BLASTX nr result
ID: Sinomenium21_contig00021762
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00021762
(238 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264... 99 5e-19
ref|XP_007037997.1| Uncharacterized protein isoform 2, partial [... 94 2e-17
ref|XP_007037996.1| Uncharacterized protein isoform 1 [Theobroma... 94 2e-17
ref|XP_004244509.1| PREDICTED: mediator of RNA polymerase II tra... 91 1e-16
ref|XP_006357075.1| PREDICTED: mediator of RNA polymerase II tra... 91 2e-16
gb|EXB25243.1| hypothetical protein L484_010110 [Morus notabilis] 90 4e-16
ref|XP_006436855.1| hypothetical protein CICLE_v10032864mg [Citr... 90 4e-16
ref|XP_002864848.1| hypothetical protein ARALYDRAFT_496535 [Arab... 90 4e-16
ref|XP_006581863.1| PREDICTED: mediator of RNA polymerase II tra... 89 5e-16
ref|XP_003526951.1| PREDICTED: mediator of RNA polymerase II tra... 89 5e-16
dbj|BAD43384.1| unknown protein [Arabidopsis thaliana] 87 2e-15
ref|NP_568973.1| uncharacterized protein [Arabidopsis thaliana] ... 87 2e-15
gb|AAM62832.1| unknown [Arabidopsis thaliana] 87 2e-15
ref|XP_006281191.1| hypothetical protein CARUB_v10027226mg [Caps... 87 2e-15
ref|XP_002318134.1| hypothetical protein POPTR_0012s10100g [Popu... 86 4e-15
ref|XP_007137904.1| hypothetical protein PHAVU_009G165600g [Phas... 84 2e-14
gb|EYU29203.1| hypothetical protein MIMGU_mgv1a013715mg [Mimulus... 84 3e-14
ref|XP_003522437.2| PREDICTED: mediator of RNA polymerase II tra... 83 3e-14
ref|XP_002321708.2| hypothetical protein POPTR_0015s10970g [Popu... 82 1e-13
ref|XP_004291322.1| PREDICTED: mediator of RNA polymerase II tra... 82 1e-13
>ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264705 [Vitis vinifera]
gi|147789866|emb|CAN73869.1| hypothetical protein
VITISV_001275 [Vitis vinifera]
gi|297734439|emb|CBI15686.3| unnamed protein product
[Vitis vinifera]
Length = 174
Score = 99.4 bits (246), Expect = 5e-19
Identities = 54/86 (62%), Positives = 63/86 (73%), Gaps = 7/86 (8%)
Frame = +2
Query: 2 DGMKHLEDTIEAAFQILSSMNDELCNPALWS------TVAAPQSSNGVNGSTDA-FSHTS 160
+G KHLE+TIE+AFQILSSMNDELCNP LWS T A+ SS +NG + FSH
Sbjct: 15 EGQKHLEETIESAFQILSSMNDELCNPTLWSTPPPPATAASSHSSASLNGDASSDFSHHM 74
Query: 161 ADMGGGALDVARLRYKSAVSSLRSVL 238
GGGALD ARLRYKS+V+SLR+VL
Sbjct: 75 EIAGGGALDDARLRYKSSVASLRAVL 100
>ref|XP_007037997.1| Uncharacterized protein isoform 2, partial [Theobroma cacao]
gi|508775242|gb|EOY22498.1| Uncharacterized protein
isoform 2, partial [Theobroma cacao]
Length = 142
Score = 94.0 bits (232), Expect = 2e-17
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 26/105 (24%)
Frame = +2
Query: 2 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQSSNGVNGSTDAFSHTSA------ 163
+G+KHLE+TIEAAFQILSSMNDELCNPALWST+ P SSN S+ ++T+A
Sbjct: 25 EGLKHLEETIEAAFQILSSMNDELCNPALWSTI--PSSSNSTTASSTTTANTAAPNGPSS 82
Query: 164 --------------DMGG------GALDVARLRYKSAVSSLRSVL 238
+MGG GALD ARLRYK++V+SLR+VL
Sbjct: 83 LSNGDSASDGGHHLEMGGIGGSGNGALDEARLRYKNSVASLRAVL 127
>ref|XP_007037996.1| Uncharacterized protein isoform 1 [Theobroma cacao]
gi|508775241|gb|EOY22497.1| Uncharacterized protein
isoform 1 [Theobroma cacao]
Length = 198
Score = 94.0 bits (232), Expect = 2e-17
