BLASTX nr result
ID: Sinomenium21_contig00021578
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00021578
(780 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003599571.1| Photosystem I assembly protein Ycf3 [Medicag... 108 5e-23
ref|XP_003620942.1| Photosystem I assembly protein Ycf3 [Medicag... 108 2e-22
ref|XP_003605620.1| Photosystem I assembly protein Ycf3 [Medicag... 105 6e-22
ref|XP_006841200.1| hypothetical protein AMTR_s00334p00015220 [A... 108 2e-21
ref|YP_006503792.1| photosystem I assembly protein Ycf3 (chlorop... 108 3e-21
ref|YP_008963481.1| hypothetical chloroplast RF34 (chloroplast) ... 105 1e-20
gb|AFK81300.1| hypothetical chloroplast RF34 [Camellia sinensis ... 105 1e-20
gb|AGW04976.1| photosystem I assembly protein [Vincetoxicum ross... 105 1e-20
gb|AGW04519.1| photosystem I assembly protein [Eustegia minuta] 105 1e-20
ref|YP_008592489.1| photosystem I assembly protein Ycf3 (chlorop... 105 1e-20
gb|AGQ50350.1| hypothetical chloroplast RF34 (chloroplast) [Rume... 105 1e-20
ref|YP_007890374.1| hypothetical chloroplast RF34 (chloroplast) ... 105 1e-20
ref|YP_008578540.1| photosystem I assembly protein (chloroplast)... 105 1e-20
gb|ADD30872.1| putative RF3 protein [Heuchera sanguinea] 105 1e-20
gb|ADD30856.1| putative RF3 protein [Dillenia indica] 105 1e-20
ref|YP_004935667.1| ycf3 gene product (chloroplast) [Sesamum ind... 105 1e-20
ref|YP_001936518.2| photosystem I assembly protein ycf3 [Fagopyr... 105 1e-20
gb|ABY79733.1| photosystem I assembly protein ycf3 [Fagopyrum es... 105 1e-20
ref|YP_001837361.1| photosystem I assembly protein Ycf3 [Guizoti... 105 1e-20
ref|YP_778493.1| photosystem I assembly protein Ycf3 [Jasminum n... 105 1e-20
>ref|XP_003599571.1| Photosystem I assembly protein Ycf3 [Medicago truncatula]
gi|355488619|gb|AES69822.1| Photosystem I assembly
protein Ycf3 [Medicago truncatula]
Length = 160
Score = 108 bits (270), Expect(2) = 5e-23
Identities = 51/58 (87%), Positives = 53/58 (91%)
Frame = +2
Query: 512 RKGITYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRVE 685
R +TYSDRGEQAIRQGDSEIAE+WFDQAAEYWKQAIALTPGNYIEA NWLKIT R E
Sbjct: 103 RNLLTYSDRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLKITGRFE 160
Score = 26.2 bits (56), Expect(2) = 5e-23
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1
Query: 478 RMR*ETLKYGSKERNHL 528
RM ETLKYGSK RN L
Sbjct: 90 RMSQETLKYGSKGRNLL 106
>ref|XP_003620942.1| Photosystem I assembly protein Ycf3 [Medicago truncatula]
gi|355495957|gb|AES77160.1| Photosystem I assembly
protein Ycf3 [Medicago truncatula]
Length = 70
Score = 108 bits (270), Expect(2) = 2e-22
Identities = 51/58 (87%), Positives = 53/58 (91%)
Frame = +2
Query: 512 RKGITYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRVE 685
R +TYSDRGEQAIRQGDSEIAE+WFDQAAEYWKQAIALTPGNYIEA NWLKIT R E
Sbjct: 13 RNLLTYSDRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLKITGRFE 70
Score = 24.3 bits (51), Expect(2) = 2e-22
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1
Query: 490 ETLKYGSKERNHL 528
ETLKYGSK RN L
Sbjct: 4 ETLKYGSKGRNLL 16
>ref|XP_003605620.1| Photosystem I assembly protein Ycf3 [Medicago truncatula]
gi|355506675|gb|AES87817.1| Photosystem I assembly
protein Ycf3 [Medicago truncatula]
Length = 201
Score = 105 bits (261), Expect(2) = 6e-22
Identities = 50/58 (86%), Positives = 52/58 (89%)
Frame = +2
Query: 512 RKGITYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRVE 685
R +T SDRGEQAIRQGDSEIAE+WFDQAAEYWKQAIALTPGNYIEA NWLKIT R E
Sbjct: 144 RNLLTNSDRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLKITGRFE 201
Score = 26.2 bits (56), Expect(2) = 6e-22
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1
Query: 478 RMR*ETLKYGSKERNHL 528
RM ETLKYGSK RN L
Sbjct: 131 RMSQETLKYGSKGRNLL 147
>ref|XP_006841200.1| hypothetical protein AMTR_s00334p00015220 [Amborella trichopoda]
gi|548843107|gb|ERN02875.1| hypothetical protein
AMTR_s00334p00015220 [Amborella trichopoda]
Length = 70
Score = 108 bits (271), Expect = 2e-21
Identities = 54/67 (80%), Positives = 56/67 (83%)
Frame = +2
Query: 485 GRKLSSTVLRKGITYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWL 664
GR LS+ YSDRGEQAIRQGDSEIAEAWFDQAAEYWKQA+ALTPGNYIEA NWL
Sbjct: 12 GRNLSA--------YSDRGEQAIRQGDSEIAEAWFDQAAEYWKQALALTPGNYIEAQNWL 63
Query: 665 KITRRVE 685
KITRR E
Sbjct: 64 KITRRFE 70
>ref|YP_006503792.1| photosystem I assembly protein Ycf3 (chloroplast) [Datura
stramonium] gi|350996427|gb|AEQ36939.1| photosystem I
