BLASTX nr result
ID: Sinomenium21_contig00021368
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00021368
(662 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup9... 244 2e-62
ref|XP_007023385.1| Suppressor of auxin resistance 3 [Theobroma ... 231 2e-58
ref|XP_006465209.1| PREDICTED: nuclear pore complex protein Nup9... 226 4e-57
ref|XP_006427580.1| hypothetical protein CICLE_v10024784mg [Citr... 222 9e-56
ref|XP_007220283.1| hypothetical protein PRUPE_ppa000667mg [Prun... 204 2e-50
ref|XP_002527319.1| nucleoporin, putative [Ricinus communis] gi|... 204 3e-50
gb|EXB67202.1| Nuclear pore complex protein [Morus notabilis] 203 4e-50
ref|XP_004491602.1| PREDICTED: nuclear pore complex protein Nup9... 196 7e-48
ref|XP_007142513.1| hypothetical protein PHAVU_008G287100g [Phas... 181 1e-43
ref|XP_004301585.1| PREDICTED: nuclear pore complex protein Nup9... 181 1e-43
ref|XP_003544079.1| PREDICTED: nuclear pore complex protein Nup9... 180 3e-43
ref|XP_003618002.1| Nuclear pore complex protein Nup98-Nup96 [Me... 179 7e-43
dbj|BAO49746.1| nuclear pore complex protein Nup96a [Nicotiana b... 176 8e-42
ref|XP_002303836.1| PRECOCIOUS family protein [Populus trichocar... 174 2e-41
gb|AAF14656.1|AC011713_4 Identical to gi|1297187 nucleoprotein 9... 173 5e-41
ref|NP_178183.2| suppressor of auxin resistance 3 [Arabidopsis t... 173 5e-41
ref|XP_002889279.1| hypothetical protein ARALYDRAFT_895920 [Arab... 172 7e-41
gb|AAN03675.1|AF411838_1 putative nucleoporin PRECOZ [Arabidopsi... 172 1e-40
ref|XP_006300673.1| hypothetical protein CARUB_v10019705mg [Caps... 171 1e-40
ref|XP_006341370.1| PREDICTED: nuclear pore complex protein Nup9... 170 3e-40
>ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup98-Nup96 [Vitis
vinifera]
Length = 1041
Score = 244 bits (623), Expect = 2e-62
Identities = 127/221 (57%), Positives = 155/221 (70%), Gaps = 1/221 (0%)
Frame = -3
Query: 660 ILRVRSSDLKRKELTDVVKKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXXXX 481
+L++RSS + L D+V+KL+ T+RQGA FISF+P +GEWKFLVHHFSRFGL+
Sbjct: 136 VLQIRSSSFEEGRLNDIVEKLRLCTKRQGADFISFNPSNGEWKFLVHHFSRFGLSEDDEE 195
Query: 480 XXXXXXVTRAQHSGEIDDDEVSEIAEEARFDPDETALSHSLPAHLGLDPIKMQEMRMLMF 301
VT QH E + EVS+I E +P+ LSHSLPAHLGLDPIKM+EMRM+MF
Sbjct: 196 DIAMDDVTVVQHPLETNAHEVSDIDEATLVEPNGAVLSHSLPAHLGLDPIKMKEMRMVMF 255
Query: 300 PVDEEAE-SFEGPFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEYNVAG 124
PVDEE + F G F QSF K +IRP L+YSA +M+H+S R+TP+ LLEYN
Sbjct: 256 PVDEEEDHDFSGEFKQREQSFNKEYIRPPLHYSARRMSHKSGSSVARKTPLALLEYNPGS 315
Query: 123 SHSSPTGNILMSWQNKGMPIKTAKVEGFKLDLKCETPITGS 1
SS +G ILM+ QNKGMP+KT KVEGFKLDLK ETPIT S
Sbjct: 316 VDSSSSGTILMAQQNKGMPLKTTKVEGFKLDLKHETPITES 356
>ref|XP_007023385.1| Suppressor of auxin resistance 3 [Theobroma cacao]
gi|508778751|gb|EOY26007.1| Suppressor of auxin
resistance 3 [Theobroma cacao]
Length = 1069
Score = 231 bits (588), Expect = 2e-58
Identities = 122/222 (54%), Positives = 154/222 (69%), Gaps = 3/222 (1%)
