BLASTX nr result
ID: Sinomenium21_contig00021582
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00021582
(327 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006342200.1| PREDICTED: chlorophyll a-b binding protein o... 86 5e-15
ref|XP_004238472.1| PREDICTED: chlorophyll a-b binding protein o... 86 5e-15
ref|XP_006490397.1| PREDICTED: chlorophyll a-b binding protein 1... 85 9e-15
ref|XP_006490396.1| PREDICTED: chlorophyll a-b binding protein 1... 85 9e-15
ref|XP_006490395.1| PREDICTED: chlorophyll a-b binding protein 1... 85 9e-15
ref|XP_002510744.1| chlorophyll A/B binding protein, putative [R... 84 2e-14
ref|XP_007028794.1| Light-harvesting complex II protein Lhcb7 [T... 84 3e-14
ref|XP_007209349.1| hypothetical protein PRUPE_ppa008546mg [Prun... 84 3e-14
ref|XP_002307004.1| chlorophyll A-B binding family protein [Popu... 83 4e-14
gb|AHM26642.1| LHCII a-b binding protein [Pyrus x bretschneideri] 82 6e-14
ref|XP_002887646.1| chlorophyll A-B binding family protein [Arab... 82 6e-14
ref|XP_006302513.1| hypothetical protein CARUB_v10020611mg, part... 82 1e-13
ref|NP_177783.1| chlorophyll A-B binding family protein [Arabido... 82 1e-13
ref|XP_003577951.1| PREDICTED: chlorophyll a-b binding protein 1... 81 1e-13
gb|EXB56249.1| Chlorophyll a-b binding protein of LHCII type III... 81 2e-13
ref|XP_006390178.1| hypothetical protein EUTSA_v10018862mg [Eutr... 81 2e-13
ref|XP_006390176.1| hypothetical protein EUTSA_v10018862mg [Eutr... 81 2e-13
ref|XP_002459987.1| hypothetical protein SORBIDRAFT_02g020290 [S... 80 2e-13
ref|XP_006660507.1| PREDICTED: chlorophyll a-b binding protein E... 80 3e-13
ref|NP_001062801.1| Os09g0296800 [Oryza sativa Japonica Group] g... 80 3e-13
>ref|XP_006342200.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Solanum tuberosum]
Length = 318
Score = 85.9 bits (211), Expect = 5e-15
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLAFLKSM 193
GRLAMVAWLGFY+QAALTGKGPVQNL+EHISDP HNNLL+ LKS+
Sbjct: 274 GRLAMVAWLGFYVQAALTGKGPVQNLLEHISDPFHNNLLSILKSL 318
>ref|XP_004238472.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Solanum lycopersicum]
Length = 318
Score = 85.9 bits (211), Expect = 5e-15
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLAFLKSM 193
GRLAMVAWLGFY+QAALTGKGPVQNL+EHISDP HNNLL+ LKS+
Sbjct: 274 GRLAMVAWLGFYVQAALTGKGPVQNLLEHISDPFHNNLLSILKSL 318
>ref|XP_006490397.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
isoform X3 [Citrus sinensis]
Length = 300
Score = 85.1 bits (209), Expect = 9e-15
Identities = 38/45 (84%), Positives = 43/45 (95%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLAFLKSM 193
GRLAMVAWLGFY+QAA TGKGPVQNL++HISDPLHNNLL+ +KSM
Sbjct: 206 GRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNNLLSMVKSM 250
>ref|XP_006490396.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
isoform X2 [Citrus sinensis]
Length = 338
Score = 85.1 bits (209), Expect = 9e-15
Identities = 38/45 (84%), Positives = 43/45 (95%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLAFLKSM 193
GRLAMVAWLGFY+QAA TGKGPVQNL++HISDPLHNNLL+ +KSM
Sbjct: 294 GRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNNLLSMVKSM 338
>ref|XP_006490395.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
isoform X1 [Citrus sinensis]
Length = 388
Score = 85.1 bits (209), Expect = 9e-15
