK+RG++ YDSR
Sbjct: 121  TAVHNFFKERLKFLVTDTVDGPDSSSKCIRVRLNSGINNNARGNNSRKRKDRGQQQYDSR 180

Query: 2022 GFDDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTV 1843
            G D WP+  GKFLRF+LYKENKDTQEALG++GKM+G+Q RSFGFAGTKDKRSVSTQRVTV
Sbjct: 181  GTDSWPDNTGKFLRFYLYKENKDTQEALGILGKMIGVQPRSFGFAGTKDKRSVSTQRVTV 240

Query: 1842 FKQQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAAN 1663
            FKQ+A +LAALN+RL GIKVGNFCYV+E        GNRFTITLR V +  +D I+ +A 
Sbjct: 241  FKQRASKLAALNDRLFGIKVGNFCYVDEELVLGKLQGNRFTITLRSVSSDVEDIIRASAT 300

Query: 1662 SLGKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVREYY 1483
            +LG  GFINYFGLQRFGS+S+PTHLIGAALLRGEWKAAV+MILDPREGE+D  R +REYY
Sbjct: 301  ALGNNGFINYFGLQRFGSSSIPTHLIGAALLRGEWKAAVSMILDPREGEKDVTRTIREYY 360

Query: 1482 KESCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNH 1303
            KES DIEGT+RQLPR+LVAER+IL C +K PGNYLQAL AIPRTLRMM+VHSYQSYLWNH
Sbjct: 361  KESGDIEGTLRQLPRHLVAERSILYCFQKNPGNYLQALLAIPRTLRMMFVHSYQSYLWNH 420

Query: 1302 AASVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGMEL 1123
            AAS+RVQK+G+ +V LGDLVYCK    +K  +  ++ECE  N ++ +D    DE+  ++L
Sbjct: 421  AASMRVQKYGMHQVVLGDLVYCKDQEIEKETKFSNSECEDGNGNDTHDDCHVDELSVIDL 480

Query: 1122 LEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTES 943
             E ++  VK +S +D+  G YTIDD+VLPLPGSR+ YP+ND+  +YHD+A+KD ISLT+ 
Sbjct: 481  SEARNTVVKVISEEDIAAGTYTIDDIVLPLPGSRITYPLNDIGKIYHDIARKDNISLTDG 540

Query: 942  AHNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKS-KSFIIEEN 766
            AHN KEFS T ++G YRRVFQKP DFEWELL+YTD N+PLAETDLDIIAKS  S  + ++
Sbjct: 541  AHNSKEFSFTSITGAYRRVFQKPKDFEWELLKYTDANIPLAETDLDIIAKSGTSTCVGDS 600

Query: 765  NSK---TLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKALKM 595
            N K    L   C    E L +++                     S+    A  +  ALK+
Sbjct: 601  NDKEQIKLQNGCSSTPENLDDKIERSTGSEETERVREEDIHIEESLGAPKALESQMALKL 660

Query: 594  GFTLPASCYATMAIRELLKTSTSVSFHKTLN 502
             FTLP+SCYATMAIRELLKTSTSV+FHK +N
Sbjct: 661  SFTLPSSCYATMAIRELLKTSTSVAFHKAMN 691


>ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 1
            [Fragaria vesca subsp. vesca]
          Length = 701

 Score =  863 bits (2231), Expect = 0.0
 Identities = 438/686 (63%), Positives = 527/686 (76%), Gaps = 13/686 (1%)
 Frame = -1

Query: 2541 TPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVEDS--K 2368
            T +E++VGI CYIS  PGFRG+LKQRYSDF+VNEVD +GNV HLT+L+APPE+V+++  K
Sbjct: 2    TTQESEVGIFCYISPLPGFRGILKQRYSDFMVNEVDMEGNVVHLTNLEAPPEVVKENGAK 61

Query: 2367 VEKETEISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHRTAV 2188
             E      + ++IE FR L+   D E L++FI  +NSG+ +   PIVLSPD +K HRTAV
Sbjct: 62   TEDAASKDYSAEIEKFRCLASGEDVERLEAFIREVNSGSEDGVMPIVLSPDYDKVHRTAV 121

Query: 2187 HNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGG-NDKGTNKRKRKERGERPYDSRGFDD 2011
            HNFFKEN KFLVTD VDGPD  SKCIRVRLNSGG N +G N +KRKERG++P+DSRG DD
Sbjct: 122  HNFFKENLKFLVTDAVDGPDASSKCIRVRLNSGGQNGRGRNSKKRKERGDKPFDSRGVDD 181

Query: 2010 WPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFKQQ 1831
            W E VGKFLRFHL+KENKDTQEALG+IGKMLGIQ R+FGFAGTKDKR+V+ QRVTVFKQ 
Sbjct: 182  WSEHVGKFLRFHLFKENKDTQEALGVIGKMLGIQPRAFGFAGTKDKRAVTCQRVTVFKQF 241