assembly protein Ycf3 (chloroplast) [Datura stramonium]
gi|350996579|gb|AEQ37090.1| photosystem I assembly
protein Ycf3 [Datura stramonium]
Length = 170
Score = 108 bits (269), Expect = 3e-21
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = +2
Query: 527 YSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRVE 685
YS RGEQAI+QGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRR E
Sbjct: 118 YSGRGEQAIQQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 170
>ref|YP_008963481.1| hypothetical chloroplast RF34 (chloroplast) [Penthorum chinense]
gi|403226782|gb|AFR25661.1| hypothetical chloroplast
RF34 (chloroplast) [Penthorum chinense]
Length = 169
Score = 105 bits (263), Expect = 1e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 536 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRVE 685
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRR E
Sbjct: 120 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 169
>gb|AFK81300.1| hypothetical chloroplast RF34 [Camellia sinensis var. assamica]
Length = 168
Score = 105 bits (263), Expect = 1e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 536 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRVE 685
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRR E
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>gb|AGW04976.1| photosystem I assembly protein [Vincetoxicum rossicum]
Length = 168
Score = 105 bits (263), Expect = 1e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 536 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRVE 685
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRR E
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>gb|AGW04519.1| photosystem I assembly protein [Eustegia minuta]
Length = 168
Score = 105 bits (263), Expect = 1e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 536 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRVE 685
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRR E
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>ref|YP_008592489.1| photosystem I assembly protein Ycf3 (chloroplast) [Andrographis
paniculata] gi|532164837|gb|AGT79847.1| photosystem I
assembly protein Ycf3 (chloroplast) [Andrographis
paniculata]
Length = 168
Score = 105 bits (263), Expect = 1e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 536 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRVE 685
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRR E
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>gb|AGQ50350.1| hypothetical chloroplast RF34 (chloroplast) [Rumex acetosa]
Length = 169
Score = 105 bits (263), Expect = 1e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 536 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRVE 685
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRR E
Sbjct: 120 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 169
>ref|YP_007890374.1| hypothetical chloroplast RF34 (chloroplast) [Ardisia polysticta]
gi|456367971|gb|AGG36885.1| hypothetical chloroplast
RF34 (chloroplast) [Ardisia polysticta]
Length = 169
Score = 105 bits (263), Expect = 1e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 536 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRVE 685
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRR E
Sbjct: 120 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 169
>ref|YP_008578540.1| photosystem I assembly protein (chloroplast) [Asclepias nivea]
gi|545907193|ref|YP_008578625.1| photosystem I assembly
protein (chloroplast) [Asclepias syriaca]
gi|326200282|gb|ADZ52321.1| photosystem I assembly
protein [Asclepias syriaca] gi|355331725|gb|AER52414.1|
photosystem I assembly protein [Asclepias albicans]
gi|355331808|gb|AER52496.1| photosystem I assembly
protein [Asclepias albicans] gi|355331974|gb|AER52660.1|
photosystem I assembly protein [Asclepias cutleri]
gi|355332057|gb|AER52742.1| photosystem I assembly
protein [Asclepias cutleri] gi|355332139|gb|AER52823.1|
photosystem I assembly protein [Asclepias leptopus]
gi|355332382|gb|AER53063.1| photosystem I assembly
protein [Asclepias masonii] gi|355332465|gb|AER53145.1|
photosystem I assembly protein [Asclepias subaphylla]
gi|355332548|gb|AER53227.1| photosystem I assembly
protein [Asclepias subaphylla]
gi|355332627|gb|AER53305.1| photosystem I assembly
protein [Asclepias subulata] gi|355332710|gb|AER53387.1|
photosystem I assembly protein [Asclepias subulata]
gi|355332793|gb|AER53469.1| photosystem I assembly