Identities = 38/45 (84%), Positives = 43/45 (95%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLAFLKSM 193
GRLAMVAWLGFY+QAA TGKGPVQNL++HISDPLHNNLL+ +KSM
Sbjct: 294 GRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNNLLSMVKSM 338
>ref|XP_002510744.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223551445|gb|EEF52931.1| chlorophyll A/B binding
protein, putative [Ricinus communis]
Length = 329
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/45 (88%), Positives = 40/45 (88%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLAFLKSM 193
GRLAMVAWLGFY QAALTGKGPVQNLVEHISDP HNNLL LK M
Sbjct: 285 GRLAMVAWLGFYAQAALTGKGPVQNLVEHISDPFHNNLLCVLKFM 329
>ref|XP_007028794.1| Light-harvesting complex II protein Lhcb7 [Theobroma cacao]
gi|508717399|gb|EOY09296.1| Light-harvesting complex II
protein Lhcb7 [Theobroma cacao]
Length = 362
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLAFLKSM 193
GRLAMVAWLGFY QAALTGKGPVQNL+EH+SDP HNNL + LKSM
Sbjct: 318 GRLAMVAWLGFYSQAALTGKGPVQNLLEHLSDPFHNNLFSILKSM 362
>ref|XP_007209349.1| hypothetical protein PRUPE_ppa008546mg [Prunus persica]
gi|462405084|gb|EMJ10548.1| hypothetical protein
PRUPE_ppa008546mg [Prunus persica]
Length = 327
Score = 83.6 bits (205), Expect = 3e-14
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLAFLKSM 193
GRLAMVAWLGFY QAALTGKGPVQNL+EHISDPLHNN+L+ LK M
Sbjct: 283 GRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPLHNNVLSVLKFM 327
>ref|XP_002307004.1| chlorophyll A-B binding family protein [Populus trichocarpa]
gi|222856453|gb|EEE94000.1| chlorophyll A-B binding
family protein [Populus trichocarpa]
Length = 338
Score = 83.2 bits (204), Expect = 4e-14
Identities = 38/43 (88%), Positives = 41/43 (95%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLAFLK 199
GRLAMVAWLGFY+QAALTGKGPV+NLVEHISDPLHNNL + LK
Sbjct: 294 GRLAMVAWLGFYIQAALTGKGPVENLVEHISDPLHNNLFSTLK 336
>gb|AHM26642.1| LHCII a-b binding protein [Pyrus x bretschneideri]
Length = 347
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/45 (84%), Positives = 40/45 (88%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLAFLKSM 193
GRLAMVAWLGFY QAALTGKGPV NL+EHISDPLHNN+ LKSM
Sbjct: 303 GRLAMVAWLGFYSQAALTGKGPVHNLLEHISDPLHNNVFTLLKSM 347
>ref|XP_002887646.1| chlorophyll A-B binding family protein [Arabidopsis lyrata subsp.
lyrata] gi|297333487|gb|EFH63905.1| chlorophyll A-B
binding family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 330
Score = 82.4 bits (202), Expect = 6e-14
Identities = 37/44 (84%), Positives = 41/44 (93%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLAFLKS 196
GRLAMVAWLGFY QAA TGKGPVQNLV+H+SDPLHNNLLA L++
Sbjct: 287 GRLAMVAWLGFYAQAAFTGKGPVQNLVDHVSDPLHNNLLAMLQT 330
>ref|XP_006302513.1| hypothetical protein CARUB_v10020611mg, partial [Capsella rubella]
gi|482571223|gb|EOA35411.1| hypothetical protein
CARUB_v10020611mg, partial [Capsella rubella]
Length = 337
Score = 81.6 bits (200), Expect = 1e-13
Identities = 36/43 (83%), Positives = 40/43 (93%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLAFLK 199
GRLAMVAWLGFY QAA TGKGP+QNLV+H+SDPLHNNLLA L+
Sbjct: 294 GRLAMVAWLGFYAQAAFTGKGPIQNLVDHVSDPLHNNLLAMLQ 336
>ref|NP_177783.1| chlorophyll A-B binding family protein [Arabidopsis thaliana]
gi|12323973|gb|AAG51944.1|AC015450_5 putative