Query: 1830 AKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSLGK 1651
            A RLAALN+RLIGIKVG+FCYV E        GNRFTITLRGVVA S+D I+ +AN+LGK
Sbjct: 242  ASRLAALNDRLIGIKVGDFCYVKEGLSLGQLLGNRFTITLRGVVADSEDIIQASANALGK 301

Query: 1650 KGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVREYYKESC 1471
            +GF+NYFGLQRFGS S+PTHLIGA+LLRGEWK+ V+M+L+PREGERD I E R+YYKES 
Sbjct: 302  QGFVNYFGLQRFGSGSIPTHLIGASLLRGEWKSTVSMMLEPREGERDVITEARKYYKESN 361

Query: 1470 DIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASV 1291
            DI+GT+R+LPRYLVAERA+LQCL+KCPGNY QALKA+PRTLRMMYVHSYQSYLWNHAAS+
Sbjct: 362  DIDGTLRKLPRYLVAERAVLQCLKKCPGNYSQALKAVPRTLRMMYVHSYQSYLWNHAASM 421

Query: 1290 RVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTEC-----EKDNCDEAYDCGDQDEILGME 1126
            RVQK+G   V +GDLVYCKG   +K    V +EC       +NCD+ +D    D+I    
Sbjct: 422  RVQKYGTDRVVVGDLVYCKGHETEKVTGIVSSECVDENVNDENCDDTFDPNHLDDISETN 481

Query: 1125 LLEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTE 946
            + E + + VK V+A+D+  G YTIDD+VLPLPGSRV++P ND+A V+HDLAKKDGISLTE
Sbjct: 482  VPEARVSLVKAVTAEDINNGTYTIDDIVLPLPGSRVIFPENDIAAVFHDLAKKDGISLTE 541

Query: 945  SAHNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSKSFIIEEN 766
            S HNVKEFSIT ++G YRRVFQKP+DFEW++L+Y DGN+PL ETD + IAK+K   + + 
Sbjct: 542  SVHNVKEFSITNVTGSYRRVFQKPVDFEWDILKYIDGNIPLVETDFEKIAKTKPVNVNKE 601

Query: 765  NSKTLSVDCK-----KQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKAL 601
                +S D       KQ E   N++  L                  S+ G   Q T  AL
Sbjct: 602  YPTGVSGDGSLHDRIKQSECSVNDV-QLPKKDNEVESEGEKLPHVESLGGPIPQGTQIAL 660

Query: 600  KMGFTLPASCYATMAIRELLKTSTSV 523
            K+ FTLPASCYATMAIRELLKTSTSV
Sbjct: 661  KLSFTLPASCYATMAIRELLKTSTSV 686


>ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C1A4.09-like [Cucumis
            sativus]
          Length = 719

 Score =  857 bits (2215), Expect = 0.0
 Identities = 452/731 (61%), Positives = 538/731 (73%), Gaps = 31/731 (4%)
 Frame = -1

Query: 2601 LKPYCNCNS--------NSINTESISMKTPEEADVGIICYISQCPGFRGVLKQRYSDFIV 2446
            LKPY   NS         S +   ++ K+  E+DVGI+ YIS  PGFRG+LKQRYSDFIV
Sbjct: 14   LKPYFLYNSLTTPKLTNRSSSIAVMTTKSVGESDVGILSYISSLPGFRGILKQRYSDFIV 73

Query: 2445 NEVDCDGNVAHLTSLDAPPEIVEDSK---VEKETEISHESQIESFRSLSGDSDAESLKSF 2275
            NEVD DGNV HLTSLDAPPE++       +   T  S+ S+IE FRSL+GDSDAE L+ F
Sbjct: 74   NEVDTDGNVVHLTSLDAPPEVIVSESGPTIVHSTSQSYASEIELFRSLAGDSDAEILEIF 133

Query: 2274 IDRINSGAGEDASPIVLSPDSNKSHRTAVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLN 2095
            + +INSG  +D  PIV SPD++K+HRTAVHNFFK+ FKFLVTDT+DGPD  SKC+RVR++
Sbjct: 134  LKQINSGVNDDILPIVFSPDTDKTHRTAVHNFFKK-FKFLVTDTIDGPDSSSKCVRVRVD 192

Query: 2094 SGG-NDKGTNKRKRKERGERPYDSRGFDDWPEQVGKFLRFHLYKENKDTQEALGLIGKML 1918
            SG  N++G   +KRKERG++P+DSRG D+WPE VGKFLRFHLYKENKDTQEALGLIGKML
Sbjct: 193  SGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKML 252

Query: 1917 GIQQRSFGFAGTKDKRSVSTQRVTVFKQQAKRLAALNERLIGIKVGNFCYVNEXXXXXXX 1738
            GIQ RSFGFAGTKDKRS+STQRVTVFKQ A R+AALN+RLIGIK+GNF Y+ E       
Sbjct: 253  GIQTRSFGFAGTKDKRSISTQRVTVFKQHASRIAALNDRLIGIKLGNFSYIQEGLLLGQL 312