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 26/105 (24%)
Frame = +2
Query: 2 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQSSNGVNGSTDAFSHTSA------ 163
+G+KHLE+TIEAAFQILSSMNDELCNPALWST+ P SSN S+ ++T+A
Sbjct: 25 EGLKHLEETIEAAFQILSSMNDELCNPALWSTI--PSSSNSTTASSTTTANTAAPNGPSS 82
Query: 164 --------------DMGG------GALDVARLRYKSAVSSLRSVL 238
+MGG GALD ARLRYK++V+SLR+VL
Sbjct: 83 LSNGDSASDGGHHLEMGGIGGSGNGALDEARLRYKNSVASLRAVL 127
>ref|XP_004244509.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like [Solanum lycopersicum]
Length = 198
Score = 91.3 bits (225), Expect = 1e-16
Identities = 55/107 (51%), Positives = 68/107 (63%), Gaps = 28/107 (26%)
Frame = +2
Query: 2 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQSSNGV--------------NG-- 133
+G KHLEDTIEAA QILS+MNDELCNP+LWST+ +S+ V NG
Sbjct: 19 EGQKHLEDTIEAAHQILSAMNDELCNPSLWSTLNTAAASSAVAVAGGGVGASGVLSNGQQ 78
Query: 134 -------STDAFSHTSA-----DMGGGALDVARLRYKSAVSSLRSVL 238
S+D S +SA D+GGGALD +RLRYKS+++SLRSVL
Sbjct: 79 HHTNGDISSDTSSSSSASAQHLDIGGGALDESRLRYKSSIASLRSVL 125
>ref|XP_006357075.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like isoform X1 [Solanum tuberosum]
gi|565381437|ref|XP_006357076.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 30-like isoform
X2 [Solanum tuberosum]
Length = 198
Score = 90.9 bits (224), Expect = 2e-16
Identities = 57/107 (53%), Positives = 69/107 (64%), Gaps = 28/107 (26%)
Frame = +2
Query: 2 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTV-----------------AAPQSSNG-- 124
+G KHLEDTIEAA QILS+MNDELCNP+LWST+ A+ SNG
Sbjct: 19 EGQKHLEDTIEAAHQILSAMNDELCNPSLWSTLNTAASSASASAAGGGVGASAVLSNGQQ 78
Query: 125 --VNG--STDAFSHTSA-----DMGGGALDVARLRYKSAVSSLRSVL 238
NG S+D S +SA D+GGGALD +RLRYKS+++SLRSVL
Sbjct: 79 LHTNGDISSDTSSSSSASAQHLDIGGGALDESRLRYKSSIASLRSVL 125
>gb|EXB25243.1| hypothetical protein L484_010110 [Morus notabilis]
Length = 200
Score = 89.7 bits (221), Expect = 4e-16
Identities = 57/104 (54%), Positives = 66/104 (63%), Gaps = 25/104 (24%)
Frame = +2
Query: 2 DGMKHLEDTIEAAFQILSSMNDELCNPALWS---TVAAPQSSNG---------------V 127
+G KHLEDTIE+AFQILSSMNDELCNPALWS TVAA SS+ V
Sbjct: 23 EGQKHLEDTIESAFQILSSMNDELCNPALWSTTTTVAAATSSSSPSSAANGPSSHSNGLV 82
Query: 128 NGSTDAF-SHTSADMG------GGALDVARLRYKSAVSSLRSVL 238
NG A SH AD+G GGAL A+ RYK+AV+SLR++L
Sbjct: 83 NGDAAASDSHHHADLGGGGGAAGGALGEAQFRYKNAVASLRAIL 126
>ref|XP_006436855.1| hypothetical protein CICLE_v10032864mg [Citrus clementina]
gi|568880628|ref|XP_006493212.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 30-like [Citrus
sinensis] gi|557539051|gb|ESR50095.1| hypothetical
protein CICLE_v10032864mg [Citrus clementina]
Length = 183
Score = 89.7 bits (221), Expect = 4e-16
Identities = 50/87 (57%), Positives = 63/87 (72%), Gaps = 8/87 (9%)
Frame = +2
Query: 2 DGMKHLEDTIEAAFQILSSMNDELCNPALWS--TVAAPQSSNGV---NGSTDAFSH---T 157
+G KHLE+TIEAAFQILSSMNDELCNP LWS T +SNGV + ++DA +H +
Sbjct: 23 EGQKHLEETIEAAFQILSSMNDELCNPTLWSTTTTTTTSTSNGVVHADSTSDANNHHLDS 82
Query: 158 SADMGGGALDVARLRYKSAVSSLRSVL 238
S G ALD AR RYK++V++LR+VL
Sbjct: 83 SGGSGNSALDEARHRYKTSVAALRAVL 109
>ref|XP_002864848.1| hypothetical protein ARALYDRAFT_496535 [Arabidopsis lyrata subsp.