chlorophyll A-B binding protein; 65434-67056
[Arabidopsis thaliana] gi|332197739|gb|AEE35860.1|
chlorophyll A-B binding family protein [Arabidopsis
thaliana]
Length = 327
Score = 81.6 bits (200), Expect = 1e-13
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLAFLKS 196
GRLAMVAWLGFY QAA TGKGPVQNLV+H+SDPLHNNL+A L++
Sbjct: 284 GRLAMVAWLGFYAQAAFTGKGPVQNLVDHVSDPLHNNLIAMLQT 327
>ref|XP_003577951.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
[Brachypodium distachyon]
Length = 318
Score = 81.3 bits (199), Expect = 1e-13
Identities = 36/40 (90%), Positives = 40/40 (100%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLA 208
GRLAMVAWLGFYLQAA+TGKGPVQNLVEH+SDPLHNN+L+
Sbjct: 276 GRLAMVAWLGFYLQAAVTGKGPVQNLVEHLSDPLHNNILS 315
>gb|EXB56249.1| Chlorophyll a-b binding protein of LHCII type III [Morus notabilis]
Length = 289
Score = 80.9 bits (198), Expect = 2e-13
Identities = 35/42 (83%), Positives = 40/42 (95%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLAFL 202
GRLAMVAWLGFY QAALTGKGP+QNL++H+SDPLHNNLL+ L
Sbjct: 246 GRLAMVAWLGFYSQAALTGKGPIQNLIDHVSDPLHNNLLSML 287
>ref|XP_006390178.1| hypothetical protein EUTSA_v10018862mg [Eutrema salsugineum]
gi|557086612|gb|ESQ27464.1| hypothetical protein
EUTSA_v10018862mg [Eutrema salsugineum]
Length = 326
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLAFL 202
GRLAMVAWLGFY QAA TGKGPVQNLV+H+SDPLHNNLLA L
Sbjct: 283 GRLAMVAWLGFYAQAAFTGKGPVQNLVDHVSDPLHNNLLATL 324
>ref|XP_006390176.1| hypothetical protein EUTSA_v10018862mg [Eutrema salsugineum]
gi|567120619|ref|XP_006390177.1| hypothetical protein
EUTSA_v10018862mg [Eutrema salsugineum]
gi|557086610|gb|ESQ27462.1| hypothetical protein
EUTSA_v10018862mg [Eutrema salsugineum]
gi|557086611|gb|ESQ27463.1| hypothetical protein
EUTSA_v10018862mg [Eutrema salsugineum]
Length = 241
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLAFL 202
GRLAMVAWLGFY QAA TGKGPVQNLV+H+SDPLHNNLLA L
Sbjct: 198 GRLAMVAWLGFYAQAAFTGKGPVQNLVDHVSDPLHNNLLATL 239
>ref|XP_002459987.1| hypothetical protein SORBIDRAFT_02g020290 [Sorghum bicolor]
gi|241923364|gb|EER96508.1| hypothetical protein
SORBIDRAFT_02g020290 [Sorghum bicolor]
Length = 314
Score = 80.5 bits (197), Expect = 2e-13
Identities = 35/40 (87%), Positives = 40/40 (100%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLA 208
GRLAMVAWLGFY+QAA+TGKGPVQNLVEH+SDPLHNN+L+
Sbjct: 272 GRLAMVAWLGFYIQAAVTGKGPVQNLVEHLSDPLHNNILS 311
>ref|XP_006660507.1| PREDICTED: chlorophyll a-b binding protein E, chloroplastic-like
[Oryza brachyantha]
Length = 164
Score = 80.1 bits (196), Expect = 3e-13
Identities = 34/40 (85%), Positives = 40/40 (100%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLA 208
GRLAMVAWLGFY+QAA+TGKGP+QNLVEH+SDPLHNN+L+
Sbjct: 122 GRLAMVAWLGFYIQAAVTGKGPIQNLVEHLSDPLHNNILS 161
>ref|NP_001062801.1| Os09g0296800 [Oryza sativa Japonica Group]
gi|50725078|dbj|BAD33211.1| putative chlorophyll
a/b-binding protein [Oryza sativa Japonica Group]
gi|113631034|dbj|BAF24715.1| Os09g0296800 [Oryza sativa
Japonica Group]
Length = 321
Score = 80.1 bits (196), Expect = 3e-13
Identities = 34/40 (85%), Positives = 40/40 (100%)
Frame = -1
Query: 327 GRLAMVAWLGFYLQAALTGKGPVQNLVEHISDPLHNNLLA 208
GRLAMVAWLGFY+QAA+TGKGP+QNLVEH+SDPLHNN+L+
Sbjct: 279 GRLAMVAWLGFYIQAAVTGKGPIQNLVEHLSDPLHNNILS 318