Query: 1737 XGNRFTITLRGVVAKSDDTIKVAANSLGKKGFINYFGLQRFGSASVPTHLIGAALLRGEW 1558
             GNRFTITLRGVVA S+D IK +A +LG+ GFINYFGLQRFGS SVPTHL+GA+LLRGEW
Sbjct: 313  LGNRFTITLRGVVANSEDVIKASAEALGRHGFINYFGLQRFGSGSVPTHLVGASLLRGEW 372

Query: 1557 KAAVNMILDPREGERDSIREVREYYKESCDIEGTIRQLPRYLVAERAILQCLRKCPGNYL 1378
            K AVNMILDPREG+   +   R+YYKES DI+GT++QLPRYLVAERAILQCL+KCPGNYL
Sbjct: 373  KGAVNMILDPREGDILLLMRARDYYKESDDIDGTLKQLPRYLVAERAILQCLKKCPGNYL 432

Query: 1377 QALKAIPRTLRMMYVHSYQSYLWNHAASVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVD 1198
            QALKAIPRTLRMMYVHSYQSYLWNHAAS+RVQK+GI +V +GDLVYCK    +       
Sbjct: 433  QALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGIDKVVVGDLVYCKENHTETAAVQNS 492

Query: 1197 TECEKDNCDEA--YDCGDQDEILGMELLEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGS 1024
             E E ++C +A  YD    +E+  + L   +   VK V+A D+L G++TIDDVVLPLPGS
Sbjct: 493  EEYEDEDCGDANSYDSCHLEEVCKLGLPTERHKLVKAVTAGDVLSGNFTIDDVVLPLPGS 552

Query: 1023 RVLYPMNDVADVYHDLAKKDGISLTESAHNVKEFSITRLSGGYRRVFQKPIDFEWELLQY 844
            RVLYP ND+A+VY+DLA KD ISLT S HNVKEFSIT ++G YRRVFQ+P D+EWEL+ Y
Sbjct: 553  RVLYPTNDIAEVYNDLATKDSISLTNSVHNVKEFSITSMTGSYRRVFQRPKDYEWELISY 612

Query: 843  TDGNVPLAETDLDIIAKSKSFIIEEN-------------NSKTLSVDCKKQVE----GLQ 715
             D N+PLA++DL  + KS+S  I +              +S   SV CKK ++    G +
Sbjct: 613  VDRNLPLAQSDLHNLLKSQSVEISKEEKIADKSKNEDSLDSTDQSVCCKKNIQLEAGGKE 672

Query: 714  NEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKALKMGFTLPASCYATMAIRELLKT 535
            NE                         G   Q    ALK+ FTLPAS YATMAIRELLKT
Sbjct: 673  NEN------------------------GQGTQDPQMALKLSFTLPASSYATMAIRELLKT 708

Query: 534  STSVSFHKTLN 502
            STSV+FHKTLN
Sbjct: 709  STSVAFHKTLN 719


>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
            gi|52354299|gb|AAU44470.1| hypothetical protein AT3G04820
            [Arabidopsis thaliana] gi|61742699|gb|AAX55170.1|
            hypothetical protein At3g04820 [Arabidopsis thaliana]
            gi|332640619|gb|AEE74140.1| pseudouridine synthase
            [Arabidopsis thaliana]
          Length = 715

 Score =  855 bits (2209), Expect = 0.0
 Identities = 448/719 (62%), Positives = 540/719 (75%), Gaps = 9/719 (1%)
 Frame = -1

Query: 2631 TVLSRLKPFQLKPYCNCNSNS----INTESISMKTPEEADVGIICYISQCPGFRGVLKQR 2464
            TVLS L P  LKPY + +  +    I T    MKT +EADVGI C+ISQ PGFRG+LKQR
Sbjct: 6    TVLSCL-PSLLKPYSSLSWTTKIATIATNFEGMKTVDEADVGISCFISQLPGFRGILKQR 64

Query: 2463 YSDFIVNEVDCDGNVAHLTSLDAPPEIV--EDSKVEKETEI--SHESQIESFRSLSGDSD 2296
            Y+DFIVNEVD DGNV HLTSLD PPE+   E+ K +    +  ++ S +ESF+S+S  +D
Sbjct: 65   YADFIVNEVDMDGNVVHLTSLDLPPEMAVKEEDKAKSCDNVPQNYTSAVESFKSISSVTD 124

Query: 2295 AESLKSFIDRINSGAGEDASPIVLSPDSNKSHRTAVHNFFKENFKFLVTDTVDGPDVGSK 2116
            AE L+  I+++ SG   +  P+VL P S+KS RTA+HNF KENFKFLVTDTVDGPD  SK
Sbjct: 125  AERLEILINQVTSGTDGEVLPVVLDPSSDKSKRTAIHNFVKENFKFLVTDTVDGPDSTSK 184

