BLASTX nr result
ID: Sinomenium21_contig00022185
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00022185
(531 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004148032.1| PREDICTED: RNA-binding protein Musashi homol... 113 3e-23
ref|XP_007202098.1| hypothetical protein PRUPE_ppa007568mg [Prun... 111 9e-23
ref|XP_007047269.1| RNA-binding (RRM/RBD/RNP motifs) family prot... 110 2e-22
ref|XP_007047268.1| RNA-binding (RRM/RBD/RNP motifs) family prot... 110 2e-22
ref|XP_007047267.1| RNA-binding family protein isoform 2 [Theobr... 110 2e-22
ref|XP_007047266.1| RNA-binding family protein isoform 1 [Theobr... 110 2e-22
gb|EXB54400.1| Uncharacterized RNA-binding protein [Morus notabi... 109 5e-22
ref|XP_004288032.1| PREDICTED: heterogeneous nuclear ribonucleop... 109 5e-22
ref|XP_003638749.1| RNA-binding protein [Medicago truncatula] gi... 109 5e-22
ref|XP_006829965.1| hypothetical protein AMTR_s00127p00033470 [A... 108 6e-22
ref|XP_004509137.1| PREDICTED: heterogeneous nuclear ribonucleop... 108 6e-22
ref|XP_002523592.1| RNA-binding protein, putative [Ricinus commu... 108 8e-22
ref|XP_002866967.1| RNA recognition motif-containing protein [Ar... 108 1e-21
ref|XP_006411923.1| hypothetical protein EUTSA_v10025462mg [Eutr... 107 1e-21
ref|NP_568011.1| RNA recognition motif-containing protein [Arabi... 107 1e-21
ref|XP_006466598.1| PREDICTED: heterogeneous nuclear ribonucleop... 107 2e-21
ref|XP_007156799.1| hypothetical protein PHAVU_002G018500g [Phas... 107 2e-21
ref|XP_006425902.1| hypothetical protein CICLE_v10025943mg [Citr... 107 2e-21
ref|XP_006425901.1| hypothetical protein CICLE_v10025943mg [Citr... 107 2e-21
ref|XP_006590656.1| PREDICTED: heterogeneous nuclear ribonucleop... 107 2e-21
>ref|XP_004148032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cucumis
sativus] gi|449502733|ref|XP_004161727.1| PREDICTED:
RNA-binding protein Musashi homolog 1-like [Cucumis
sativus]
Length = 377
Score = 113 bits (282), Expect = 3e-23
Identities = 54/59 (91%), Positives = 57/59 (96%)
Frame = +3
Query: 354 MDRKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAKN 530
MDRKLVVLGIPW+VDTEGL+EYMSKFGELED IVMKERSTGRSRGFGYVTFA+ EDAKN
Sbjct: 1 MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKN 59
>ref|XP_007202098.1| hypothetical protein PRUPE_ppa007568mg [Prunus persica]
gi|462397629|gb|EMJ03297.1| hypothetical protein
PRUPE_ppa007568mg [Prunus persica]
Length = 363
Score = 111 bits (278), Expect = 9e-23
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +3
Query: 354 MDRKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAKN 530
MDRKLVVLGIPW++DTEGL+EYMSKFGELED IVMK+RSTGRSRGFGY TFAS EDAKN
Sbjct: 1 MDRKLVVLGIPWDIDTEGLREYMSKFGELEDCIVMKDRSTGRSRGFGYATFASAEDAKN 59
>ref|XP_007047269.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 4
[Theobroma cacao] gi|508699530|gb|EOX91426.1|
RNA-binding (RRM/RBD/RNP motifs) family protein isoform
4 [Theobroma cacao]
Length = 356
Score = 110 bits (275), Expect = 2e-22
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +3
Query: 354 MDRKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAKN 530
MDRKLVVLGIPW VDTEGL++YMSKFG+LED IVMKERSTGRSRGFGYVTFAS +DAKN
Sbjct: 1 MDRKLVVLGIPWEVDTEGLRKYMSKFGDLEDCIVMKERSTGRSRGFGYVTFASADDAKN 59
>ref|XP_007047268.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 3
[Theobroma cacao] gi|508699529|gb|EOX91425.1|
RNA-binding (RRM/RBD/RNP motifs) family protein isoform
3 [Theobroma cacao]
Length = 357
Score = 110 bits (275), Expect = 2e-22
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +3
Query: 354 MDRKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAKN 530
MDRKLVVLGIPW VDTEGL++YMSKFG+LED IVMKERSTGRSRGFGYVTFAS +DAKN
Sbjct: 1 MDRKLVVLGIPWEVDTEGLRKYMSKFGDLEDCIVMKERSTGRSRGFGYVTFASADDAKN 59
>ref|XP_007047267.1| RNA-binding family protein isoform 2 [Theobroma cacao]
gi|508699528|gb|EOX91424.1| RNA-binding family protein
isoform 2 [Theobroma cacao]
Length = 356
Score = 110 bits (275), Expect = 2e-22
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +3
Query: 354 MDRKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAKN 530