lyrata] gi|297310683|gb|EFH41107.1| hypothetical protein
ARALYDRAFT_496535 [Arabidopsis lyrata subsp. lyrata]
Length = 178
Score = 89.7 bits (221), Expect = 4e-16
Identities = 53/99 (53%), Positives = 63/99 (63%), Gaps = 20/99 (20%)
Frame = +2
Query: 2 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQS---SNGVNGST---------DA 145
+G KHLE+TIEAAFQI+S+MNDELCNP+LWST A P S + G NGS D
Sbjct: 9 EGEKHLEETIEAAFQIISAMNDELCNPSLWSTSATPSSAATATGSNGSALVSVDAAAIDG 68
Query: 146 FSHTSADMGGG--------ALDVARLRYKSAVSSLRSVL 238
SH S GGG LD A LRYK++V+SLR+VL
Sbjct: 69 TSHHSESGGGGGGGGSGNSVLDEASLRYKNSVTSLRAVL 107
>ref|XP_006581863.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like isoform X2 [Glycine max]
Length = 139
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 5/84 (5%)
Frame = +2
Query: 2 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQSSNGVNGSTDAFSH-----TSAD 166
+G K+LE+TIE AFQILSSMNDELCNP LWST + SS + +++ +H T+A
Sbjct: 15 EGQKYLEETIENAFQILSSMNDELCNPVLWSTSPSASSSPNADATSENSNHHADATTAAA 74
Query: 167 MGGGALDVARLRYKSAVSSLRSVL 238
GGGAL+ AR RYK AV++LR++L
Sbjct: 75 GGGGALEQARSRYKKAVAALRTIL 98
>ref|XP_003526951.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like isoform X1 [Glycine max]
Length = 168
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 5/84 (5%)
Frame = +2
Query: 2 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQSSNGVNGSTDAFSH-----TSAD 166
+G K+LE+TIE AFQILSSMNDELCNP LWST + SS + +++ +H T+A
Sbjct: 15 EGQKYLEETIENAFQILSSMNDELCNPVLWSTSPSASSSPNADATSENSNHHADATTAAA 74
Query: 167 MGGGALDVARLRYKSAVSSLRSVL 238
GGGAL+ AR RYK AV++LR++L
Sbjct: 75 GGGGALEQARSRYKKAVAALRTIL 98
>dbj|BAD43384.1| unknown protein [Arabidopsis thaliana]
Length = 184
Score = 87.4 bits (215), Expect = 2e-15
Identities = 52/99 (52%), Positives = 62/99 (62%), Gaps = 20/99 (20%)
Frame = +2
Query: 2 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQS---SNGVNGST---------DA 145
+G K LE+TIEAAFQI+S+MNDELCNP+LWST A P S + G NGS D
Sbjct: 15 EGEKQLEETIEAAFQIISAMNDELCNPSLWSTSATPSSAATTTGSNGSALVSADAAAIDG 74
Query: 146 FSHTSADMGGG--------ALDVARLRYKSAVSSLRSVL 238
SH S GGG LD A LRYK++V+SLR+VL
Sbjct: 75 TSHHSESAGGGGGEGSGNSVLDEASLRYKNSVTSLRAVL 113
>ref|NP_568973.1| uncharacterized protein [Arabidopsis thaliana]
gi|75171739|sp|Q9FMV4.1|MED30_ARATH RecName:
Full=Mediator of RNA polymerase II transcription subunit
30 gi|9758289|dbj|BAB08813.1| unnamed protein product
[Arabidopsis thaliana] gi|190886513|gb|ACE95179.1|
At1g17730 [Arabidopsis thaliana]
gi|332010374|gb|AED97757.1| uncharacterized protein
AT5G63480 [Arabidopsis thaliana]
Length = 189
Score = 87.4 bits (215), Expect = 2e-15