Query: 2115 CIRVRLNSGGND-KGTNKRKRKERGERPYDSRGFDDWPEQVGKFLRFHLYKENKDTQEAL 1939
            CIRVR+NSG N+ +G   +KRKERG++P+DSRG + WPE VGKFLRFHLYKENKDTQEAL
Sbjct: 185  CIRVRVNSGANNNRGNRSKKRKERGDKPFDSRGSEHWPEHVGKFLRFHLYKENKDTQEAL 244

Query: 1938 GLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFKQQAKRLAALNERLIGIKVGNFCYVNE 1759
            GLIGKMLG+Q +SFGF+GTKDKRSVSTQRVTVFKQQA +LAALN+RL GIKVG+FC V E
Sbjct: 245  GLIGKMLGVQPKSFGFSGTKDKRSVSTQRVTVFKQQASKLAALNKRLFGIKVGDFCNVKE 304

Query: 1758 XXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSLGKKGFINYFGLQRFGSASVPTHLIGA 1579
                    GNRFTITLRGVVA S++TIK +A SLGK GFINYFGLQRFGS SVPTH +GA
Sbjct: 305  GLLLGQLMGNRFTITLRGVVADSEETIKQSAESLGKDGFINYFGLQRFGSGSVPTHHVGA 364

Query: 1578 ALLRGEWKAAVNMILDPREGERDSIREVREYYKESCDIEGTIRQLPRYLVAERAILQCLR 1399
            ALL+GEWK AV+MILDPRE ER  + + REYYKE+ DI+GT+RQLPRYLVAERAILQCL+
Sbjct: 365  ALLKGEWKDAVDMILDPRETERHVVNDAREYYKETGDIDGTLRQLPRYLVAERAILQCLK 424

Query: 1398 KCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASVRVQKHGISEVKLGDLVYCKGTSEQ 1219
            KCPGNYLQALK IPRTLRMMYVHSYQSYLWN+AAS+RV+ +G S+V LGDLV  K  + +
Sbjct: 425  KCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVKNYGTSQVVLGDLVSTKVDAAK 484

Query: 1218 KPIEGVDTECEKDNCDEAYDCGDQDEILGMELLEGKDNSVKEVSADDLLGGDYTIDDVVL 1039
            + ++ + +E   ++ +EA DC   D+   ++L   + + VK VS +DL  G Y+  D+VL
Sbjct: 485  RMVDSLTSE-HNESSEEALDCDQVDDTAVVDLPAERSDLVKVVSIEDLEAGTYSTSDIVL 543

Query: 1038 PLPGSRVLYPMNDVADVYHDLAKKDGISLTESAHNVKEFSITRLSGGYRRVFQKPIDFEW 859
            PLPGSRV+YP ND+A++YHDLAKKDGISLTES H VKEFSIT ++GGYRRVFQKPIDFEW
Sbjct: 544  PLPGSRVIYPSNDIAEIYHDLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKPIDFEW 603

Query: 858  ELLQYTDGNVPLAETDLDIIAKSKSFIIEENNSKTLSVDCKKQVEGLQNEMTPLGXXXXX 679
            ELL YTD N PLAETDLD I  +K   +E+  S     D     E ++++  P       
Sbjct: 604  ELLTYTDSNKPLAETDLDRIPMNKP--VEKVGSTEEIED-----ESMKSDTNPHDSGETN 656

Query: 678  XXXXXXXXXXXXSICGSDAQTTMKALKMGFTLPASCYATMAIRELLKTSTSVSFHKTLN 502
                             D++ T  ALKM  TLP+SCYATMAIRELLKTSTSV++HKTLN
Sbjct: 657  LKDQTDSNEAEKDTGNPDSEQTQMALKMALTLPSSCYATMAIRELLKTSTSVAYHKTLN 715


>ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
            tuberosum]
          Length = 685

 Score =  849 bits (2194), Expect = 0.0
 Identities = 447/689 (64%), Positives = 528/689 (76%), Gaps = 7/689 (1%)
 Frame = -1

Query: 2547 MKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVEDSK 2368
            MKT +E+DVGI CYIS  PGFRG+LKQRYSDFIVNEVD D NV HLT L+AP E  E+  
Sbjct: 1    MKTMDESDVGISCYISNLPGFRGILKQRYSDFIVNEVDLDENVVHLTLLEAPKECSENKD 60

Query: 2367 VEKETEI--SHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHRT 2194
            V    ++  S+ ++IESFRSL+G+SDA+ LK+FID +NSGA      IVLSP S+KSHRT
Sbjct: 61   VNISDQLNRSYVTEIESFRSLAGNSDADKLKAFIDELNSGADVSDESIVLSPSSDKSHRT 120

Query: 2193 AVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGGND-KGTNKRKRKERGERPYDSRGF 2017
            A+HNFFKE  KFLVTDT+DG +  SKC+RVRLN+  N+ +G + RKRK+R ++ YDSRG 
Sbjct: 121  AIHNFFKERLKFLVTDTIDGVEDQSKCVRVRLNNDRNNGRGRSSRKRKDRDDKRYDSRGS 180