Frame = -3
Query: 657 LRVRSSDLKRKELTDVVKKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXXXXX 478
L+++ L+++E+ +VKKL S RQGA FI+FDP +GEWKFLV HFSRFGL+
Sbjct: 161 LQLKHLILEKQEVDGIVKKLGESMTRQGAQFIAFDPANGEWKFLVDHFSRFGLSEDEEED 220
Query: 477 XXXXXVTRA-QHSGEIDDDEVSEIAEEARFDPDETALSHSLPAHLGLDPIKMQEMRMLMF 301
T Q GE++ E I E+ + D + LSHSLPAHLGLDP+KM+EMRMLMF
Sbjct: 221 IIMDDATGVVQDPGEMNGGENCGIDEDMQIDTNGLVLSHSLPAHLGLDPLKMKEMRMLMF 280
Query: 300 PVDEEAE--SFEGPFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEYNVA 127
PV+EE E F G SH++ +FGK +IR L+ S +M+HRSSPP VR+TPV LLEYN
Sbjct: 281 PVEEEEEIEDFRGAASHQKPAFGKEYIRSPLHNSNQRMSHRSSPPVVRKTPVALLEYNSG 340
Query: 126 GSHSSPTGNILMSWQNKGMPIKTAKVEGFKLDLKCETPITGS 1
SS +GN+LM +NKGMP+KT K EGFKLDLK ETP+TGS
Sbjct: 341 NFDSSSSGNVLMVQENKGMPLKTVKKEGFKLDLKQETPVTGS 382
>ref|XP_006465209.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Citrus
sinensis]
Length = 1041
Score = 226 bits (577), Expect = 4e-57
Identities = 119/218 (54%), Positives = 148/218 (67%)
Frame = -3
Query: 654 RVRSSDLKRKELTDVVKKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXXXXXX 475
R S LK + D VKK++ TERQGA F+SFDP+SGEWKFLV HFSRFGL+
Sbjct: 138 RYLSLKLKEGDSDDFVKKMKERTERQGARFVSFDPVSGEWKFLVVHFSRFGLSDDEEDDI 197
Query: 474 XXXXVTRAQHSGEIDDDEVSEIAEEARFDPDETALSHSLPAHLGLDPIKMQEMRMLMFPV 295
T Q+S E++ EVS++ EE + D LSHSLPAHLGLDPIKM+EMRM+MF
Sbjct: 198 MMDDATPVQNSLEMNGGEVSDVDEETQMDLSGPELSHSLPAHLGLDPIKMKEMRMVMFQE 257
Query: 294 DEEAESFEGPFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEYNVAGSHS 115
+EE + F G S +++S GK +IRP L +A +M+ RSS P R+TPV LLEY+ S S
Sbjct: 258 EEEIDDFSGTPSRQQRSLGKEYIRPPLQNTAQRMSQRSSSPLARKTPVGLLEYHPGNSDS 317
Query: 114 SPTGNILMSWQNKGMPIKTAKVEGFKLDLKCETPITGS 1
G ILM+ QNKGMP+K K +GFKLDLK ETP+TGS
Sbjct: 318 DSPGMILMAQQNKGMPLKKLKSDGFKLDLKHETPVTGS 355
>ref|XP_006427580.1| hypothetical protein CICLE_v10024784mg [Citrus clementina]
gi|557529570|gb|ESR40820.1| hypothetical protein
CICLE_v10024784mg [Citrus clementina]
Length = 1041
Score = 222 bits (565), Expect = 9e-56
Identities = 117/218 (53%), Positives = 147/218 (67%)
Frame = -3
Query: 654 RVRSSDLKRKELTDVVKKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXXXXXX 475
R S LK + D VKK++ TERQGA F+SFDP+SGEWKFLV HFSRFGL+
Sbjct: 138 RYLSLKLKEGDSDDFVKKMKERTERQGARFVSFDPVSGEWKFLVVHFSRFGLSDEEEDDI 197
Query: 474 XXXXVTRAQHSGEIDDDEVSEIAEEARFDPDETALSHSLPAHLGLDPIKMQEMRMLMFPV 295
T Q+S E++ EVS++ EE + D LSHSLPAHLGLDP+KM+EMRM+MF
Sbjct: 198 MMDDATPVQNSLEMNGGEVSDVDEETQMDLSGPELSHSLPAHLGLDPLKMKEMRMVMFQE 257
Query: 294 DEEAESFEGPFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEYNVAGSHS 115
+EE + F G S ++ S GK +IRP L +A +M+ RSS P R+TPV LLEY+ S S
Sbjct: 258 EEEIDDFSGTPSWQQWSLGKEYIRPPLQNTAQRMSQRSSSPLARKTPVGLLEYHPGNSDS 317
Query: 114 SPTGNILMSWQNKGMPIKTAKVEGFKLDLKCETPITGS 1
G ILM+ Q+KGMP+K K +GFKLDLK ETP+TGS
Sbjct: 318 DSPGMILMAQQDKGMPLKKLKSDGFKLDLKHETPVTGS 355
>ref|XP_007220283.1| hypothetical protein PRUPE_ppa000667mg [Prunus persica]
