BLASTX nr result

ID: Sinomenium21_contig00021718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00021718
         (363 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65773.1| hypothetical protein VITISV_030410 [Vitis vinifera]    84   2e-14
ref|XP_007027530.1| RING-H2 finger protein ATL3C, putative [Theo...    71   1e-10
gb|EYU41576.1| hypothetical protein MIMGU_mgv1a023071mg [Mimulus...    63   4e-08
ref|XP_002519430.1| RING-H2 finger protein ATL3C, putative [Rici...    61   2e-07
ref|XP_006428386.1| hypothetical protein CICLE_v10013424mg [Citr...    59   7e-07

>emb|CAN65773.1| hypothetical protein VITISV_030410 [Vitis vinifera]
          Length = 269

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 45/90 (50%), Positives = 63/90 (70%), Gaps = 3/90 (3%)
 Frame = -1

Query: 261 VFTPLMISMVGIACTALVLVLYHYVLTRYCVR---GDNTMISQPDAVQAIEIEKKNVIET 91
           +FTPL+ISMVGI  T+LV+V+YH V+ +YC+R       ++S P    +  ++ K ++ET
Sbjct: 14  IFTPLLISMVGILGTSLVIVVYHLVIVKYCLRRQADPRPLLSAPRXRLSTGVDAK-ILET 72

Query: 90  IPAVAYSKKQDGSLLGVDQSECAVCLGELE 1
           IP ++YSKK+ G L   DQSECAVCL ELE
Sbjct: 73  IPILSYSKKK-GLLFHADQSECAVCLAELE 101


>ref|XP_007027530.1| RING-H2 finger protein ATL3C, putative [Theobroma cacao]
           gi|508716135|gb|EOY08032.1| RING-H2 finger protein
           ATL3C, putative [Theobroma cacao]
          Length = 283

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
 Frame = -1

Query: 300 METAKPQLQSSQLVFTPLMISMVGIACTALVLVLYHYVLTRYCVR-----GDNTMISQPD 136
           M+      Q S    TPLMIS+ G+  + L +V YH +L +YCVR       N  I   D
Sbjct: 1   MDPGNSVTQPSGSFLTPLMISLAGVVASTLAIVAYHLLLVKYCVRRADEEARNPSIPTQD 60

Query: 135 AVQAIEIEKKNVIETIPAVAYSKKQDGSLLGVDQSECAVCLGELE 1
              A  +E K ++ETIP +++S+++       DQSEC VCLGELE
Sbjct: 61  EGFATGVEHK-ILETIPILSFSREKVKE-FRTDQSECVVCLGELE 103


>gb|EYU41576.1| hypothetical protein MIMGU_mgv1a023071mg [Mimulus guttatus]
          Length = 292

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/104 (32%), Positives = 60/104 (57%), Gaps = 7/104 (6%)
 Frame = -1

Query: 294 TAKPQLQSSQLVFTPLMISMVGIACTALVLVLYHYVLTRYCV--RGDNTMISQPDAVQ-- 127
           T    + +S  +++PL+ISM+GI  T + ++ YH  L +YC+  R  +T   + +  Q  
Sbjct: 17  TTTTTIDNSLSIYSPLLISMLGIIGTCIAIIAYHLFLVQYCISTRRRSTAPEEEEEAQLP 76

Query: 126 ---AIEIEKKNVIETIPAVAYSKKQDGSLLGVDQSECAVCLGEL 4
               ++++   +++TIP + Y+  + G+  G DQ EC VCLGEL
Sbjct: 77  HPAGVDVK---LLQTIPILTYAAVKGGA--GADQDECVVCLGEL 115


>ref|XP_002519430.1| RING-H2 finger protein ATL3C, putative [Ricinus communis]
           gi|223541293|gb|EEF42844.1| RING-H2 finger protein
           ATL3C, putative [Ricinus communis]
          Length = 329

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
 Frame = -1

Query: 300 METAKPQLQSSQLVFTPLMISMVGIACTALVLVLYHYVLTRYCVRGDNTMISQPDAVQAI 121
           M+   P  Q   L  +PL++S+  + C ++++  YH +L R+C+R   ++ +       +
Sbjct: 1   MDPLGPPSQPQGLFVSPLLVSLSIVGCVSMIIAAYHLLLVRFCIRRRRSITTNDSFTIPV 60

Query: 120 EIEK----KNVIETIPAVAYSKKQDGSLLGVDQSECAVCLGELE 1
           +  +    ++V++ IP + YSK      +  DQ+EC +CLGELE
Sbjct: 61  QEMRTGVEEDVLKAIPILLYSK------VDHDQTECVICLGELE 98


>ref|XP_006428386.1| hypothetical protein CICLE_v10013424mg [Citrus clementina]
           gi|557530443|gb|ESR41626.1| hypothetical protein
           CICLE_v10013424mg [Citrus clementina]
          Length = 297

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 42/104 (40%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
 Frame = -1

Query: 291 AKPQLQSSQLVFTPLMISMVGIACTALVLVLYH----YVLTRYCVRGDNTMISQPDAVQ- 127
           + P   S       L+IS+ GI    L +V YH    Y++ R  +R +  +IS       
Sbjct: 6   SSPSENSGGSFLPHLLISICGITAATLAIVAYHLIVKYLMMRRRLRSERLIISGSSQTLH 65

Query: 126 --AIEIEKKNVIETIPAVAYSKKQDGSLLGVDQSECAVCLGELE 1
             A  IE+K V+ TIP +AYS K D  L  VDQSEC +CLGELE
Sbjct: 66  QFAKGIEEK-VLLTIPILAYSAK-DCKLFRVDQSECVICLGELE 107


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