Query: 2016 DDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFK 1837
            D WP  +GKFLRFHL+KENKDTQEAL +I KMLG+Q RSFGFAGTKDKR+VSTQRVTVFK
Sbjct: 181  DSWPGHLGKFLRFHLFKENKDTQEALNVIAKMLGVQLRSFGFAGTKDKRAVSTQRVTVFK 240

Query: 1836 QQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSL 1657
            QQA +LAALN+RLIGIKVG+FC+V E        GNRFTITLRGV A+S+D IK +A +L
Sbjct: 241  QQASKLAALNKRLIGIKVGDFCHVKEGLLLGQLYGNRFTITLRGVSAESEDIIKASAVAL 300

Query: 1656 GKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVREYYKE 1477
            GK GFINYFGLQRFGS+SVPTHLIGAALLRGEWKAAV++ILDPREGE+++I  VREYYKE
Sbjct: 301  GKHGFINYFGLQRFGSSSVPTHLIGAALLRGEWKAAVSLILDPREGEKNAISTVREYYKE 360

Query: 1476 SCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 1297
            S DI+GT+RQLPRYLVAE+AILQCL++ PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA
Sbjct: 361  SGDIDGTLRQLPRYLVAEKAILQCLKRSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 420

Query: 1296 SVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGMELLE 1117
            S+RVQKHG  +V LGDLVY K   E K  E    ECE  N +   D  + DEI   +L E
Sbjct: 421  SMRVQKHGFDQVVLGDLVYSK--EEYKVKESFVAECEDVNDNNMDDYSNLDEISETDLPE 478

Query: 1116 GKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTESAH 937
             ++  VK ++ +DL  G Y IDDV+LPLPGSRV+YP ND+ +VY DLA+KD ISLTE+AH
Sbjct: 479  ERNIPVKVINEEDLKSGTYAIDDVLLPLPGSRVIYPSNDIGEVYCDLAQKDDISLTETAH 538

Query: 936  NVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKS-KSFIIEE--- 769
             +KEFSIT ++G YRRVFQKP DFEWELL YTDG +PLAETD D+IA S KS + EE   
Sbjct: 539  KIKEFSITNMTGAYRRVFQKPKDFEWELLSYTDGTIPLAETDFDVIANSVKSKVREEDPT 598

Query: 768  NNSKTLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKALKMGF 589
            N SK L  D      G   +M   G                 S  G +A+ +  ALK+ F
Sbjct: 599  NGSKELPADSSAISVG--GDMLS-GKVCEEKINNEAGMQSEKSQSGGNAEESQMALKLSF 655

Query: 588  TLPASCYATMAIRELLKTSTSVSFHKTLN 502
            TLPASCYATMA+RELLKTSTSV+FHK+LN
Sbjct: 656  TLPASCYATMAVRELLKTSTSVAFHKSLN 684


>ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
            lycopersicum]
          Length = 685

 Score =  849 bits (2194), Expect = 0.0
 Identities = 447/689 (64%), Positives = 528/689 (76%), Gaps = 7/689 (1%)
 Frame = -1

Query: 2547 MKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVEDSK 2368
            MKT +E+DVGI CYIS  PGFRG+LKQRYSDFIVNEVD D NV HL SL+AP E  E+  
Sbjct: 1    MKTMDESDVGISCYISNLPGFRGILKQRYSDFIVNEVDLDENVVHLNSLEAPKECSENKD 60

Query: 2367 VEKETEI--SHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHRT 2194
            V    ++  S+ ++IESFRSL+G+SDA+ LK+FID +NSGA      IVLSP S+KSHRT
Sbjct: 61   VNISDQLNRSYVTEIESFRSLAGNSDADKLKAFIDELNSGADVSDESIVLSPSSDKSHRT 120

Query: 2193 AVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGGND-KGTNKRKRKERGERPYDSRGF 2017
             +HNFFKE  KFLVTDT+DG +  SKC+RVRLN+  N+ +G   RKRK+R ++ YDSRG 
Sbjct: 121  EIHNFFKERLKFLVTDTIDGVEDQSKCVRVRLNNDRNNGRGRYSRKRKDRNDKRYDSRGS 180

Query: 2016 DDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFK 1837
            D WP  +GKFLRFHL+KENKDTQEAL +I KMLG+Q RSFGFAGTKDKR+VSTQRVTVFK
Sbjct: 181  DSWPGHLGKFLRFHLFKENKDTQEALNVIAKMLGVQLRSFGFAGTKDKRAVSTQRVTVFK 240

Query: 1836 QQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSL 1657
            QQA +LAALN+RLIGIKVG+FC+V E        GNRFTITLRGV A+S+D IK +A +L
Sbjct: 241  QQASKLAALNKRLIGIKVGDFCHVKEGLLLGQLYGNRFTITLRGVSAESEDIIKASAVAL 300