gi|462416745|gb|EMJ21482.1| hypothetical protein
PRUPE_ppa000667mg [Prunus persica]
Length = 1042
Score = 204 bits (519), Expect = 2e-50
Identities = 109/219 (49%), Positives = 144/219 (65%), Gaps = 1/219 (0%)
Frame = -3
Query: 660 ILRVRSSDLKRKELTDVVKKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXXXX 481
+L+ R S++ +++ + VKKL+ E QGA FISF+P +GEWKF VHHFSRFGL+
Sbjct: 136 VLQTRPSNMDKRQKDNSVKKLRQIVEGQGAQFISFNPENGEWKFFVHHFSRFGLSEDDEE 195
Query: 480 XXXXXXVTRAQHSGEIDDDEVSEIAEEARFDPDETALSHSLPAHLGLDPIKMQEMRMLMF 301
AQ E++ E+S+ EE + DP LSHSLPAHLGLDP+KM+EMRMLMF
Sbjct: 196 DIMMEDAAAAQDLVEMNHGEISDADEETQMDPTGIVLSHSLPAHLGLDPVKMKEMRMLMF 255
Query: 300 P-VDEEAESFEGPFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEYNVAG 124
P +EEAE +H SFG+ +IRP L ++ +M+ RS+PP VR+TP+ LLEY
Sbjct: 256 PDGEEEAEELNQVPAHYNPSFGREYIRPPLQNTSQRMSDRSTPPPVRKTPLALLEYKHGS 315
Query: 123 SHSSPTGNILMSWQNKGMPIKTAKVEGFKLDLKCETPIT 7
S+ G ILM+ +NK +P K K EGFKLDLK ETP+T
Sbjct: 316 FDSNSPGAILMAQENKVIPTKILK-EGFKLDLKHETPVT 353
>ref|XP_002527319.1| nucleoporin, putative [Ricinus communis]
gi|223533319|gb|EEF35071.1| nucleoporin, putative
[Ricinus communis]
Length = 1067
Score = 204 bits (518), Expect = 3e-50
Identities = 109/221 (49%), Positives = 148/221 (66%), Gaps = 2/221 (0%)
Frame = -3
Query: 657 LRVRSSDLKRKELTDVVKKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXXXXX 478
L++R SDL +++L + VKKL+ S RQGA FISF P +G+WKFLV+HFSRFGL+
Sbjct: 162 LQIRLSDLNKRQLNNAVKKLKESAARQGAYFISFHPENGQWKFLVNHFSRFGLSDDEEED 221
Query: 477 XXXXXVTRAQHSGEIDDDEVSEIAEEARFDPDETALSHSLPAHLGLDPIKMQEMRMLMFP 298
V + E+ + + DP L HSLPAHLGLDP+KM+EMRMLMFP
Sbjct: 222 IAMDDVVAVEEPIEMGGTPETNEETQVELDPTGPMLYHSLPAHLGLDPVKMKEMRMLMFP 281
Query: 297 VDEE--AESFEGPFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEYNVAG 124
V+EE E F GP S ++ S GK HI+ +L+ S+ K++ RS+ P +R+ P+ LL+Y +
Sbjct: 282 VEEEEEVEHFNGP-SRQKLSSGKEHIKHSLHNSSQKISQRSNTPVMRKMPLALLDYRPSS 340
Query: 123 SHSSPTGNILMSWQNKGMPIKTAKVEGFKLDLKCETPITGS 1
+SS G ILM+ QNKG+P+KT K EGFKL+L+ ETP+TGS
Sbjct: 341 FNSSSPGAILMAQQNKGLPLKTVKGEGFKLNLEHETPMTGS 381
>gb|EXB67202.1| Nuclear pore complex protein [Morus notabilis]
Length = 948
Score = 203 bits (516), Expect = 4e-50
Identities = 113/222 (50%), Positives = 141/222 (63%), Gaps = 2/222 (0%)
Frame = -3
Query: 660 ILRVRSSDLKRKELTDVVKKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXXXX 481
+LR+ S+++K + +KL+ ST+RQGA FISFDP +GEWKFL HHFSRFGL+
Sbjct: 158 VLRLTSANVKEGRKEIIEEKLRRSTDRQGAQFISFDPENGEWKFLAHHFSRFGLSEDDEE 217
Query: 480 XXXXXXVT-RAQHSGEIDDDEVSEIAEEARFDPDETALSHSLPAHLGLDPIKMQEMRMLM 304
T AQ +++ DEV ++ EEA D LSHSLPAHLGLDP+KM EMRMLM
Sbjct: 218 DITMDDATPAAQEPVDMNGDEVLDVDEEAELDHSGGLLSHSLPAHLGLDPVKMNEMRMLM 277
Query: 303 FPVDEE-AESFEGPFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEYNVA 127
F +EE E F + ++ SFGK P L P M HRSSPP VR+TP+ LLEY
Sbjct: 278 FRDEEEDMEDFNHTHARQKPSFGKDSAWPFLQNLTP-MNHRSSPPIVRKTPLALLEYKHG 336
