BLASTX nr result

ID: Sinomenium21_contig00021543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00021543
         (398 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC78894.1| hypothetical protein (mitochondrion) [Vicia faba]...   108   6e-22
gb|EXB29791.1| hypothetical protein L484_008955 [Morus notabilis]      79   2e-17
ref|XP_003588306.1| Ribosomal protein S3 [Medicago truncatula] g...    73   5e-11
ref|XP_002531802.1| conserved hypothetical protein [Ricinus comm...    59   9e-07

>gb|AGC78894.1| hypothetical protein (mitochondrion) [Vicia faba]
           gi|442803272|gb|AGC79007.1| hypothetical protein
           (mitochondrion) [Vicia faba]
          Length = 602

 Score =  108 bits (271), Expect = 6e-22
 Identities = 53/59 (89%), Positives = 53/59 (89%)
 Frame = +1

Query: 220 MGQRIKRFDFVPRDPPQVGFESRVMGDYPARFGEHL*SALVNGSPPIKQERSGSSHGGV 396
           MGQRIKRFDFV RD PQVGFESRVMGDYPARFGEH  SALVNGSP IKQERSG SHGGV
Sbjct: 1   MGQRIKRFDFVSRDSPQVGFESRVMGDYPARFGEHFLSALVNGSPSIKQERSGYSHGGV 59


>gb|EXB29791.1| hypothetical protein L484_008955 [Morus notabilis]
          Length = 69

 Score = 79.3 bits (194), Expect(2) = 2e-17
 Identities = 33/37 (89%), Positives = 35/37 (94%)
 Frame = -3

Query: 354 GASIHQRRLQVLSEPCWIVTHHTALKPNLWWIPGDKV 244
           GASIHQRRL+VLSEPCWIVTHHTALKPNLWWIP D +
Sbjct: 17  GASIHQRRLKVLSEPCWIVTHHTALKPNLWWIPADVI 53



 Score = 35.4 bits (80), Expect(2) = 2e-17
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -1

Query: 398 VTPPWEEPLLSCLMGG 351
           VTPPWEEPLLSCL+ G
Sbjct: 2   VTPPWEEPLLSCLIVG 17


>ref|XP_003588306.1| Ribosomal protein S3 [Medicago truncatula]
           gi|355477354|gb|AES58557.1| Ribosomal protein S3
           [Medicago truncatula]
          Length = 306

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 39/59 (66%), Positives = 39/59 (66%)
 Frame = +1

Query: 220 MGQRIKRFDFVPRDPPQVGFESRVMGDYPARFGEHL*SALVNGSPPIKQERSGSSHGGV 396
           MGQRIKRFDFV RD PQVGFESRVMGDYPARFGE                 SG SHGGV
Sbjct: 1   MGQRIKRFDFVSRDSPQVGFESRVMGDYPARFGE-----------------SGYSHGGV 42


>ref|XP_002531802.1| conserved hypothetical protein [Ricinus communis]
           gi|223528568|gb|EEF30590.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 72

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/59 (55%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = -3

Query: 363 LDGGASIHQRRLQVLSEPCWIVTHHTALKPNLW-WIPGDKVKALDPLPHTLRCSSPPIK 190
           L  G SI Q RL+VL EPC I+T++T           GD VKALDPLPHTL+ SS PIK
Sbjct: 14  LTRGPSIQQCRLKVLCEPCRIITYYTTHSSQTCDGSQGDNVKALDPLPHTLKGSSTPIK 72


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