MDRKLVVLGIPW VDTEGL++YMSKFG+LED IVMKERSTGRSRGFGYVTFAS +DAKN
Sbjct: 1 MDRKLVVLGIPWEVDTEGLRKYMSKFGDLEDCIVMKERSTGRSRGFGYVTFASADDAKN 59
>ref|XP_007047266.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508699527|gb|EOX91423.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 390
Score = 110 bits (275), Expect = 2e-22
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +3
Query: 354 MDRKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAKN 530
MDRKLVVLGIPW VDTEGL++YMSKFG+LED IVMKERSTGRSRGFGYVTFAS +DAKN
Sbjct: 1 MDRKLVVLGIPWEVDTEGLRKYMSKFGDLEDCIVMKERSTGRSRGFGYVTFASADDAKN 59
>gb|EXB54400.1| Uncharacterized RNA-binding protein [Morus notabilis]
Length = 360
Score = 109 bits (272), Expect = 5e-22
Identities = 51/59 (86%), Positives = 57/59 (96%)
Frame = +3
Query: 354 MDRKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAKN 530
M+RKLVVLGIPW+VDT+GL++YM+KFGELED IVMKERSTGRSRGFGYVTFAS EDAKN
Sbjct: 1 MERKLVVLGIPWDVDTDGLRDYMTKFGELEDCIVMKERSTGRSRGFGYVTFASEEDAKN 59
>ref|XP_004288032.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Fragaria vesca subsp. vesca]
Length = 364
Score = 109 bits (272), Expect = 5e-22
Identities = 51/59 (86%), Positives = 56/59 (94%)
Frame = +3
Query: 354 MDRKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAKN 530
MDRKLVVLGIPW++DTEGL+EYM K+GELED IVMKERSTGRSRGFGYVTFAS EDAK+
Sbjct: 1 MDRKLVVLGIPWDIDTEGLREYMCKYGELEDCIVMKERSTGRSRGFGYVTFASAEDAKS 59
>ref|XP_003638749.1| RNA-binding protein [Medicago truncatula]
gi|355504684|gb|AES85887.1| RNA-binding protein
[Medicago truncatula]
Length = 371
Score = 109 bits (272), Expect = 5e-22
Identities = 52/57 (91%), Positives = 55/57 (96%)
Frame = +3
Query: 360 RKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAKN 530
RKLVVLGIPW+VDT+GLKEYMSKFGELED IVMKERSTGRSRGFGYVTFAS +DAKN
Sbjct: 4 RKLVVLGIPWHVDTDGLKEYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKN 60
>ref|XP_006829965.1| hypothetical protein AMTR_s00127p00033470 [Amborella trichopoda]
gi|548835604|gb|ERM97381.1| hypothetical protein
AMTR_s00127p00033470 [Amborella trichopoda]
Length = 413
Score = 108 bits (271), Expect = 6e-22
Identities = 51/59 (86%), Positives = 56/59 (94%)
Frame = +3
Query: 351 LMDRKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAK 527
+M+ KLVVLGIPW+VDTEGL++YMSKFGELED IVMKERSTGRSRGFGYVTFAS EDAK
Sbjct: 50 IMENKLVVLGIPWDVDTEGLRDYMSKFGELEDAIVMKERSTGRSRGFGYVTFASAEDAK 108
>ref|XP_004509137.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform
X1 [Cicer arietinum] gi|502152882|ref|XP_004509138.1|
PREDICTED: heterogeneous nuclear ribonucleoprotein
1-like isoform X2 [Cicer arietinum]
gi|502152886|ref|XP_004509139.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein 1-like isoform
X3 [Cicer arietinum] gi|502152889|ref|XP_004509140.1|
PREDICTED: heterogeneous nuclear ribonucleoprotein
1-like isoform X4 [Cicer arietinum]
Length = 366
Score = 108 bits (271), Expect = 6e-22
Identities = 52/57 (91%), Positives = 55/57 (96%)
Frame = +3
Query: 360 RKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAKN 530
RKLVVLGIPW+V+TEGLKEYMSKFGELED IVMKERSTGRSRGFGYVTFAS +DAKN
Sbjct: 4 RKLVVLGIPWDVETEGLKEYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKN 60
>ref|XP_002523592.1| RNA-binding protein, putative [Ricinus communis]
gi|223537154|gb|EEF38787.1| RNA-binding protein,
putative [Ricinus communis]
Length = 359
Score = 108 bits (270), Expect = 8e-22
Identities = 51/59 (86%), Positives = 56/59 (94%)
Frame = +3
Query: 354 MDRKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAKN 530
MDRKLVVLGIPW VDTEGL+EYM+KFGEL+D IVMKERS+GRSRGFGYVTFAS EDAK+
Sbjct: 1 MDRKLVVLGIPWEVDTEGLREYMTKFGELDDCIVMKERSSGRSRGFGYVTFASAEDAKS 59
>ref|XP_002866967.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297312803|gb|EFH43226.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 380
Score = 108 bits (269), Expect = 1e-21
Identities = 49/59 (83%), Positives = 58/59 (98%)
Frame = +3
Query: 354 MDRKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAKN 530
M+RKLVVLGIPW++D++GLK+YMSKFG+LED IVMK+RSTGRSRGFGYVTFAS+EDAKN
Sbjct: 1 MERKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASSEDAKN 59