Identities = 52/99 (52%), Positives = 62/99 (62%), Gaps = 20/99 (20%)
Frame = +2
Query: 2 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQS---SNGVNGST---------DA 145
+G K LE+TIEAAFQI+S+MNDELCNP+LWST A P S + G NGS D
Sbjct: 20 EGEKQLEETIEAAFQIISAMNDELCNPSLWSTSATPSSAATTTGSNGSALVSADAAAIDG 79
Query: 146 FSHTSADMGGG--------ALDVARLRYKSAVSSLRSVL 238
SH S GGG LD A LRYK++V+SLR+VL
Sbjct: 80 TSHHSESAGGGGGGGSGNSVLDEASLRYKNSVTSLRAVL 118
>gb|AAM62832.1| unknown [Arabidopsis thaliana]
Length = 178
Score = 87.4 bits (215), Expect = 2e-15
Identities = 52/99 (52%), Positives = 62/99 (62%), Gaps = 20/99 (20%)
Frame = +2
Query: 2 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQS---SNGVNGST---------DA 145
+G K LE+TIEAAFQI+S+MNDELCNP+LWST A P S + G NGS D
Sbjct: 9 EGEKQLEETIEAAFQIISAMNDELCNPSLWSTSATPSSAATTTGSNGSALVSADAAAIDG 68
Query: 146 FSHTSADMGGG--------ALDVARLRYKSAVSSLRSVL 238
SH S GGG LD A LRYK++V+SLR+VL
Sbjct: 69 TSHHSESAGGGGGGGSGNSVLDEASLRYKNSVTSLRAVL 107
>ref|XP_006281191.1| hypothetical protein CARUB_v10027226mg [Capsella rubella]
gi|482549895|gb|EOA14089.1| hypothetical protein
CARUB_v10027226mg [Capsella rubella]
Length = 177
Score = 87.0 bits (214), Expect = 2e-15
Identities = 52/98 (53%), Positives = 63/98 (64%), Gaps = 19/98 (19%)
Frame = +2
Query: 2 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQS----SNGVNGST---------D 142
+G KHLE+TIEAAFQI+S+MNDELCNP+LWST A S + G NG+ D
Sbjct: 9 EGEKHLEETIEAAFQIISAMNDELCNPSLWSTSATASSAMATTTGSNGTALVSADAAAID 68
Query: 143 AFSHTSADMGGG------ALDVARLRYKSAVSSLRSVL 238
SH S GGG ALD A LRYK++V+SLR+VL
Sbjct: 69 ETSHHSESGGGGGGSGNSALDEASLRYKNSVTSLRAVL 106
>ref|XP_002318134.1| hypothetical protein POPTR_0012s10100g [Populus trichocarpa]
gi|118486707|gb|ABK95190.1| unknown [Populus
trichocarpa] gi|222858807|gb|EEE96354.1| hypothetical
protein POPTR_0012s10100g [Populus trichocarpa]
Length = 185
Score = 86.3 bits (212), Expect = 4e-15
Identities = 50/94 (53%), Positives = 61/94 (64%), Gaps = 15/94 (15%)
Frame = +2
Query: 2 DGMKHLEDTIEAAFQILSSMNDELCNPALW-------STVAAP-QSSNGVNGSTDAFSHT 157
+G KHLE+TI+AA+QILSSMNDELCNP LW STV +P SSN NG +A
Sbjct: 25 EGQKHLEETIQAAYQILSSMNDELCNPTLWSTTSTSTSTVTSPITSSNAQNGDANAAVSD 84
Query: 158 S-------ADMGGGALDVARLRYKSAVSSLRSVL 238
S +G GALD AR RYK++V++LR VL
Sbjct: 85 STLELNGGGGVGNGALDEARFRYKNSVAALRDVL 118
>ref|XP_007137904.1| hypothetical protein PHAVU_009G165600g [Phaseolus vulgaris]
gi|561010991|gb|ESW09898.1| hypothetical protein
PHAVU_009G165600g [Phaseolus vulgaris]
Length = 181
Score = 84.3 bits (207), Expect = 2e-14
Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 11/90 (12%)
Frame = +2