protein [Asclepias albicans x Asclepias subulata]
gi|544186340|gb|AGW04288.1| photosystem I assembly
protein [Secamone afzelii] gi|544186418|gb|AGW04365.1|
photosystem I assembly protein [Araujia sericifera]
gi|544186496|gb|AGW04442.1| photosystem I assembly
protein [Astephanus triflorus]
gi|544186647|gb|AGW04591.1| photosystem I assembly
protein [Marsdenia astephanoides]
gi|544186803|gb|AGW04745.1| photosystem I assembly
protein [Orthosia scoparia] gi|544187109|gb|AGW05047.1|
photosystem I assembly protein (chloroplast) [Asclepias
nivea] gi|544187210|gb|AGW05138.1| photosystem I
assembly protein (chloroplast) [Asclepias syriaca]
Length = 168
Score = 105 bits (263), Expect = 1e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 536 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRVE 685
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRR E
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>gb|ADD30872.1| putative RF3 protein [Heuchera sanguinea]
Length = 168
Score = 105 bits (263), Expect = 1e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 536 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRVE 685
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRR E
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>gb|ADD30856.1| putative RF3 protein [Dillenia indica]
Length = 168
Score = 105 bits (263), Expect = 1e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 536 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRVE 685
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRR E
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>ref|YP_004935667.1| ycf3 gene product (chloroplast) [Sesamum indicum]
gi|558603867|ref|YP_008815938.1| photosystem I assembly
protein Ycf3 (chloroplast) [Lindenbergia philippensis]
gi|575669211|ref|YP_008964868.1| photosystem I assembly
protein Ycf3 (chloroplast) [Schwalbea americana]
gi|290488940|gb|ADD30854.1| putative RF3 protein
[Antirrhinum majus] gi|347448296|gb|AEO92707.1|
photosystem I assembly protein Ycf3 (chloroplast)
[Sesamum indicum] gi|496538602|gb|AGL45337.1| Ycf3
(chloroplast) [Sesamum indicum]
gi|557136864|emb|CDI43919.1| photosystem I assembly
protein Ycf3 (chloroplast) [Lindenbergia philippensis]
gi|560176701|emb|CDJ38620.1| photosystem I assembly
protein Ycf3 (chloroplast) [Schwalbea americana]
gi|576598280|gb|AHH30442.1| hypothetical chloroplast RF3
(chloroplast) [Bartsia inaequalis]
Length = 168
Score = 105 bits (263), Expect = 1e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 536 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRVE 685
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRR E
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>ref|YP_001936518.2| photosystem I assembly protein ycf3 [Fagopyrum esculentum subsp.
ancestrale]
Length = 168
Score = 105 bits (263), Expect = 1e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 536 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRVE 685
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRR E
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>gb|ABY79733.1| photosystem I assembly protein ycf3 [Fagopyrum esculentum subsp.
ancestrale]
Length = 130
Score = 105 bits (263), Expect = 1e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 536 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRVE 685
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRR E
Sbjct: 81 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 130
>ref|YP_001837361.1| photosystem I assembly protein Ycf3 [Guizotia abyssinica]
gi|179366257|gb|ACB86528.1| hypothetical chloroplast
RF34 [Guizotia abyssinica]
Length = 168
Score = 105 bits (263), Expect = 1e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 536 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRVE 685
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRR E
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>ref|YP_778493.1| photosystem I assembly protein Ycf3 [Jasminum nudiflorum]
gi|122164970|sp|Q06RC8.1|YCF3_JASNU RecName:
Full=Photosystem I assembly protein Ycf3
gi|110456226|gb|ABG74631.1| YCF3 protein [Jasminum
nudiflorum]
Length = 168
Score = 105 bits (263), Expect = 1e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 536 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRVE 685
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRR E
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168