BLASTX nr result

ID: Sinomenium21_contig00021711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00021711
         (675 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632423.1| PREDICTED: uncharacterized basic helix-loop-...    67   5e-09
emb|CBI37092.3| unnamed protein product [Vitis vinifera]               67   5e-09
ref|XP_002532375.1| basic helix-loop-helix-containing protein, p...    60   6e-07

>ref|XP_003632423.1| PREDICTED: uncharacterized basic helix-loop-helix protein
           At1g06150-like [Vitis vinifera]
          Length = 749

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 38/102 (37%), Positives = 61/102 (59%)
 Frame = +2

Query: 2   LVTHIKDIFCALRNSSMEFVSNPLKYSMHSSLNMTEVSSQHSGLDNFNDSPRCSDKFISD 181
           LV+ IKD+F AL++SS+ ++ +P++ SM SSL M+++S++ S  D   DS    DK I  
Sbjct: 158 LVSRIKDVFFALQDSSVAYIPHPIQCSMKSSLAMSDISTRGSASDIVPDSLFNLDKGIHK 217

Query: 182 KSSHIQSCLFPSLGTSNELSHNVYLLPHPHQNKPFEMLQHSG 307
           +  ++ S +FP  G  N+ S  ++ LP  HQN+   M    G
Sbjct: 218 ERPNVWSPMFPIFGKHNDSSF-IFQLPAIHQNRAVNMFNKDG 258



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
 Frame = +2

Query: 245 NVYLLPHPHQNKPFEMLQHSGLENFN-------DSPHCSDKSISNKRSHIQSCLFPSLGT 403
           +V  +PHP Q      L  S +           DS    DK I  +R ++ S +FP  G 
Sbjct: 173 SVAYIPHPIQCSMKSSLAMSDISTRGSASDIVPDSLFNLDKGIHKERPNVWSPMFPIFGK 232

Query: 404 SNELSHSVYLLPHLHQSKPFEVFNEQVILESVKVGDGESTKLHKQKLAIHNLERERELQM 583
            N+ S  ++ LP +HQ++   +FN+   LE       ESTK  + +     LE ++++QM
Sbjct: 233 HNDSSF-IFQLPAIHQNRAVNMFNKDGGLELSSSQSDESTKFLQPRSENFVLEGQKQVQM 291

Query: 584 NLFDKDKCGEENGNWSDRLVGLKHNDVS 667
            L    K  EE   W D  V  +HND S
Sbjct: 292 KLISNTK-REEASGWRDADVSSEHNDTS 318


>emb|CBI37092.3| unnamed protein product [Vitis vinifera]
          Length = 774

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 38/102 (37%), Positives = 61/102 (59%)
 Frame = +2

Query: 2   LVTHIKDIFCALRNSSMEFVSNPLKYSMHSSLNMTEVSSQHSGLDNFNDSPRCSDKFISD 181
           LV+ IKD+F AL++SS+ ++ +P++ SM SSL M+++S++ S  D   DS    DK I  
Sbjct: 183 LVSRIKDVFFALQDSSVAYIPHPIQCSMKSSLAMSDISTRGSASDIVPDSLFNLDKGIHK 242

Query: 182 KSSHIQSCLFPSLGTSNELSHNVYLLPHPHQNKPFEMLQHSG 307
           +  ++ S +FP  G  N+ S  ++ LP  HQN+   M    G
Sbjct: 243 ERPNVWSPMFPIFGKHNDSSF-IFQLPAIHQNRAVNMFNKDG 283



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
 Frame = +2

Query: 245 NVYLLPHPHQNKPFEMLQHSGLENFN-------DSPHCSDKSISNKRSHIQSCLFPSLGT 403
           +V  +PHP Q      L  S +           DS    DK I  +R ++ S +FP  G 
Sbjct: 198 SVAYIPHPIQCSMKSSLAMSDISTRGSASDIVPDSLFNLDKGIHKERPNVWSPMFPIFGK 257

Query: 404 SNELSHSVYLLPHLHQSKPFEVFNEQVILESVKVGDGESTKLHKQKLAIHNLERERELQM 583
            N+ S  ++ LP +HQ++   +FN+   LE       ESTK  + +     LE ++++QM
Sbjct: 258 HNDSSF-IFQLPAIHQNRAVNMFNKDGGLELSSSQSDESTKFLQPRSENFVLEGQKQVQM 316

Query: 584 NLFDKDKCGEENGNWSDRLVGLKHNDVS 667
            L    K  EE   W D  V  +HND S
Sbjct: 317 KLISNTK-REEASGWRDADVSSEHNDTS 343


>ref|XP_002532375.1| basic helix-loop-helix-containing protein, putative [Ricinus
           communis] gi|223527931|gb|EEF30018.1| basic
           helix-loop-helix-containing protein, putative [Ricinus
           communis]
          Length = 749

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 3/127 (2%)
 Frame = +2

Query: 2   LVTHIKDIFCALRNSSMEFVSNPLKYSMHSSLNMTEVSSQHSGLDNFN---DSPRCSDKF 172
           LV HIKD+F +L++SS+E +S PL+YSM +SL + +V +Q   LD+ +       C+   
Sbjct: 158 LVNHIKDVFSSLQDSSVEQISIPLQYSMKTSLYLPDVPTQ--SLDSESVVIPDNLCNLDK 215

Query: 173 ISDKSSHIQSCLFPSLGTSNELSHNVYLLPHPHQNKPFEMLQHSGLENFNDSPHCSDKSI 352
            +DK  + QS +FP L   ++ S+  Y LP  HQ    E++   G    +   + S   +
Sbjct: 216 AADKGPYNQSTMFPYLQKQSDDSY-FYSLPGIHQKTAVELVNKYGGGGLSLPVNISSVKL 274

Query: 353 SNKRSHI 373
              RS+I
Sbjct: 275 LQPRSNI 281


Top