Query: 126 GSHSSPTGNILMSWQNKGMPIKTAKVEGFKLDLKCETPITGS 1
S+ G IL++ QNK P+K K EGFKLDL ETP+TGS
Sbjct: 337 SFDSNTPGTILLAQQNKTTPLKKLKTEGFKLDLMHETPVTGS 378
>ref|XP_004491602.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
[Cicer arietinum] gi|502099969|ref|XP_004491603.1|
PREDICTED: nuclear pore complex protein Nup98-Nup96-like
isoform X2 [Cicer arietinum]
Length = 1022
Score = 196 bits (497), Expect = 7e-48
Identities = 108/222 (48%), Positives = 141/222 (63%), Gaps = 2/222 (0%)
Frame = -3
Query: 660 ILRVRSSDLKRKELTDVV--KKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXX 487
+L + S LK KE DVV KKL+ ERQGA FISFDP++ EWKF+V HFSRFG
Sbjct: 132 VLVLDSGKLKSKECWDVVLVKKLKQCAERQGAQFISFDPVTCEWKFIVDHFSRFGFGDDD 191
Query: 486 XXXXXXXXVTRAQHSGEIDDDEVSEIAEEARFDPDETALSHSLPAHLGLDPIKMQEMRML 307
+ +DD E ++ +E+ + DE LSHSLPAHL LDP+KM++MR+L
Sbjct: 192 ------------EEDAVMDDAEAHDVEKESPTNVDEIELSHSLPAHLRLDPVKMRDMRLL 239
Query: 306 MFPVDEEAESFEGPFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEYNVA 127
MFP +EE E + SFGK H+RP N S+ + +R++PP VR TP PLLEY
Sbjct: 240 MFPNEEEMEDLG-----RKSSFGKEHVRPLKN-SSQSVANRATPPVVRNTPFPLLEYKHG 293
Query: 126 GSHSSPTGNILMSWQNKGMPIKTAKVEGFKLDLKCETPITGS 1
S+ G+ILM Q+KGMP++T K +GFKLDLK ETP++GS
Sbjct: 294 SLDSNSPGSILMVQQHKGMPLRTVKAQGFKLDLKHETPVSGS 335
>ref|XP_007142513.1| hypothetical protein PHAVU_008G287100g [Phaseolus vulgaris]
gi|593566839|ref|XP_007142514.1| hypothetical protein
PHAVU_008G287100g [Phaseolus vulgaris]
gi|561015646|gb|ESW14507.1| hypothetical protein
PHAVU_008G287100g [Phaseolus vulgaris]
gi|561015647|gb|ESW14508.1| hypothetical protein
PHAVU_008G287100g [Phaseolus vulgaris]
Length = 1022
Score = 181 bits (460), Expect = 1e-43
Identities = 104/222 (46%), Positives = 137/222 (61%), Gaps = 2/222 (0%)
Frame = -3
Query: 660 ILRVRSSDLKRKELTD--VVKKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXX 487
+L V LK KE + +V KL+ TERQ A FISFD ++GEWKFLV HFSRFG
Sbjct: 132 VLVVDGEILKSKEGKEAVIVNKLKQITERQEAQFISFDLVTGEWKFLVEHFSRFGFGDDD 191
Query: 486 XXXXXXXXVTRAQHSGEIDDDEVSEIAEEARFDPDETALSHSLPAHLGLDPIKMQEMRML 307
+ +DD EV ++ +E+ + +E LSHSLP+HL LDP+KM+EMR+L
Sbjct: 192 ------------EEDIVMDDAEVYDVEKESPSNTNEVELSHSLPSHLRLDPVKMREMRLL 239
Query: 306 MFPVDEEAESFEGPFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEYNVA 127
MFP DEE E S ++Q ++RP L SA + HRS+PP R+TP PLLEY
Sbjct: 240 MFPDDEEVEDLSRKSSSDKQ-----YVRP-LQSSAQVVNHRSTPPVARKTPFPLLEYKHG 293
Query: 126 GSHSSPTGNILMSWQNKGMPIKTAKVEGFKLDLKCETPITGS 1
S+ G ILM Q+KGMP++T K +GF LDLK ETP++G+
Sbjct: 294 NFDSNSPGGILMVQQHKGMPLRTVKSQGFNLDLKHETPVSGN 335
>ref|XP_004301585.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Fragaria
vesca subsp. vesca]
Length = 1089
Score = 181 bits (460), Expect = 1e-43
Identities = 104/219 (47%), Positives = 139/219 (63%), Gaps = 1/219 (0%)
Frame = -3
Query: 660 ILRVRSSDLKRKELTDVVKKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXXXX 481
+L+ R + ++++ +VK L+ S E QGA F+SF+P +GEWKF V+HFSRFGL