Query: 1656 GKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVREYYKE 1477
            GK GFINYFGLQRFGS+SVPTHLIGAALLRGEWKAAV++ILDPREGE+++I  VREYYKE
Sbjct: 301  GKHGFINYFGLQRFGSSSVPTHLIGAALLRGEWKAAVSLILDPREGEKNTISTVREYYKE 360

Query: 1476 SCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 1297
            S DI+GT+RQLPRYLVAE+AILQ L++ PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA
Sbjct: 361  SGDIDGTLRQLPRYLVAEKAILQSLKRSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 420

Query: 1296 SVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGMELLE 1117
            S+RVQKHG  +V LGDLVY K   + K  E    ECE  N +   D  + DEI   +L E
Sbjct: 421  SMRVQKHGFDQVVLGDLVYSK--EDYKVKESFVAECEDVNDNNMDDYSNLDEISETDLPE 478

Query: 1116 GKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTESAH 937
             ++  VK ++ +DL  G YTIDDV+LPL GSRV+YP ND+ +VY DLA+KDGISLTE+AH
Sbjct: 479  ERNIPVKVINEEDLKSGTYTIDDVLLPLSGSRVIYPSNDIGEVYRDLAQKDGISLTETAH 538

Query: 936  NVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKS-KSFIIEE--- 769
             +KEFSIT ++G YRRVFQKP DFEWELL YTDG +PLAETD D+IAKS KS +IEE   
Sbjct: 539  KIKEFSITNMTGAYRRVFQKPKDFEWELLSYTDGTIPLAETDFDVIAKSVKSKVIEEVPS 598

Query: 768  NNSKTLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKALKMGF 589
            N SK L  D      G   +M   G                 S  G +A+ +  ALK+ F
Sbjct: 599  NGSKELPADSSAISVG--GDMLS-GKVCEETINNEAGMQSEKSQSGGNAEESQMALKLSF 655

Query: 588  TLPASCYATMAIRELLKTSTSVSFHKTLN 502
            TLPASCYATMA+RELLKTSTSV+FHK+LN
Sbjct: 656  TLPASCYATMAVRELLKTSTSVAFHKSLN 684


>ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine max]
          Length = 690

 Score =  847 bits (2188), Expect = 0.0
 Identities = 440/695 (63%), Positives = 532/695 (76%), Gaps = 10/695 (1%)
 Frame = -1

Query: 2553 ISMKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVED 2374
            ++MKT EE +VGI C+IS  PGFRG+LKQRYSDFIVNEVD DG V  L+SLDAP E  E 
Sbjct: 1    MAMKTAEEHEVGISCFISDLPGFRGILKQRYSDFIVNEVDRDGTVVQLSSLDAPQEEPES 60

Query: 2373 SKVE----KETEISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNK 2206
            S+       +  +S+ SQIESF+SL+GDSDA  L+ FI++IN+G  +  SPIVLSPDS+K
Sbjct: 61   SQENGTNTSDNVVSYASQIESFKSLAGDSDAVLLEEFINKINAGGEDGVSPIVLSPDSDK 120

Query: 2205 SHRTAVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGG-NDKGTNKRKRKERGERPYD 2029
            SHR A+HNFFKENFKFLVTD VDGPD  SKCIRVRLNS   N+KG N +KRKERG++P+D
Sbjct: 121  SHRKAMHNFFKENFKFLVTDVVDGPDASSKCIRVRLNSAEPNNKGKNSKKRKERGDKPFD 180

Query: 2028 SRGFDDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRV 1849
            SRG ++WP+ VGKFLRFHLYKENKDT EALG+IG ML +Q +SFGFAGTKDKR+V+TQRV
Sbjct: 181  SRGSENWPKNVGKFLRFHLYKENKDTHEALGVIGNMLSVQPKSFGFAGTKDKRAVTTQRV 240

Query: 1848 TVFKQQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVA 1669
            TV+KQ+A RLA+LN+RL GIK+G+FCYV E        GNRFTITLRG+VA S+D IK +
Sbjct: 241  TVYKQRASRLASLNKRLFGIKLGDFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIKAS 300

Query: 1668 ANSLGKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVRE 1489
            A++LG+ GFINYFGLQRFGS S+PTHLIGAALL+GEWK AV+MILDPR+GE+ +I + R+
Sbjct: 301  ADALGRHGFINYFGLQRFGSGSLPTHLIGAALLQGEWKLAVDMILDPRDGEKSAIAKARK 360

Query: 1488 YYKESCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLW 1309
            YYKES D+ GT++QLPRYLVAERA+LQ L+  PGNYLQALK+IPRTLRM+YVHSYQSYLW
Sbjct: 361  YYKESSDVVGTLKQLPRYLVAERAVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLW 420

Query: 1308 NHAASVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGM 1129
            NHAAS RVQK+G   V LGDLVYCK  S  K  E V +E  +D C   YD  ++DEI G 
Sbjct: 421  NHAASKRVQKYGTENVVLGDLVYCKENSTGKVTESVGSEYAED-CSGRYDSNNEDEISG- 478