Query: 2 DGMKHLEDTIEAAFQILSSMNDELCNPALWS-----TVAAPQSSNGVNGSTDAFSHTSAD 166
+G K+LE+TIE AFQILSSMNDELCNP LWS T A+P + + ST S+ +D
Sbjct: 22 EGQKYLEETIEFAFQILSSMNDELCNPVLWSTSPSATSASPNAPSATADSTSDNSNLHSD 81
Query: 167 M------GGGALDVARLRYKSAVSSLRSVL 238
GGAL+ ARLRYK+AV++LR++L
Sbjct: 82 SATVSAGAGGALEEARLRYKNAVAALRTIL 111
>gb|EYU29203.1| hypothetical protein MIMGU_mgv1a013715mg [Mimulus guttatus]
Length = 212
Score = 83.6 bits (205), Expect = 3e-14
Identities = 51/112 (45%), Positives = 62/112 (55%), Gaps = 33/112 (29%)
Frame = +2
Query: 2 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTV---------------AAPQSSNGVNGS 136
+G HLE+TI+AAF ILS+MNDELCNP+LWST A+ NG +
Sbjct: 28 EGQNHLEETIDAAFLILSAMNDELCNPSLWSTTSTAANPSTTHLGGGGASASVGNGHQLN 87
Query: 137 TDAFS------------------HTSADMGGGALDVARLRYKSAVSSLRSVL 238
D S H S D+GGGALD ARL+YKS+V+SLRSVL
Sbjct: 88 GDVLSDSSSASSSASASQSHPQNHNSFDIGGGALDEARLQYKSSVASLRSVL 139
>ref|XP_003522437.2| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like [Glycine max]
Length = 174
Score = 83.2 bits (204), Expect = 3e-14
Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 5/84 (5%)
Frame = +2
Query: 2 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQSSNGVNGSTDAFSH-----TSAD 166
+G ++LE+TIE AFQILSSMNDELCNP LWST +P +S + ++D +H ++
Sbjct: 23 EGQEYLEETIENAFQILSSMNDELCNPVLWST--SPSTSPNADATSDNSNHHADASAASA 80
Query: 167 MGGGALDVARLRYKSAVSSLRSVL 238
GGAL+ AR RYK AV++LR++L
Sbjct: 81 AAGGALEEARARYKKAVTALRTIL 104
>ref|XP_002321708.2| hypothetical protein POPTR_0015s10970g [Populus trichocarpa]
gi|550322461|gb|EEF05835.2| hypothetical protein
POPTR_0015s10970g [Populus trichocarpa]
Length = 194
Score = 81.6 bits (200), Expect = 1e-13
Identities = 48/103 (46%), Positives = 60/103 (58%), Gaps = 24/103 (23%)
Frame = +2
Query: 2 DGMKHLEDTIEAAFQILSSMNDELCNPALWST-----------VAAPQSSNG-----VNG 133
+G KHLE+TI+A +QILSSMNDELCNP LWST + + + NG VNG
Sbjct: 25 EGQKHLEETIQAGYQILSSMNDELCNPTLWSTTSTATTAVTSPITSKNAQNGAVVITVNG 84
Query: 134 --------STDAFSHTSADMGGGALDVARLRYKSAVSSLRSVL 238
ST S +G GALD AR RYK++V++LR VL
Sbjct: 85 DANAAVSDSTHELSGGGGGVGNGALDEARFRYKNSVAALRDVL 127
>ref|XP_004291322.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like [Fragaria vesca subsp. vesca]
Length = 179
Score = 81.6 bits (200), Expect = 1e-13
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 13/91 (14%)
Frame = +2
Query: 5 GMKHLEDTIEAAFQILSSMNDELCNPALWSTVAA------PQSSNGV-------NGSTDA 145
G KHLE+TI++AFQILSSMNDELCNP LW T ++ SNGV + +T+
Sbjct: 23 GQKHLEETIQSAFQILSSMNDELCNPLLWPTDSSAVGNGHSSLSNGVVHSDSSSSENTNT 82
Query: 146 FSHTSADMGGGALDVARLRYKSAVSSLRSVL 238
+H + GGAL+ AR RYK++V++LR+VL
Sbjct: 83 QNHGDSSGAGGALEEARFRYKNSVTALRAVL 113