Sbjct: 188 MLQTRLPCVDQRQIEHIVKILRHSVEGQGAHFVSFNPENGEWKFFVNHFSRFGLIDEDEE 247
Query: 480 XXXXXXVTRAQHSGEIDDDEVSEIAEEARFDPDETALSHSLPAHLGLDPIKMQEMRMLMF 301
+ E++ DE+ + E + D T L HSLPAHLGLDPIKMQEMRMLMF
Sbjct: 248 DMMMEDTDVGEDPPELNHDEMFD--EGNQMDRTGTVLLHSLPAHLGLDPIKMQEMRMLMF 305
Query: 300 -PVDEEAESFEGPFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEYNVAG 124
+EEAE F+ SH SFGK + R L +A +++HRSSPP VR+TP+ LL Y
Sbjct: 306 SDAEEEAEDFKESPSHYNPSFGKDYSRSPLQ-NAQRISHRSSPPAVRKTPLALLGYKHGS 364
Query: 123 SHSSPTGNILMSWQNKGMPIKTAKVEGFKLDLKCETPIT 7
S+ G ILM+ +NK +P+KT K EGFKLDL +TP+T
Sbjct: 365 FDSNSPGAILMAQENKALPLKTLK-EGFKLDLSRDTPVT 402
>ref|XP_003544079.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
[Glycine max] gi|571506071|ref|XP_006595657.1|
PREDICTED: nuclear pore complex protein Nup98-Nup96-like
isoform X2 [Glycine max]
Length = 1022
Score = 180 bits (457), Expect = 3e-43
Identities = 104/222 (46%), Positives = 139/222 (62%), Gaps = 2/222 (0%)
Frame = -3
Query: 660 ILRVRSSDLKRKELTD--VVKKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXX 487
+L + S LK KE + +V KL+ T+RQ A FISFD ++GEWKFLV HFSRFG
Sbjct: 132 VLVLDSEILKSKEGKEDVMVSKLKQITKRQKAQFISFDLVTGEWKFLVGHFSRFGFGDDD 191
Query: 486 XXXXXXXXVTRAQHSGEIDDDEVSEIAEEARFDPDETALSHSLPAHLGLDPIKMQEMRML 307
+ +DD EV ++ +E+ + +E LSHSLP+HL LDP+KM+EMR+L
Sbjct: 192 ------------EEDIAMDDAEVYDVEKESPSNTNELELSHSLPSHLRLDPVKMREMRLL 239
Query: 306 MFPVDEEAESFEGPFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEYNVA 127
MFP +EE E + S GK ++RP L SA + HRS+PP R+TP PLLEY
Sbjct: 240 MFPDEEEVEDLSC-----KSSSGKQYVRP-LQSSAQAINHRSTPPVARKTPFPLLEYKHG 293
Query: 126 GSHSSPTGNILMSWQNKGMPIKTAKVEGFKLDLKCETPITGS 1
S+ G ILM Q+KGMP++T K +GFKLDLK ETP++G+
Sbjct: 294 NFDSNSPGGILMVQQHKGMPLRTIKSQGFKLDLKHETPVSGN 335
>ref|XP_003618002.1| Nuclear pore complex protein Nup98-Nup96 [Medicago truncatula]
gi|355519337|gb|AET00961.1| Nuclear pore complex protein
Nup98-Nup96 [Medicago truncatula]
Length = 1022
Score = 179 bits (454), Expect = 7e-43
Identities = 104/222 (46%), Positives = 133/222 (59%), Gaps = 2/222 (0%)
Frame = -3
Query: 660 ILRVRSSDLKRKELTD--VVKKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXX 487
++ + S LK KE + +VKKL+ STE QGA F+SFD ++ E K LV HFSRFG
Sbjct: 132 VMVLNSRKLKSKECRNDVLVKKLKQSTESQGARFVSFDLVTCELKILVEHFSRFGFDDDD 191
Query: 486 XXXXXXXXVTRAQHSGEIDDDEVSEIAEEARFDPDETALSHSLPAHLGLDPIKMQEMRML 307
+ +DD E ++ +E + DE LSHSLPAHL LDP+KM+EMR L
Sbjct: 192 ------------EEDAVMDDAETHDVEKELPINVDEIELSHSLPAHLRLDPVKMREMRSL 239
Query: 306 MFPVDEEAESFEGPFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEYNVA 127
MFP +EE E + SFGK +RP N SA +RS+PP VR TP PLLEY
Sbjct: 240 MFPDEEEMEDLG-----RKSSFGKESVRPLKN-SAQSAMNRSTPPTVRNTPFPLLEYKHG 293
Query: 126 GSHSSPTGNILMSWQNKGMPIKTAKVEGFKLDLKCETPITGS 1
S+ G+ILM Q+K MP++ K +GFKLDLK ETPI+GS
Sbjct: 294 NLESNSPGSILMVQQHKNMPLRAVKAQGFKLDLKQETPISGS 335
>dbj|BAO49746.1| nuclear pore complex protein Nup96a [Nicotiana benthamiana]
Length = 1037