Query: 1128 ELLEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLT 949
            E+ E  D SVK V  +DL  G YTIDDV+LP+PGSR+ YP N +A+VY DLAKKDGISLT
Sbjct: 479  EIHEEID-SVKVVDVEDLNSGYYTIDDVILPMPGSRIKYPTNHIANVYEDLAKKDGISLT 537

Query: 948  ESAHNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSKSF---- 781
            ES HNV++FSIT ++G YRRVFQKPI+FEWELL Y+D N  L ETDLD + KSK      
Sbjct: 538  ESVHNVEDFSITSITGCYRRVFQKPINFEWELLTYSDSNKQLVETDLDKVNKSKPMGTVK 597

Query: 780  -IIEENNSKTLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKA 604
             +   N     + DC +++E   N++  +                  S+ GS +Q +  A
Sbjct: 598  QMGAANGKNEEAFDCIRELES-SNDVVKV-ENYSEIAGEEIKLPHDESLSGSSSQDSQIA 655

Query: 603  LKMGFTLPASCYATMAIRELLKTSTSVSFHKTLNQ 499
            LK+ FTLPASCYATMAIRELLKTSTSV++HKTLNQ
Sbjct: 656  LKLSFTLPASCYATMAIRELLKTSTSVAYHKTLNQ 690


>ref|XP_004494684.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Cicer arietinum]
          Length = 698

 Score =  845 bits (2182), Expect = 0.0
 Identities = 438/701 (62%), Positives = 533/701 (76%), Gaps = 18/701 (2%)
 Frame = -1

Query: 2547 MKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEI----V 2380
            M + EE DVGI CYIS  PGFRGVLKQRYSDFIVNEVD DG V  L+SL+A  E     V
Sbjct: 1    MNSMEEHDVGISCYISNLPGFRGVLKQRYSDFIVNEVDIDGKVVELSSLEASAEESKVPV 60

Query: 2379 EDSKVEKETE--------ISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVL 2224
            ++SK  +E +        IS+ SQIESF+SL+G+SDA SL+ FI++IN G  +  SPI+L
Sbjct: 61   DESKSVQENKTNTSESEVISYASQIESFKSLAGESDASSLEEFINQINVGGEDSPSPIIL 120

Query: 2223 SPDSNKSHRTAVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGG-NDKGTNKRKRKER 2047
            SPDS+KSHRTAVH FF+ENFKFLVTDTVDGPD  SKCIRVRLNSGG N+KG N RKRK+R
Sbjct: 121  SPDSDKSHRTAVHVFFRENFKFLVTDTVDGPDASSKCIRVRLNSGGPNNKGKNSRKRKDR 180

Query: 2046 GERPYDSRGFDDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRS 1867
              +P+DSRG ++WPE  GKFLRFHL+KENKDTQEALG++G MLGI+ RSFGFAGTKDKR+
Sbjct: 181  DNKPFDSRGSENWPENAGKFLRFHLFKENKDTQEALGVLGNMLGIKSRSFGFAGTKDKRA 240

Query: 1866 VSTQRVTVFKQQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSD 1687
            V+TQRVTV+KQQA++LA+LNE+L GIKVG+FCYVNE        GNRFTITLRG+VA S 
Sbjct: 241  VTTQRVTVYKQQARKLASLNEKLFGIKVGDFCYVNEGLCLGQLLGNRFTITLRGIVADSV 300

Query: 1686 DTIKVAANSLGKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDS 1507
            DTIK AA+SLG+ GFINYFGLQRFGS SVPTH IGAAL RGEWK AV++ILDPR+GER  
Sbjct: 301  DTIKAAADSLGRHGFINYFGLQRFGSGSVPTHRIGAALFRGEWKLAVDLILDPRDGERYV 360

Query: 1506 IREVREYYKESCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHS 1327
            I + R+YYK++ D+ GT++QLP++LVAERA+L+ L++ PGNYLQALK+IPRTLRMMYVHS
Sbjct: 361  IAKARKYYKDTNDVAGTLKQLPQFLVAERAVLKSLKQFPGNYLQALKSIPRTLRMMYVHS 420

Query: 1326 YQSYLWNHAASVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQ 1147
            YQSYLWNHAAS RVQK+G  +V LGDLVYCK     K  E V +EC+ D+C + YD   +
Sbjct: 421  YQSYLWNHAASTRVQKYGTEQVVLGDLVYCKENPPSKATEIVGSECD-DDCGDIYDSNIE 479

Query: 1146 DEILGMELLEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKK 967
            DEI   ++ +  ++SVK V+A+DL    YTIDDV+LP+PGSR +YP ND+  VY+DL  K
Sbjct: 480  DEI-PEDIHDKSNSSVKAVNAEDLNSKSYTIDDVILPMPGSRSIYPANDIVKVYNDLTNK 538

Query: 966  DGISLTESAHNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSK 787
            DGISLTE+ HN KEFS+T ++G YRRVFQKPI+FEWELL YTD N PL ETDLD I KSK
Sbjct: 539  DGISLTENVHNAKEFSMTSVTGSYRRVFQKPINFEWELLTYTDSNKPLVETDLDKIGKSK 598