>ref|XP_006411923.1| hypothetical protein EUTSA_v10025462mg [Eutrema salsugineum]
gi|557113093|gb|ESQ53376.1| hypothetical protein
EUTSA_v10025462mg [Eutrema salsugineum]
Length = 379
Score = 107 bits (268), Expect = 1e-21
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +3
Query: 354 MDRKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAKN 530
M+RKLVVLGIPW++D++GLK+YMSKFG+LED IVMK+RSTGRSRGFGYVTFAS EDAKN
Sbjct: 1 MERKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKN 59
>ref|NP_568011.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|238481137|ref|NP_001154290.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
gi|15081787|gb|AAK82548.1| AT4g36960/C7A10_400
[Arabidopsis thaliana] gi|23308345|gb|AAN18142.1|
At4g36960/C7A10_400 [Arabidopsis thaliana]
gi|332661324|gb|AEE86724.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
gi|332661325|gb|AEE86725.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 379
Score = 107 bits (268), Expect = 1e-21
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +3
Query: 354 MDRKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAKN 530
M+RKLVVLGIPW++D++GLK+YMSKFG+LED IVMK+RSTGRSRGFGYVTFAS EDAKN
Sbjct: 1 MERKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKN 59
>ref|XP_006466598.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Citrus
sinensis]
Length = 358
Score = 107 bits (267), Expect = 2e-21
Identities = 50/58 (86%), Positives = 56/58 (96%)
Frame = +3
Query: 354 MDRKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAK 527
M++KLVVLGIPW+VDT+GL+EYMSKFG+LED IVMKERSTGRSRGFGYVTFAS EDAK
Sbjct: 1 MEKKLVVLGIPWDVDTDGLREYMSKFGDLEDCIVMKERSTGRSRGFGYVTFASAEDAK 58
>ref|XP_007156799.1| hypothetical protein PHAVU_002G018500g [Phaseolus vulgaris]
gi|561030214|gb|ESW28793.1| hypothetical protein
PHAVU_002G018500g [Phaseolus vulgaris]
Length = 357
Score = 107 bits (267), Expect = 2e-21
Identities = 51/57 (89%), Positives = 55/57 (96%)
Frame = +3
Query: 360 RKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAKN 530
RKLVVLGIPW+VDTEGL+EYMSKFGELED IVMKERSTGRSRGFGYVTFAS +DAK+
Sbjct: 4 RKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKD 60
>ref|XP_006425902.1| hypothetical protein CICLE_v10025943mg [Citrus clementina]
gi|567866563|ref|XP_006425904.1| hypothetical protein
CICLE_v10025943mg [Citrus clementina]
gi|557527892|gb|ESR39142.1| hypothetical protein
CICLE_v10025943mg [Citrus clementina]
gi|557527894|gb|ESR39144.1| hypothetical protein
CICLE_v10025943mg [Citrus clementina]
Length = 358
Score = 107 bits (267), Expect = 2e-21
Identities = 50/58 (86%), Positives = 56/58 (96%)
Frame = +3
Query: 354 MDRKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAK 527
M++KLVVLGIPW+VDT+GL+EYMSKFG+LED IVMKERSTGRSRGFGYVTFAS EDAK
Sbjct: 1 MEKKLVVLGIPWDVDTDGLREYMSKFGDLEDCIVMKERSTGRSRGFGYVTFASAEDAK 58
>ref|XP_006425901.1| hypothetical protein CICLE_v10025943mg [Citrus clementina]
gi|567866561|ref|XP_006425903.1| hypothetical protein
CICLE_v10025943mg [Citrus clementina]
gi|557527891|gb|ESR39141.1| hypothetical protein
CICLE_v10025943mg [Citrus clementina]
gi|557527893|gb|ESR39143.1| hypothetical protein
CICLE_v10025943mg [Citrus clementina]
Length = 260
Score = 107 bits (267), Expect = 2e-21
Identities = 50/58 (86%), Positives = 56/58 (96%)
Frame = +3
Query: 354 MDRKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAK 527
M++KLVVLGIPW+VDT+GL+EYMSKFG+LED IVMKERSTGRSRGFGYVTFAS EDAK
Sbjct: 1 MEKKLVVLGIPWDVDTDGLREYMSKFGDLEDCIVMKERSTGRSRGFGYVTFASAEDAK 58
>ref|XP_006590656.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform
X1 [Glycine max] gi|571487434|ref|XP_006590657.1|
PREDICTED: heterogeneous nuclear ribonucleoprotein
1-like isoform X2 [Glycine max]
gi|571487436|ref|XP_006590658.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein 1-like isoform
X3 [Glycine max]
Length = 365
Score = 107 bits (266), Expect = 2e-21
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 360 RKLVVLGIPWNVDTEGLKEYMSKFGELEDVIVMKERSTGRSRGFGYVTFASTEDAK 527
RKLVVLGIPW+VDTEGL+EYMSKFGELED IVMKERSTGRSRGFGYVTFAS +DAK
Sbjct: 4 RKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAK 59