Score = 176 bits (445), Expect = 8e-42
Identities = 102/223 (45%), Positives = 141/223 (63%), Gaps = 3/223 (1%)
Frame = -3
Query: 660 ILRVRSSDLKRKELT-DVVKKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXXX 484
+L++RSS + + ++V+KL+ TERQGA FISF+PL+GEWKF V HFSRFGL
Sbjct: 134 LLKMRSSKNSDVDSSREMVEKLRCRTERQGARFISFNPLNGEWKFSVQHFSRFGLMDDDE 193
Query: 483 XXXXXXXVT-RAQHSGEIDDDEVSEIAEEARFDPDETALSHSLPAHLGLDPIKMQEMRML 307
V+ Q +++ +VS I EEA + T LSHSLPAHLGLDP+KM+EMRML
Sbjct: 194 EDMIMDDVSPEVQDPVDMNGGDVSYIGEEATL-ANTTDLSHSLPAHLGLDPMKMKEMRML 252
Query: 306 MFPVDEE-AESFEGPFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEYNV 130
MFP +EE + + G S + F K + + P++ SPP R+TP+ L+EY
Sbjct: 253 MFPAEEEDVDDYHGRPSDRKSQFSKESSKSPFQHKYPRI----SPPLTRKTPLALIEYKH 308
Query: 129 AGSHSSPTGNILMSWQNKGMPIKTAKVEGFKLDLKCETPITGS 1
S G+IL++ QNKG+ +KT K EGFKLD++ +TPI+GS
Sbjct: 309 GSFGSDSPGSILLTQQNKGVLLKTTKAEGFKLDIRQQTPISGS 351
>ref|XP_002303836.1| PRECOCIOUS family protein [Populus trichocarpa]
gi|222841268|gb|EEE78815.1| PRECOCIOUS family protein
[Populus trichocarpa]
Length = 1067
Score = 174 bits (442), Expect = 2e-41
Identities = 97/221 (43%), Positives = 131/221 (59%), Gaps = 2/221 (0%)
Frame = -3
Query: 657 LRVRSSDLKRKELTDVVKKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXXXXX 478
L+++ D + + DVV+KL+ S ERQGA FISFDP+ GEWKFLV HFSRFGL+
Sbjct: 161 LKLKLLDFNKGRINDVVEKLRESMERQGAEFISFDPVIGEWKFLVCHFSRFGLSGDDEED 220
Query: 477 XXXXXVTRAQHSGEIDDDEVSEIAEEA--RFDPDETALSHSLPAHLGLDPIKMQEMRMLM 304
Q E+ E+ ++ EE + +E L HSLPAHLGLDP++M EMR M
Sbjct: 221 ITMDDAAEVQDPAEMKGGEIVDMDEETPEEVEANEPVLYHSLPAHLGLDPVRMNEMRTWM 280
Query: 303 FPVDEEAESFEGPFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEYNVAG 124
FP DEE + ++ + K I L S +M+HR+S P +R+TP+ LLEY
Sbjct: 281 FPDDEEEVVEDLIGLRQKFPYNKESIGSPLQNSTQRMSHRASSPVMRKTPLALLEYKPGS 340
Query: 123 SHSSPTGNILMSWQNKGMPIKTAKVEGFKLDLKCETPITGS 1
SS G IL++ Q+KG+ K K GF L+L+ ETPI+GS
Sbjct: 341 FDSSSPGTILLAQQHKGLTSKMMKGVGFTLNLEHETPISGS 381
>gb|AAF14656.1|AC011713_4 Identical to gi|1297187 nucleoprotein 98 homolog from Arabidopsis
thaliana cosmid gb|U53501. EST gb|W43800 comes from this
gene [Arabidopsis thaliana] gi|1297187|gb|AAA98914.1|
Theoretical protein with similarity to protein encoded
by GenBank Accession Number U41815, nucleoporin 98
[Arabidopsis thaliana]
Length = 850
Score = 173 bits (438), Expect = 5e-41
Identities = 97/210 (46%), Positives = 131/210 (62%), Gaps = 2/210 (0%)
Frame = -3
Query: 630 RKELTDVVKKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXXXXXXXXXXVTRA 451
++++ + KL+ STERQGA+FISFDP +G WKF V HFSRFGL+
Sbjct: 142 KQQVNHIAYKLKQSTERQGATFISFDPDNGLWKFFVPHFSRFGLSDDEAEDIAMDDAPGL 201
Query: 450 QHSGEIDDDEVSEIAEEARFDPDETALSHSLPAHLGLDPIKMQEMRMLMFPVDEEAES-- 277
+D +V++I EE + + E LSHSLPAHLGLDP KM+EMRMLMFP ++E ES
Sbjct: 202 GDPVGLDGKKVADIDEEDQMETSELELSHSLPAHLGLDPEKMKEMRMLMFPNEDEDESED 261
Query: 276 FEGPFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEYNVAGSHSSPTGNI 97
F SH S K ++RP+ A + +H+ PP VR+TP+ LLEYN SSP G+I
Sbjct: 262 FREQTSHLMTSLTKRNVRPSQKI-AQRNSHQDPPPVVRKTPLALLEYNPGNDKSSP-GSI 319
Query: 96 LMSWQNKGMPIKTAKVEGFKLDLKCETPIT 7
LM QNK + ++ +K GF+LD+ TP+T
Sbjct: 320 LMVQQNKNLAVRKSKTGGFELDISHVTPLT 349
>ref|NP_178183.2| suppressor of auxin resistance 3 [Arabidopsis thaliana]
gi|75156731|sp|Q8LLD0.1|NUP96_ARATH RecName:
Full=Nuclear pore complex protein Nup96 homolog;
Short=AtNUP96; AltName: Full=Nucleoporin 96; AltName:
Full=Nucleoporin PRECOCIOUS; AltName: Full=Nucleoporin
PRECOZ; AltName: Full=Protein MODIFIER OF SNC1 3;
AltName: Full=Protein SUPPRESSOR OF AUXIN RESISTANCE 3
gi|22652299|gb|AAN03676.1|AF411839_1 putative
nucleoporin PRECOZ [Arabidopsis thaliana]
gi|61353788|gb|AAX44044.1| putative nucleoporin 96
[Arabidopsis thaliana] gi|332198315|gb|AEE36436.1|
suppressor of auxin resistance 3 [Arabidopsis thaliana]
Length = 1046
Score = 173 bits (438), Expect = 5e-41
Identities = 97/210 (46%), Positives = 131/210 (62%), Gaps = 2/210 (0%)
Frame = -3
Query: 630 RKELTDVVKKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXXXXXXXXXXVTRA 451
++++ + KL+ STERQGA+FISFDP +G WKF V HFSRFGL+
Sbjct: 149 KQQVNHIAYKLKQSTERQGATFISFDPDNGLWKFFVPHFSRFGLSDDEAEDIAMDDAPGL 208
Query: 450 QHSGEIDDDEVSEIAEEARFDPDETALSHSLPAHLGLDPIKMQEMRMLMFPVDEEAES-- 277
+D +V++I EE + + E LSHSLPAHLGLDP KM+EMRMLMFP ++E ES
Sbjct: 209 GDPVGLDGKKVADIDEEDQMETSELELSHSLPAHLGLDPEKMKEMRMLMFPNEDEDESED 268
Query: 276 FEGPFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEYNVAGSHSSPTGNI 97
F SH S K ++RP+ A + +H+ PP VR+TP+ LLEYN SSP G+I
Sbjct: 269 FREQTSHLMTSLTKRNVRPSQKI-AQRNSHQDPPPVVRKTPLALLEYNPGNDKSSP-GSI 326
Query: 96 LMSWQNKGMPIKTAKVEGFKLDLKCETPIT 7
LM QNK + ++ +K GF+LD+ TP+T
Sbjct: 327 LMVQQNKNLAVRKSKTGGFELDISHVTPLT 356
>ref|XP_002889279.1| hypothetical protein ARALYDRAFT_895920 [Arabidopsis lyrata subsp.
lyrata] gi|297335120|gb|EFH65538.1| hypothetical protein
ARALYDRAFT_895920 [Arabidopsis lyrata subsp. lyrata]
Length = 1045
Score = 172 bits (437), Expect = 7e-41
Identities = 99/210 (47%), Positives = 132/210 (62%), Gaps = 3/210 (1%)
Frame = -3
Query: 627 KELTD-VVKKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXXXXXXXXXXVTRA 451
KE D + KL+ STERQGA+FISFDP +G WKFLV HFSRFGL+
Sbjct: 149 KERVDHIAYKLKQSTERQGATFISFDPDNGLWKFLVPHFSRFGLSDDEADDIAMDDAPGL 208
Query: 450 QHSGEIDDDEVSEIAEEARFDPDETALSHSLPAHLGLDPIKMQEMRMLMFPVD--EEAES 277
+D ++V++I EE + + E LSHSLPAHLGLDP KM+EMRMLMFP + +E+E
Sbjct: 209 GDPVGLDGNKVADIDEEDQMETSELELSHSLPAHLGLDPGKMKEMRMLMFPHEDVDESED 268
Query: 276 FEGPFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEYNVAGSHSSPTGNI 97
F SH S K ++RP+ S + +H+ PP VR+TP+ LLEYN G+ S G+I
Sbjct: 269 FREQTSHNMTSLTKRNVRPSQKIS-QRNSHQDPPPVVRKTPLALLEYN-PGNDKSSLGSI 326
Query: 96 LMSWQNKGMPIKTAKVEGFKLDLKCETPIT 7
LM QNK + ++ +K GF+LD+ TP+T
Sbjct: 327 LMVQQNKNLAVRKSKTGGFELDISHVTPLT 356
>gb|AAN03675.1|AF411838_1 putative nucleoporin PRECOZ [Arabidopsis thaliana]
Length = 1046