Query: 786  SFII-----EENNSKTLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDA 622
               +          +T + DC +QVE   ++   +                  S+  S +
Sbjct: 599  RTNVHAVGASNGQKETTAFDCIRQVES-SDDGVKVETDYDENASKEVILPHDESVPDSSS 657

Query: 621  QTTMKALKMGFTLPASCYATMAIRELLKTSTSVSFHKTLNQ 499
            + +  ALK+ FTLP+SCYATMAIRELLKTSTSV++ KTLNQ
Sbjct: 658  KDSHTALKLTFTLPSSCYATMAIRELLKTSTSVAYQKTLNQ 698


>ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Glycine max]
          Length = 687

 Score =  837 bits (2161), Expect = 0.0
 Identities = 437/698 (62%), Positives = 531/698 (76%), Gaps = 13/698 (1%)
 Frame = -1

Query: 2553 ISMKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVED 2374
            ++MKT EE +VGI C+IS   GFRG+LKQRYSDFIVNEVD DG V  L+SLDAP E  E+
Sbjct: 1    MAMKTAEEHEVGISCFISDLRGFRGILKQRYSDFIVNEVDRDGAVVQLSSLDAPLEEPEE 60

Query: 2373 SKVEK-ETEISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHR 2197
            ++    +T +S+ SQIESF+SL+ + DA  L+ FI++IN+G  +  SPIVLSPDS+KSHR
Sbjct: 61   NRTNTHDTVVSYASQIESFKSLAEEYDAILLEEFINKINAGGEDSVSPIVLSPDSDKSHR 120

Query: 2196 TAVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGG-NDKGTNKRKRKERGERPYDSRG 2020
             A+HNFFKENFKFLVTD V+GPD  SKCIRVRLNS   N+KG N +KRKER ++P+DSRG
Sbjct: 121  KAMHNFFKENFKFLVTDVVNGPDASSKCIRVRLNSAEPNNKGKNSKKRKERDDKPFDSRG 180

Query: 2019 FDDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVF 1840
             ++WPE VGKFLRFHLYKENKDT EALG+IG ML IQ +SFGFAGTKDKR+V+TQRVTV+
Sbjct: 181  SENWPENVGKFLRFHLYKENKDTHEALGVIGNMLSIQPKSFGFAGTKDKRAVTTQRVTVY 240

Query: 1839 KQQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANS 1660
            KQQA RLA+LN+RL GIK+G+FCYV E        GNRFTITLRG+VA S+D IK +A++
Sbjct: 241  KQQASRLASLNKRLFGIKLGDFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIKASADA 300

Query: 1659 LGKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVREYYK 1480
            LG+ GFINYFGLQRFGS S+PTHLIGAALLRGEWK AV+MILDPR+GE+ +I + R+YYK
Sbjct: 301  LGRHGFINYFGLQRFGSGSLPTHLIGAALLRGEWKLAVDMILDPRDGEKSAIAKARKYYK 360

Query: 1479 ESCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHA 1300
            ES D+ GT++QLPRYLVAERA+LQ L+  PGNYLQALK+IPRTLRM+YVHSYQSYLWNHA
Sbjct: 361  ESSDVVGTLKQLPRYLVAERAVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLWNHA 420

Query: 1299 ASVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGMELL 1120
            AS RVQK+G   V LGDLVYCK  S  K  E V +E  +D C   YD  ++DE+ G   +
Sbjct: 421  ASKRVQKYGTENVVLGDLVYCKENSTGKVTEFVGSEYAED-CRGRYDSNNEDEVSGE--I 477

Query: 1119 EGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTESA 940
              + NSVK + A+DL  G YTIDDV+LP+PGSRV YP N +A+VY DLAKKDGISLTES 
Sbjct: 478  HEEINSVKVIDAEDLNSGCYTIDDVILPMPGSRVKYPTNHIANVYEDLAKKDGISLTESV 537

Query: 939  HNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSKSF-----II 775
            HNV++FSIT ++G YRRVFQKPI+FEWELL Y+D +  L +TDLD I KSK       + 
Sbjct: 538  HNVEDFSITSITGCYRRVFQKPINFEWELLSYSDSSEQLVDTDLDKINKSKPMNTVKQMG 597

Query: 774  EENNSKTLSVDCKKQVEG------LQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTT 613
              N     + DC +++E       ++N    LG                 S+ GS +Q +
Sbjct: 598  AANGKNEEAFDCIRELESSDDIAKVENYSEILG--------EEVKLPHDESLIGSSSQDS 649

Query: 612  MKALKMGFTLPASCYATMAIRELLKTSTSVSFHKTLNQ 499
              ALK+ FTLPASCYATMAIRELLKTSTSV++HKTLNQ
Sbjct: 650  QIALKLSFTLPASCYATMAIRELLKTSTSVAYHKTLNQ 687