Score = 172 bits (435), Expect = 1e-40
Identities = 96/210 (45%), Positives = 131/210 (62%), Gaps = 2/210 (0%)
Frame = -3
Query: 630 RKELTDVVKKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXXXXXXXXXXVTRA 451
++++ + KL+ STERQGA+FISFDP +G WKF V HFSRFGL+
Sbjct: 149 KQQVNHIAYKLKQSTERQGATFISFDPDNGLWKFFVPHFSRFGLSDDEAEDIAMDDAPGL 208
Query: 450 QHSGEIDDDEVSEIAEEARFDPDETALSHSLPAHLGLDPIKMQEMRMLMFPVDEEAES-- 277
+D +V++I EE + + E LSHSLPAHLGLDP KM+EMRMLMFP ++E ES
Sbjct: 209 GDPVGLDGKKVADIDEEDQMETSELELSHSLPAHLGLDPEKMKEMRMLMFPNEDEDESED 268
Query: 276 FEGPFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEYNVAGSHSSPTGNI 97
F SH + K ++RP+ A + +H+ PP VR+TP+ LLEYN SSP G+I
Sbjct: 269 FREQTSHLMTALTKRNVRPSQKI-AQRNSHQDPPPVVRKTPLALLEYNPGNDKSSP-GSI 326
Query: 96 LMSWQNKGMPIKTAKVEGFKLDLKCETPIT 7
LM QNK + ++ +K GF+LD+ TP+T
Sbjct: 327 LMVQQNKNLAVRKSKTGGFELDISHVTPLT 356
>ref|XP_006300673.1| hypothetical protein CARUB_v10019705mg [Capsella rubella]
gi|482569383|gb|EOA33571.1| hypothetical protein
CARUB_v10019705mg [Capsella rubella]
Length = 1046
Score = 171 bits (434), Expect = 1e-40
Identities = 95/220 (43%), Positives = 137/220 (62%), Gaps = 2/220 (0%)
Frame = -3
Query: 660 ILRVRSSDLKRKELTDVVKKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXXXX 481
I+ + + L +++ + KL+ STERQGA+FISFDP G WKFLV HFSRFGL+
Sbjct: 139 IVNIPNLTLGNEQVDHIAYKLKQSTERQGATFISFDPDKGLWKFLVPHFSRFGLSDDEAE 198
Query: 480 XXXXXXVTRAQHSGEIDDDEVSEIAEEARFDPDETALSHSLPAHLGLDPIKMQEMRMLMF 301
+ D+V++I EE + + + LSHSLPAHLGLDP KM+EMRMLMF
Sbjct: 199 DIAMTDAPGLGDPVGQEGDKVADINEEHQMETSQPELSHSLPAHLGLDPGKMKEMRMLMF 258
Query: 300 PVD--EEAESFEGPFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEYNVA 127
P + +E++ F SH S K ++RP+ S + +H+ +PP +R+TP+ LLEYN
Sbjct: 259 PNEDLDESDDFGEQTSHHMASLTKQNVRPSQRIS-QRNSHQDTPPVLRKTPLALLEYNPV 317
Query: 126 GSHSSPTGNILMSWQNKGMPIKTAKVEGFKLDLKCETPIT 7
SSP G+ILM QNK + ++ +K+ GF+LD+ TP++
Sbjct: 318 NDKSSP-GSILMVQQNKNLAVRKSKMRGFELDISHGTPLS 356
>ref|XP_006341370.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Solanum
tuberosum]
Length = 1033
Score = 170 bits (431), Expect = 3e-40
Identities = 103/225 (45%), Positives = 139/225 (61%), Gaps = 5/225 (2%)
Frame = -3
Query: 660 ILRVRSSDLKRKELT-DVVKKLQSSTERQGASFISFDPLSGEWKFLVHHFSRFGLTXXXX 484
+L +RSS + + ++V+KL+ TERQGA FISFDP +GEWKF V HFSRFGL
Sbjct: 130 LLEIRSSKHYDVDSSRELVEKLRLRTERQGARFISFDPSNGEWKFFVQHFSRFGLNDEEE 189
Query: 483 XXXXXXXVTRAQHSGEIDDD--EVSEIAEEARFDPDETALSHSLPAHLGLDPIKMQEMRM 310
+ +D + +VS+I EE F + T LSHSLPAHLGLDP+KM+EMRM
Sbjct: 190 DEDMIIDAVSPEVQDPVDMNGGDVSDIDEET-FLANTTDLSHSLPAHLGLDPVKMKEMRM 248
Query: 309 LMFPVDEE-AESFEG-PFSHERQSFGKVHIRPTLNYSAPKMTHRSSPPNVRRTPVPLLEY 136
LMFP +EE + + G PF + Q F K + L + R SPP R+TP+ L+EY
Sbjct: 249 LMFPAEEEDIDDYHGVPFDRKPQ-FSKESSKSPLQHKF----QRVSPPLTRKTPLALIEY 303
Query: 135 NVAGSHSSPTGNILMSWQNKGMPIKTAKVEGFKLDLKCETPITGS 1
S G+IL++ QNKG+ +KT K EGFKLD++ +TPI+G+
Sbjct: 304 KHGSFGSDSPGSILLTQQNKGVLLKTTKTEGFKLDVRQQTPISGT 348